RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 HEXBP07686 556 aa2.66□□□□□ -1.98
VPS41-207ENST00000439468 KRT13P13646 458 aa2.66□□□□□ -1.98
VPS41-207ENST00000439468 DPP4P27487 766 aa2.66□□□□□ -1.98
VPS41-207ENST00000439468 RPL4P36578 427 aaKnown RBP2.66□□□□□ -1.98
VPS41-207ENST00000439468 ACVR1BP36896 505 aa2.66□□□□□ -1.98
VPS41-207ENST00000439468 MAGEA5P43359 124 aa2.66□□□□□ -1.98
VPS41-207ENST00000439468 NOVA1P51513 510 aaKnown RBP2.66□□□□□ -1.98
VPS41-207ENST00000439468 METAP1P53582 386 aa2.66□□□□□ -1.98
VPS41-207ENST00000439468 PLOD1Q02809 727 aaPredicted RBP2.66□□□□□ -1.98
VPS41-207ENST00000439468 MICAQ29983 383 aa2.66□□□□□ -1.98
VPS41-207ENST00000439468 C15orf32Q32M92 178 aa2.66□□□□□ -1.98
VPS41-207ENST00000439468 TIMM50Q3ZCQ8 353 aa2.66□□□□□ -1.98
VPS41-207ENST00000439468 HIGD2BQ4VC39 106 aa2.66□□□□□ -1.98
VPS41-207ENST00000439468 SLC25A30Q5SVS4 291 aa2.66□□□□□ -1.98
VPS41-207ENST00000439468 ARSKQ6UWY0 536 aa2.66□□□□□ -1.98
VPS41-207ENST00000439468 LANCL3Q6ZV70 420 aa2.66□□□□□ -1.98
VPS41-207ENST00000439468 PARGQ86W56 976 aa2.66□□□□□ -1.98
VPS41-207ENST00000439468 SLC39A11Q8N1S5 342 aa2.66□□□□□ -1.98
VPS41-207ENST00000439468 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.66□□□□□ -1.98
VPS41-207ENST00000439468 BEST4Q8NFU0 473 aa2.66□□□□□ -1.98
VPS41-207ENST00000439468 CNIH3Q8TBE1 160 aa2.66□□□□□ -1.98
VPS41-207ENST00000439468 M1APQ8TC57 530 aa2.66□□□□□ -1.98
VPS41-207ENST00000439468 ADAMTS16Q8TE57 1224 aa2.66□□□□□ -1.98
VPS41-207ENST00000439468 UPRTQ96BW1 309 aa2.66□□□□□ -1.98
VPS41-207ENST00000439468 C4orf36Q96KX1 117 aa2.66□□□□□ -1.98
VPS41-207ENST00000439468 FICDQ9BVA6 458 aa2.66□□□□□ -1.98
VPS41-207ENST00000439468 TM2D1Q9BX74 207 aa2.66□□□□□ -1.98
VPS41-207ENST00000439468 POLE3Q9NRF9 147 aa2.66□□□□□ -1.98
VPS41-207ENST00000439468 SLC35D1Q9NTN3 355 aa2.66□□□□□ -1.98
VPS41-207ENST00000439468 SH3BGRL2Q9UJC5 107 aa2.66□□□□□ -1.98
VPS41-207ENST00000439468 NTNG1Q9Y2I2 539 aa2.66□□□□□ -1.98
VPS41-207ENST00000439468 MAGI3Q5TCQ9 1506 aa2.66□□□□□ -1.98
VPS41-207ENST00000439468 ARAP3Q8WWN8 1544 aa2.66□□□□□ -1.98
VPS41-207ENST00000439468 EP400Q96L91 3159 aa2.66□□□□□ -1.98
VPS41-207ENST00000439468 C3P01024 1663 aa2.66□□□□□ -1.98
VPS41-207ENST00000439468 SUPT6HQ7KZ85 1726 aaKnown RBP2.65□□□□□ -1.98
VPS41-207ENST00000439468 STRCP1A6NGW2 1772 aa2.65□□□□□ -1.99
VPS41-207ENST00000439468 IGLV3-10A0A075B6K4 115 aa2.65□□□□□ -1.99
VPS41-207ENST00000439468 TRBV7-9A0A0J9YWB2 115 aa2.65□□□□□ -1.99
VPS41-207ENST00000439468 A8MX80 341 aa2.65□□□□□ -1.99
VPS41-207ENST00000439468 TM9SF1O15321 606 aa2.65□□□□□ -1.99
VPS41-207ENST00000439468 DUX1O43812 170 aa2.65□□□□□ -1.99
VPS41-207ENST00000439468 SNRPCP09234 159 aaKnown RBP2.65□□□□□ -1.99
VPS41-207ENST00000439468 TSPY4P0CV99 314 aa2.65□□□□□ -1.99
VPS41-207ENST00000439468 TSPY10P0CW01 314 aa2.65□□□□□ -1.99
VPS41-207ENST00000439468 ANXA3P12429 323 aa2.65□□□□□ -1.99
VPS41-207ENST00000439468 UQCRBP14927 111 aa2.65□□□□□ -1.99
VPS41-207ENST00000439468 DESP17661 470 aa2.65□□□□□ -1.99
VPS41-207ENST00000439468 SDC1P18827 310 aa2.65□□□□□ -1.99
VPS41-207ENST00000439468 PAX7P23759 505 aa2.65□□□□□ -1.99
VPS41-207ENST00000439468 AXLP30530 894 aa2.65□□□□□ -1.99
VPS41-207ENST00000439468 CDH5P33151 784 aaPredicted RBP2.65□□□□□ -1.99
VPS41-207ENST00000439468 MAGEA9P43362 315 aa2.65□□□□□ -1.99
VPS41-207ENST00000439468 ALDH3B2P48448 385 aa2.65□□□□□ -1.99
VPS41-207ENST00000439468 LIM2P55344 173 aa2.65□□□□□ -1.99
VPS41-207ENST00000439468 CXCL6P80162 114 aa2.65□□□□□ -1.99
VPS41-207ENST00000439468 CNTN2Q02246 1040 aa2.65□□□□□ -1.99
VPS41-207ENST00000439468 OVGP1Q12889 678 aa2.65□□□□□ -1.99
VPS41-207ENST00000439468 CAMK4Q16566 473 aa2.65□□□□□ -1.99
VPS41-207ENST00000439468 MAPK6Q16659 721 aa2.65□□□□□ -1.99
VPS41-207ENST00000439468 LINC01620Q4KN68 170 aa2.65□□□□□ -1.99
VPS41-207ENST00000439468 HSP90AA5PQ58FG0 334 aa2.65□□□□□ -1.99
VPS41-207ENST00000439468 FAM120AOSQ5T036 256 aa2.65□□□□□ -1.99
VPS41-207ENST00000439468 GALNT17Q6IS24 598 aa2.65□□□□□ -1.99
VPS41-207ENST00000439468 NIPAL3Q6P499 406 aa2.65□□□□□ -1.99
VPS41-207ENST00000439468 AFTPHQ6ULP2 937 aa2.65□□□□□ -1.99
VPS41-207ENST00000439468 CBLN3Q6UW01 205 aa2.65□□□□□ -1.99
VPS41-207ENST00000439468 GCNT7Q6ZNI0 430 aa2.65□□□□□ -1.99
VPS41-207ENST00000439468 ARMCX2Q7L311 632 aa2.65□□□□□ -1.99
VPS41-207ENST00000439468 VPS36Q86VN1 386 aa2.65□□□□□ -1.99
VPS41-207ENST00000439468 ZNF573Q86YE8 665 aa2.65□□□□□ -1.99
VPS41-207ENST00000439468 FBXL16Q8N461 479 aa2.65□□□□□ -1.99
VPS41-207ENST00000439468 LINC00612Q8N6U2 182 aa2.65□□□□□ -1.99
VPS41-207ENST00000439468 Q8N9G6 341 aaPredicted RBP2.65□□□□□ -1.99
VPS41-207ENST00000439468 STKLD1Q8NE28 680 aa2.65□□□□□ -1.99
VPS41-207ENST00000439468 KLHL30-AS1Q8NEE0 82 aa2.65□□□□□ -1.99
VPS41-207ENST00000439468 OR2T33Q8NG76 320 aa2.65□□□□□ -1.99
VPS41-207ENST00000439468 GTSF1Q8WW33 167 aa2.65□□□□□ -1.99
VPS41-207ENST00000439468 DTNBP1Q96EV8 351 aa2.65□□□□□ -1.99
VPS41-207ENST00000439468 PPP1R16AQ96I34 528 aa2.65□□□□□ -1.99
VPS41-207ENST00000439468 C9orf85Q96MD7 179 aa2.65□□□□□ -1.99
VPS41-207ENST00000439468 TSGA13Q96PP4 275 aa2.65□□□□□ -1.99
VPS41-207ENST00000439468 VPS35Q96QK1 796 aa2.65□□□□□ -1.99
VPS41-207ENST00000439468 PSMB7Q99436 277 aa2.65□□□□□ -1.99
VPS41-207ENST00000439468 HCAR1Q9BXC0 346 aa2.65□□□□□ -1.99
VPS41-207ENST00000439468 GSDMCQ9BYG8 508 aa2.65□□□□□ -1.99
VPS41-207ENST00000439468 POLR3FQ9H1D9 316 aaPredicted RBP2.65□□□□□ -1.99
VPS41-207ENST00000439468 SLC25A51Q9H1U9 297 aa2.65□□□□□ -1.99
VPS41-207ENST00000439468 DHX33Q9H6R0 707 aaKnown RBP2.65□□□□□ -1.99
VPS41-207ENST00000439468 LPAR2Q9HBW0 351 aa2.65□□□□□ -1.99
VPS41-207ENST00000439468 MIEF1Q9NQG6 463 aa2.65□□□□□ -1.99
VPS41-207ENST00000439468 IMPAD1Q9NX62 359 aa2.65□□□□□ -1.99
VPS41-207ENST00000439468 ELOVL2Q9NXB9 296 aa2.65□□□□□ -1.99
VPS41-207ENST00000439468 TMOD2Q9NZR1 351 aa2.65□□□□□ -1.99
VPS41-207ENST00000439468 Q9UF83 564 aa2.65□□□□□ -1.99
VPS41-207ENST00000439468 ZNF107Q9UII5 783 aaPredicted RBP2.65□□□□□ -1.99
VPS41-207ENST00000439468 B9D1Q9UPM9 204 aa2.65□□□□□ -1.99
VPS41-207ENST00000439468 CHMP2BQ9UQN3 213 aa2.65□□□□□ -1.99
VPS41-207ENST00000439468 AP4B1Q9Y6B7 739 aa2.65□□□□□ -1.99
VPS41-207ENST00000439468 AP1M2Q9Y6Q5 423 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms