RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 LSM1O15116 133 aaKnown RBP16.65■□□□□ 0.26
AC004540.1-201ENST00000439120 NPHS1O60500 1241 aa16.65■□□□□ 0.26
AC004540.1-201ENST00000439120 TBX19O60806 448 aa16.65■□□□□ 0.26
AC004540.1-201ENST00000439120 TNFSF13O75888 250 aa16.65■□□□□ 0.26
AC004540.1-201ENST00000439120 HPGDP15428 266 aa16.65■□□□□ 0.26
AC004540.1-201ENST00000439120 MAPK1P28482 360 aa16.65■□□□□ 0.26
AC004540.1-201ENST00000439120 ALDH3A1P30838 453 aa16.65■□□□□ 0.26
AC004540.1-201ENST00000439120 HPCAL1P37235 193 aa16.65■□□□□ 0.26
AC004540.1-201ENST00000439120 SIRPAP78324 504 aa16.65■□□□□ 0.26
AC004540.1-201ENST00000439120 PRR5P85299 388 aa16.65■□□□□ 0.26
AC004540.1-201ENST00000439120 POU4F3Q15319 338 aa16.65■□□□□ 0.26
AC004540.1-201ENST00000439120 SGCBQ16585 318 aa16.65■□□□□ 0.26
AC004540.1-201ENST00000439120 GRAMD1BQ3KR37 738 aa16.65■□□□□ 0.26
AC004540.1-201ENST00000439120 GLYR1Q49A26 553 aaPredicted RBP16.65■□□□□ 0.26
AC004540.1-201ENST00000439120 ZNF385BQ569K4 471 aa16.65■□□□□ 0.26
AC004540.1-201ENST00000439120 PPP4R4Q6NUP7 873 aa16.65■□□□□ 0.26
AC004540.1-201ENST00000439120 EXOC3L1Q86VI1 746 aa16.65■□□□□ 0.26
AC004540.1-201ENST00000439120 OR2W6PQ8NHA6 318 aa16.65■□□□□ 0.26
AC004540.1-201ENST00000439120 JADE3Q92613 823 aa16.65■□□□□ 0.26
AC004540.1-201ENST00000439120 MTERF3Q96E29 417 aa16.65■□□□□ 0.26
AC004540.1-201ENST00000439120 CHMP6Q96FZ7 201 aa16.65■□□□□ 0.26
AC004540.1-201ENST00000439120 PGM2Q96G03 612 aa16.65■□□□□ 0.26
AC004540.1-201ENST00000439120 FCRL1Q96LA6 429 aa16.65■□□□□ 0.26
AC004540.1-201ENST00000439120 ALPK1Q96QP1 1244 aa16.65■□□□□ 0.26
AC004540.1-201ENST00000439120 RTN4RQ9BZR6 473 aa16.65■□□□□ 0.26
AC004540.1-201ENST00000439120 TUBB1Q9H4B7 451 aa16.65■□□□□ 0.26
AC004540.1-201ENST00000439120 L2HGDHQ9H9P8 463 aa16.65■□□□□ 0.26
AC004540.1-201ENST00000439120 ACSS1Q9NUB1 689 aaPredicted RBP16.65■□□□□ 0.26
AC004540.1-201ENST00000439120 EIF3LQ9Y262 564 aaKnown RBP16.65■□□□□ 0.26
AC004540.1-201ENST00000439120 TRAF6Q9Y4K3 522 aa16.65■□□□□ 0.26
AC004540.1-201ENST00000439120 TMEM233B4DJY2 109 aa16.64■□□□□ 0.25
AC004540.1-201ENST00000439120 EMC8O43402 210 aa16.64■□□□□ 0.25
AC004540.1-201ENST00000439120 NDUFB5O43674 189 aa16.64■□□□□ 0.25
AC004540.1-201ENST00000439120 TNFRSF21O75509 655 aa16.64■□□□□ 0.25
AC004540.1-201ENST00000439120 NKX2-2O95096 273 aa16.64■□□□□ 0.25
AC004540.1-201ENST00000439120 IGKV1D-16P01601 117 aa16.64■□□□□ 0.25
AC004540.1-201ENST00000439120 CHRNGP07510 517 aa16.64■□□□□ 0.25
AC004540.1-201ENST00000439120 ALOX5P09917 674 aa16.64■□□□□ 0.25
AC004540.1-201ENST00000439120 RPL3P39023 403 aaKnown RBP16.64■□□□□ 0.25
AC004540.1-201ENST00000439120 PDE7AQ13946 482 aa16.64■□□□□ 0.25
AC004540.1-201ENST00000439120 ARL13AQ5H913 290 aaPredicted RBP16.64■□□□□ 0.25
AC004540.1-201ENST00000439120 GALNT10Q86SR1 603 aa16.64■□□□□ 0.25
AC004540.1-201ENST00000439120 TGIF2LYQ8IUE0 185 aa16.64■□□□□ 0.25
AC004540.1-201ENST00000439120 BANPQ8N9N5 519 aa16.64■□□□□ 0.25
AC004540.1-201ENST00000439120 AGR3Q8TD06 166 aa16.64■□□□□ 0.25
AC004540.1-201ENST00000439120 FIG4Q92562 907 aa16.64■□□□□ 0.25
AC004540.1-201ENST00000439120 ZNF845Q96IR2 970 aaPredicted RBP16.64■□□□□ 0.25
AC004540.1-201ENST00000439120 PPP3R2Q96LZ3 170 aa16.64■□□□□ 0.25
AC004540.1-201ENST00000439120 MECRQ9BV79 373 aa16.64■□□□□ 0.25
AC004540.1-201ENST00000439120 VDAC3Q9Y277 283 aa16.64■□□□□ 0.25
AC004540.1-201ENST00000439120 ZNF175Q9Y473 711 aa16.64■□□□□ 0.25
AC004540.1-201ENST00000439120 AP4B1Q9Y6B7 739 aa16.64■□□□□ 0.25
AC004540.1-201ENST00000439120 IGLV3-32A0A0A0MS00 114 aa16.63■□□□□ 0.25
AC004540.1-201ENST00000439120 H0YC42 278 aa16.63■□□□□ 0.25
AC004540.1-201ENST00000439120 PIP5K1BO14986 540 aa16.63■□□□□ 0.25
AC004540.1-201ENST00000439120 SPAG7O75391 227 aa16.63■□□□□ 0.25
AC004540.1-201ENST00000439120 FGF4P08620 206 aa16.63■□□□□ 0.25
AC004540.1-201ENST00000439120 FCGR2AP12318 317 aa16.63■□□□□ 0.25
AC004540.1-201ENST00000439120 BCKDHAP12694 445 aa16.63■□□□□ 0.25
AC004540.1-201ENST00000439120 KCNJ5P48544 419 aa16.63■□□□□ 0.25
AC004540.1-201ENST00000439120 SERPINB4P48594 390 aa16.63■□□□□ 0.25
AC004540.1-201ENST00000439120 SUCLG1P53597 346 aaKnown RBP16.63■□□□□ 0.25
AC004540.1-201ENST00000439120 TPD52P55327 224 aaPredicted RBP16.63■□□□□ 0.25
AC004540.1-201ENST00000439120 CLDN20P56880 219 aa16.63■□□□□ 0.25
AC004540.1-201ENST00000439120 FGFBP1Q14512 234 aa16.63■□□□□ 0.25
AC004540.1-201ENST00000439120 PON3Q15166 354 aa16.63■□□□□ 0.25
AC004540.1-201ENST00000439120 VWA1Q6PCB0 445 aa16.63■□□□□ 0.25
AC004540.1-201ENST00000439120 FIGNL1Q6PIW4 674 aa16.63■□□□□ 0.25
AC004540.1-201ENST00000439120 LRIG3Q6UXM1 1119 aa16.63■□□□□ 0.25
AC004540.1-201ENST00000439120 TRABD2AQ86V40 505 aa16.63■□□□□ 0.25
AC004540.1-201ENST00000439120 COX18Q8N8Q8 333 aa16.63■□□□□ 0.25
AC004540.1-201ENST00000439120 OR6Y1Q8NGX8 325 aa16.63■□□□□ 0.25
AC004540.1-201ENST00000439120 STARD4Q96DR4 205 aa16.63■□□□□ 0.25
AC004540.1-201ENST00000439120 SLC39A3Q9BRY0 314 aa16.63■□□□□ 0.25
AC004540.1-201ENST00000439120 PRRG4Q9BZD6 226 aa16.63■□□□□ 0.25
AC004540.1-201ENST00000439120 SLC17A7Q9P2U7 560 aa16.63■□□□□ 0.25
AC004540.1-201ENST00000439120 HRNRQ86YZ3 2850 aaPredicted RBP16.62■□□□□ 0.25
AC004540.1-201ENST00000439120 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.62■□□□□ 0.25
AC004540.1-201ENST00000439120 ALG1L2C9J202 215 aa16.62■□□□□ 0.25
AC004540.1-201ENST00000439120 SCDO00767 359 aa16.62■□□□□ 0.25
AC004540.1-201ENST00000439120 OXSR1O95747 527 aaPredicted RBP16.62■□□□□ 0.25
AC004540.1-201ENST00000439120 HRGP04196 525 aa16.62■□□□□ 0.25
AC004540.1-201ENST00000439120 NUDT17P0C025 328 aa16.62■□□□□ 0.25
AC004540.1-201ENST00000439120 ACP2P11117 423 aa16.62■□□□□ 0.25
AC004540.1-201ENST00000439120 KLK2P20151 261 aa16.62■□□□□ 0.25
AC004540.1-201ENST00000439120 EFNA1P20827 205 aaPredicted RBP16.62■□□□□ 0.25
AC004540.1-201ENST00000439120 FRKP42685 505 aaPredicted RBP16.62■□□□□ 0.25
AC004540.1-201ENST00000439120 PRIM2P49643 509 aa16.62■□□□□ 0.25
AC004540.1-201ENST00000439120 ZNF41P51814 821 aaPredicted RBP16.62■□□□□ 0.25
AC004540.1-201ENST00000439120 CLDN15P56746 228 aa16.62■□□□□ 0.25
AC004540.1-201ENST00000439120 ATP6AP1LQ52LC2 224 aa16.62■□□□□ 0.25
AC004540.1-201ENST00000439120 MFSD12Q6NUT3 480 aa16.62■□□□□ 0.25
AC004540.1-201ENST00000439120 ZCCHC12Q6PEW1 402 aa16.62■□□□□ 0.25
AC004540.1-201ENST00000439120 APOOLQ6UXV4 268 aa16.62■□□□□ 0.25
AC004540.1-201ENST00000439120 GATSQ8NAP1 163 aa16.62■□□□□ 0.25
AC004540.1-201ENST00000439120 SLC16A11Q8NCK7 471 aa16.62■□□□□ 0.25
AC004540.1-201ENST00000439120 FNDC9Q8TBE3 224 aa16.62■□□□□ 0.25
AC004540.1-201ENST00000439120 HOXB13Q92826 284 aaPredicted RBP16.62■□□□□ 0.25
AC004540.1-201ENST00000439120 MBD6Q96DN6 1003 aa16.62■□□□□ 0.25
AC004540.1-201ENST00000439120 GIMAP5Q96F15 307 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms