RNA–Protein interactions for RNA: ENST00000439080.6

TARDBP-203, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-203ENST00000439080 RAD21L1Q9H4I0 556 aa15.45■□□□□ 0.06
TARDBP-203ENST00000439080 ZDHHC11Q9H8X9 412 aa15.45■□□□□ 0.06
TARDBP-203ENST00000439080 UBQLN4Q9NRR5 601 aa15.45■□□□□ 0.06
TARDBP-203ENST00000439080 C15orf41Q9Y2V0 281 aa15.45■□□□□ 0.06
TARDBP-203ENST00000439080 ZNF407Q9C0G0 2248 aa15.44■□□□□ 0.06
TARDBP-203ENST00000439080 PRAMEF27A3QJZ7 478 aa15.44■□□□□ 0.06
TARDBP-203ENST00000439080 SCDO00767 359 aa15.44■□□□□ 0.06
TARDBP-203ENST00000439080 STX11O75558 287 aa15.44■□□□□ 0.06
TARDBP-203ENST00000439080 WISP2O76076 250 aa15.44■□□□□ 0.06
TARDBP-203ENST00000439080 ZIC2O95409 532 aaPredicted RBP15.44■□□□□ 0.06
TARDBP-203ENST00000439080 TBXA2RP21731 343 aa15.44■□□□□ 0.06
TARDBP-203ENST00000439080 GDF1P27539 372 aa15.44■□□□□ 0.06
TARDBP-203ENST00000439080 CLK3P49761 638 aaKnown RBP15.44■□□□□ 0.06
TARDBP-203ENST00000439080 DSTNP60981 165 aa15.44■□□□□ 0.06
TARDBP-203ENST00000439080 FADDQ13158 208 aa15.44■□□□□ 0.06
TARDBP-203ENST00000439080 TRMT5Q32P41 509 aaKnown RBP15.44■□□□□ 0.06
TARDBP-203ENST00000439080 MMEL1Q495T6 779 aa15.44■□□□□ 0.06
TARDBP-203ENST00000439080 GPAT3Q53EU6 434 aa15.44■□□□□ 0.06
TARDBP-203ENST00000439080 CMPK2Q5EBM0 449 aa15.44■□□□□ 0.06
TARDBP-203ENST00000439080 COQ5Q5HYK3 327 aa15.44■□□□□ 0.06
TARDBP-203ENST00000439080 TIGD3Q6B0B8 471 aa15.44■□□□□ 0.06
TARDBP-203ENST00000439080 APOOLQ6UXV4 268 aa15.44■□□□□ 0.06
TARDBP-203ENST00000439080 BNC2Q6ZN30 1099 aaPredicted RBP15.44■□□□□ 0.06
TARDBP-203ENST00000439080 GALNT11Q8NCW6 608 aa15.44■□□□□ 0.06
TARDBP-203ENST00000439080 OR1J4Q8NGS1 313 aa15.44■□□□□ 0.06
TARDBP-203ENST00000439080 OR4C3Q8NH37 302 aa15.44■□□□□ 0.06
TARDBP-203ENST00000439080 GNRHR2Q96P88 292 aa15.44■□□□□ 0.06
TARDBP-203ENST00000439080 CCT8L2Q96SF2 557 aa15.44■□□□□ 0.06
TARDBP-203ENST00000439080 CPPED1Q9BRF8 314 aaPredicted RBP15.44■□□□□ 0.06
TARDBP-203ENST00000439080 RTN4RQ9BZR6 473 aa15.44■□□□□ 0.06
TARDBP-203ENST00000439080 MYLK2Q9H1R3 596 aa15.44■□□□□ 0.06
TARDBP-203ENST00000439080 IKZF5Q9H5V7 419 aa15.44■□□□□ 0.06
TARDBP-203ENST00000439080 PPP4R1LQ9P1A2 415 aa15.44■□□□□ 0.06
TARDBP-203ENST00000439080 P2RX2Q9UBL9 471 aa15.44■□□□□ 0.06
TARDBP-203ENST00000439080 SEC14L3Q9UDX4 400 aa15.44■□□□□ 0.06
TARDBP-203ENST00000439080 ARL2BPQ9Y2Y0 163 aa15.44■□□□□ 0.06
TARDBP-203ENST00000439080 TENM4Q6N022 2769 aa15.43■□□□□ 0.06
TARDBP-203ENST00000439080 ALG1L2C9J202 215 aa15.43■□□□□ 0.06
TARDBP-203ENST00000439080 MRASO14807 208 aa15.43■□□□□ 0.06
TARDBP-203ENST00000439080 KIAA0513O60268 411 aa15.43■□□□□ 0.06
TARDBP-203ENST00000439080 CDC40O60508 579 aaKnown RBP eCLIP15.43■□□□□ 0.065e-6■■□□□ 12.3
TARDBP-203ENST00000439080 ANGPTL1O95841 491 aa15.43■□□□□ 0.06
TARDBP-203ENST00000439080 FAM107AO95990 144 aa15.43■□□□□ 0.06
TARDBP-203ENST00000439080 CELA3AP09093 270 aa15.43■□□□□ 0.06
TARDBP-203ENST00000439080 HPGDP15428 266 aa15.43■□□□□ 0.06
TARDBP-203ENST00000439080 PPIBP23284 216 aaKnown RBP15.43■□□□□ 0.06
TARDBP-203ENST00000439080 UQCRFS1P47985 274 aa15.43■□□□□ 0.06
TARDBP-203ENST00000439080 MRPL49Q13405 166 aaKnown RBP15.43■□□□□ 0.06
TARDBP-203ENST00000439080 RGNQ15493 299 aa15.43■□□□□ 0.06
TARDBP-203ENST00000439080 SYPL1Q16563 259 aa15.43■□□□□ 0.06
TARDBP-203ENST00000439080 TYW3Q6IPR3 259 aaKnown RBP15.43■□□□□ 0.06
TARDBP-203ENST00000439080 MARCH3Q86UD3 253 aa15.43■□□□□ 0.06
TARDBP-203ENST00000439080 TREML1Q86YW5 311 aa15.43■□□□□ 0.06
TARDBP-203ENST00000439080 POU5F2Q8N7G0 328 aa15.43■□□□□ 0.06
TARDBP-203ENST00000439080 WDSUB1Q8N9V3 476 aa15.43■□□□□ 0.06
TARDBP-203ENST00000439080 GATSQ8NAP1 163 aa15.43■□□□□ 0.06
TARDBP-203ENST00000439080 ZNF527Q8NB42 609 aa15.43■□□□□ 0.06
TARDBP-203ENST00000439080 UBQLN3Q9H347 655 aa15.43■□□□□ 0.06
TARDBP-203ENST00000439080 MKLN1Q9UL63 735 aa15.43■□□□□ 0.06
TARDBP-203ENST00000439080 WDR45Q9Y484 360 aa15.43■□□□□ 0.06
TARDBP-203ENST00000439080 LIPGQ9Y5X9 500 aa15.43■□□□□ 0.06
TARDBP-203ENST00000439080 GMEB1Q9Y692 573 aa15.43■□□□□ 0.06
TARDBP-203ENST00000439080 PCNX3Q9H6A9 2034 aa15.43■□□□□ 0.06
TARDBP-203ENST00000439080 GCN1Q92616 2671 aaKnown RBP15.42■□□□□ 0.06
TARDBP-203ENST00000439080 LOC100653049A0A140TA62 436 aa15.42■□□□□ 0.06
TARDBP-203ENST00000439080 ANKUB1A6NFN9 424 aa15.42■□□□□ 0.06
TARDBP-203ENST00000439080 B4DXG7 233 aa15.42■□□□□ 0.06
TARDBP-203ENST00000439080 NPIPB9F8W1W9 429 aa15.42■□□□□ 0.06
TARDBP-203ENST00000439080 FCMRO60667 390 aa15.42■□□□□ 0.06
TARDBP-203ENST00000439080 KRT34O76011 436 aa15.42■□□□□ 0.06
TARDBP-203ENST00000439080 H6PDO95479 791 aa15.42■□□□□ 0.06
TARDBP-203ENST00000439080 CBX6O95503 412 aa15.42■□□□□ 0.06
TARDBP-203ENST00000439080 CHRM4P08173 479 aa15.42■□□□□ 0.06
TARDBP-203ENST00000439080 RNF144AP50876 292 aaPredicted RBP15.42■□□□□ 0.06
TARDBP-203ENST00000439080 HSF1Q00613 529 aa15.42■□□□□ 0.06
TARDBP-203ENST00000439080 CYLC2Q14093 348 aaPredicted RBP15.42■□□□□ 0.06
TARDBP-203ENST00000439080 CAPRIN1Q14444 709 aaKnown RBP15.42■□□□□ 0.06
TARDBP-203ENST00000439080 GPR68Q15743 365 aa15.42■□□□□ 0.06
TARDBP-203ENST00000439080 OR5M10Q6IEU7 315 aa15.42■□□□□ 0.06
TARDBP-203ENST00000439080 GFRALQ6UXV0 394 aa15.42■□□□□ 0.06
TARDBP-203ENST00000439080 FRRS1Q6ZNA5 592 aa15.42■□□□□ 0.06
TARDBP-203ENST00000439080 PLCZ1Q86YW0 608 aa15.42■□□□□ 0.06
TARDBP-203ENST00000439080 C10orf111Q8N326 155 aa15.42■□□□□ 0.06
TARDBP-203ENST00000439080 ZNF614Q8N883 585 aa15.42■□□□□ 0.06
TARDBP-203ENST00000439080 ANKFN1Q8N957 763 aa15.42■□□□□ 0.06
TARDBP-203ENST00000439080 ANKRD27Q96NW4 1050 aa15.42■□□□□ 0.06
TARDBP-203ENST00000439080 TRNT1Q96Q11 434 aaKnown RBP15.42■□□□□ 0.06
TARDBP-203ENST00000439080 CGREF1Q99674 301 aa15.42■□□□□ 0.06
TARDBP-203ENST00000439080 TRIM8Q9BZR9 551 aa15.42■□□□□ 0.06
TARDBP-203ENST00000439080 HOXD1Q9GZZ0 328 aa15.42■□□□□ 0.06
TARDBP-203ENST00000439080 DEFB127Q9H1M4 99 aa15.42■□□□□ 0.06
TARDBP-203ENST00000439080 POLE3Q9NRF9 147 aa15.42■□□□□ 0.06
TARDBP-203ENST00000439080 FBXL2Q9UKC9 423 aa15.42■□□□□ 0.06
TARDBP-203ENST00000439080 CORO2BQ9UQ03 480 aa15.42■□□□□ 0.06
TARDBP-203ENST00000439080 LIPT1Q9Y234 373 aa15.42■□□□□ 0.06
TARDBP-203ENST00000439080 RP1L1Q8IWN7 2480 aaPredicted RBP15.41■□□□□ 0.06
TARDBP-203ENST00000439080 DNAJC13O75165 2243 aa15.41■□□□□ 0.06
TARDBP-203ENST00000439080 MYO18BQ8IUG5 2567 aa15.41■□□□□ 0.06
TARDBP-203ENST00000439080 CENPVL1A0A0U1RR11 272 aa15.41■□□□□ 0.06
TARDBP-203ENST00000439080 A0A1W2PQD3 144 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms