RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 STX16-NPEPL1H3BU86 382 aa9.96□□□□□ -0.82
CSTF3-203ENST00000438862 LINC01387J3KSC0 135 aa9.96□□□□□ -0.82
CSTF3-203ENST00000438862 RTCAO00442 366 aaKnown RBP9.96□□□□□ -0.82
CSTF3-203ENST00000438862 STX16O14662 325 aa9.96□□□□□ -0.82
CSTF3-203ENST00000438862 CLGNO14967 610 aa9.96□□□□□ -0.82
CSTF3-203ENST00000438862 KIAA0513O60268 411 aa9.96□□□□□ -0.82
CSTF3-203ENST00000438862 ZIC3O60481 467 aa9.96□□□□□ -0.82
CSTF3-203ENST00000438862 SMIM24O75264 130 aa9.96□□□□□ -0.82
CSTF3-203ENST00000438862 FCGR2AP12318 317 aa9.96□□□□□ -0.82
CSTF3-203ENST00000438862 MTHFD2P13995 350 aa9.96□□□□□ -0.82
CSTF3-203ENST00000438862 CPA3P15088 417 aa9.96□□□□□ -0.82
CSTF3-203ENST00000438862 ITGA2P17301 1181 aa9.96□□□□□ -0.82
CSTF3-203ENST00000438862 ATP5F1P24539 256 aaPredicted RBP9.96□□□□□ -0.82
CSTF3-203ENST00000438862 BUD31P41223 144 aaPredicted RBP9.96□□□□□ -0.82
CSTF3-203ENST00000438862 GDF5P43026 501 aa9.96□□□□□ -0.82
CSTF3-203ENST00000438862 SSR2P43308 183 aa9.96□□□□□ -0.82
CSTF3-203ENST00000438862 NEK2P51955 445 aa9.96□□□□□ -0.82
CSTF3-203ENST00000438862 ALDH18A1P54886 795 aaKnown RBP9.96□□□□□ -0.82
CSTF3-203ENST00000438862 DNAJB13P59910 316 aa9.96□□□□□ -0.82
CSTF3-203ENST00000438862 TNFRSF17Q02223 184 aa9.96□□□□□ -0.82
CSTF3-203ENST00000438862 LAPTM5Q13571 262 aa9.96□□□□□ -0.82
CSTF3-203ENST00000438862 OR4D1Q15615 310 aa9.96□□□□□ -0.82
CSTF3-203ENST00000438862 HIST2H2ACQ16777 129 aaPredicted RBP9.96□□□□□ -0.82
CSTF3-203ENST00000438862 AGAP6Q5VW22 663 aa9.96□□□□□ -0.82
CSTF3-203ENST00000438862 HIST2H2AA3Q6FI13 130 aa9.96□□□□□ -0.82
CSTF3-203ENST00000438862 OR4C11Q6IEV9 310 aa9.96□□□□□ -0.82
CSTF3-203ENST00000438862 ADNP2Q6IQ32 1131 aa9.96□□□□□ -0.82
CSTF3-203ENST00000438862 ZYG11AQ6WRX3 759 aa9.96□□□□□ -0.82
CSTF3-203ENST00000438862 STK32CQ86UX6 486 aa9.96□□□□□ -0.82
CSTF3-203ENST00000438862 SPATA6LQ8N4H0 392 aa9.96□□□□□ -0.82
CSTF3-203ENST00000438862 ZNF615Q8N8J6 731 aa9.96□□□□□ -0.82
CSTF3-203ENST00000438862 GBP7Q8N8V2 638 aaPredicted RBP9.96□□□□□ -0.82
CSTF3-203ENST00000438862 OR7G1Q8NGA0 311 aa9.96□□□□□ -0.82
CSTF3-203ENST00000438862 FNDC9Q8TBE3 224 aa9.96□□□□□ -0.82
CSTF3-203ENST00000438862 NEUROG1Q92886 237 aa9.96□□□□□ -0.82
CSTF3-203ENST00000438862 PTCD3Q96EY7 689 aaKnown RBP9.96□□□□□ -0.82
CSTF3-203ENST00000438862 C1orf159Q96HA4 380 aa9.96□□□□□ -0.82
CSTF3-203ENST00000438862 EFCAB11Q9BUY7 163 aa9.96□□□□□ -0.82
CSTF3-203ENST00000438862 C1QTNF3Q9BXJ4 246 aa9.96□□□□□ -0.82
CSTF3-203ENST00000438862 MS4A8Q9BY19 250 aa9.96□□□□□ -0.82
CSTF3-203ENST00000438862 TRIM2Q9C040 744 aa9.96□□□□□ -0.82
CSTF3-203ENST00000438862 CXorf21Q9HAI6 301 aa9.96□□□□□ -0.82
CSTF3-203ENST00000438862 FAM53CQ9NYF3 392 aa9.96□□□□□ -0.82
CSTF3-203ENST00000438862 CISD1Q9NZ45 108 aaKnown RBP9.96□□□□□ -0.82
CSTF3-203ENST00000438862 DKKL1Q9UK85 242 aa9.96□□□□□ -0.82
CSTF3-203ENST00000438862 EMCNQ9ULC0 261 aa9.96□□□□□ -0.82
CSTF3-203ENST00000438862 A0A0A6YYJ9 748 aa9.95□□□□□ -0.82
CSTF3-203ENST00000438862 NPEPPSL1A6NEC2 478 aa9.95□□□□□ -0.82
CSTF3-203ENST00000438862 PRAMEF25A6NGN4 478 aa9.95□□□□□ -0.82
CSTF3-203ENST00000438862 SLCO1B7G3V0H7 640 aa9.95□□□□□ -0.82
CSTF3-203ENST00000438862 G3V2L1 256 aa9.95□□□□□ -0.82
CSTF3-203ENST00000438862 H3BQF6 201 aa9.95□□□□□ -0.82
CSTF3-203ENST00000438862 SPAG7O75391 227 aa9.95□□□□□ -0.82
CSTF3-203ENST00000438862 SNUPNO95149 360 aaKnown RBP9.95□□□□□ -0.82
CSTF3-203ENST00000438862 S100BP04271 92 aaPredicted RBP9.95□□□□□ -0.82
CSTF3-203ENST00000438862 CSF3P09919 207 aa9.95□□□□□ -0.82
CSTF3-203ENST00000438862 SBK3P0C264 359 aa9.95□□□□□ -0.82
CSTF3-203ENST00000438862 MYL2P10916 166 aa9.95□□□□□ -0.82
CSTF3-203ENST00000438862 CLDN15P56746 228 aa9.95□□□□□ -0.82
CSTF3-203ENST00000438862 RPS3AP61247 264 aaKnown RBP9.95□□□□□ -0.82
CSTF3-203ENST00000438862 HMGCS1Q01581 520 aa9.95□□□□□ -0.82
CSTF3-203ENST00000438862 MPP2Q14168 576 aa9.95□□□□□ -0.82
CSTF3-203ENST00000438862 PON3Q15166 354 aa9.95□□□□□ -0.82
CSTF3-203ENST00000438862 RAB35Q15286 201 aa9.95□□□□□ -0.82
CSTF3-203ENST00000438862 PAGE2BQ5JRK9 111 aa9.95□□□□□ -0.82
CSTF3-203ENST00000438862 C18orf63Q68DL7 685 aa9.95□□□□□ -0.82
CSTF3-203ENST00000438862 ALKBH2Q6NS38 261 aa9.95□□□□□ -0.82
CSTF3-203ENST00000438862 C10orf105Q8TEF2 133 aa9.95□□□□□ -0.82
CSTF3-203ENST00000438862 HSD17B8Q92506 261 aa9.95□□□□□ -0.82
CSTF3-203ENST00000438862 GFM2Q969S9 779 aaKnown RBP9.95□□□□□ -0.82
CSTF3-203ENST00000438862 TMCO6Q96DC7 493 aa9.95□□□□□ -0.82
CSTF3-203ENST00000438862 WDR34Q96EX3 536 aa9.95□□□□□ -0.82
CSTF3-203ENST00000438862 GMPPAQ96IJ6 420 aaPredicted RBP9.95□□□□□ -0.82
CSTF3-203ENST00000438862 NXF5Q9H1B4 397 aaKnown RBP9.95□□□□□ -0.82
CSTF3-203ENST00000438862 MANSC1Q9H8J5 431 aa9.95□□□□□ -0.82
CSTF3-203ENST00000438862 EML4Q9HC35 981 aaKnown RBP9.95□□□□□ -0.82
CSTF3-203ENST00000438862 OXSMQ9NWU1 459 aa9.95□□□□□ -0.82
CSTF3-203ENST00000438862 FBXL2Q9UKC9 423 aa9.95□□□□□ -0.82
CSTF3-203ENST00000438862 IKZF3Q9UKT9 509 aa9.95□□□□□ -0.82
CSTF3-203ENST00000438862 CFL2Q9Y281 166 aa9.95□□□□□ -0.82
CSTF3-203ENST00000438862 ACOX3O15254 700 aa9.94□□□□□ -0.82
CSTF3-203ENST00000438862 TRIM13O60858 407 aa9.94□□□□□ -0.82
CSTF3-203ENST00000438862 PLGP00747 810 aaPredicted RBP9.94□□□□□ -0.82
CSTF3-203ENST00000438862 BPGMP07738 259 aa9.94□□□□□ -0.82
CSTF3-203ENST00000438862 GFAPP14136 432 aa9.94□□□□□ -0.82
CSTF3-203ENST00000438862 IMPDH1P20839 514 aa9.94□□□□□ -0.82
CSTF3-203ENST00000438862 GPX3P22352 226 aa9.94□□□□□ -0.82
CSTF3-203ENST00000438862 ADH6P28332 368 aa9.94□□□□□ -0.82
CSTF3-203ENST00000438862 SERPINB5P36952 375 aa9.94□□□□□ -0.82
CSTF3-203ENST00000438862 CASP2P42575 452 aa9.94□□□□□ -0.82
CSTF3-203ENST00000438862 PIK3CGP48736 1102 aa9.94□□□□□ -0.82
CSTF3-203ENST00000438862 SUCLG1P53597 346 aaKnown RBP9.94□□□□□ -0.82
CSTF3-203ENST00000438862 CTBP2P56545 445 aa9.94□□□□□ -0.82
CSTF3-203ENST00000438862 DSCR4P56555 118 aaPredicted RBP9.94□□□□□ -0.82
CSTF3-203ENST00000438862 B3GALT5-AS1P59052 145 aa9.94□□□□□ -0.82
CSTF3-203ENST00000438862 IRX1P78414 480 aaPredicted RBP9.94□□□□□ -0.82
CSTF3-203ENST00000438862 DEFA6Q01524 100 aa9.94□□□□□ -0.82
CSTF3-203ENST00000438862 DOC2AQ14183 400 aa9.94□□□□□ -0.82
CSTF3-203ENST00000438862 CTU2Q2VPK5 515 aaKnown RBP9.94□□□□□ -0.82
CSTF3-203ENST00000438862 HHATQ5VTY9 493 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms