RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 CUTCQ9NTM9 273 aa4.79□□□□□ -1.64
USP54-206ENST00000433394 FAM120CQ9NX05 1096 aaKnown RBP4.79□□□□□ -1.64
USP54-206ENST00000433394 COX16Q9P0S2 106 aa4.79□□□□□ -1.64
USP54-206ENST00000433394 RCOR3Q9P2K3 495 aaPredicted RBP4.79□□□□□ -1.64
USP54-206ENST00000433394 EXTL2Q9UBQ6 330 aa4.79□□□□□ -1.64
USP54-206ENST00000433394 TNIKQ9UKE5 1360 aa4.78□□□□□ -1.64
USP54-206ENST00000433394 GAPVD1Q14C86 1478 aa4.78□□□□□ -1.64
USP54-206ENST00000433394 MBLAC1A4D2B0 266 aaPredicted RBP4.78□□□□□ -1.64
USP54-206ENST00000433394 ACOD1A6NK06 481 aa4.78□□□□□ -1.64
USP54-206ENST00000433394 PCP4L1A6NKN8 68 aa4.78□□□□□ -1.64
USP54-206ENST00000433394 FAM74A7A6NL05 159 aa4.78□□□□□ -1.64
USP54-206ENST00000433394 EFCAB7A8K855 629 aa4.78□□□□□ -1.64
USP54-206ENST00000433394 HPP00738 406 aa4.78□□□□□ -1.64
USP54-206ENST00000433394 HBQ1P09105 142 aa4.78□□□□□ -1.64
USP54-206ENST00000433394 ZNF883P0CG24 379 aa4.78□□□□□ -1.64
USP54-206ENST00000433394 GLRA2P23416 452 aa4.78□□□□□ -1.64
USP54-206ENST00000433394 ACVR1BP36896 505 aa4.78□□□□□ -1.64
USP54-206ENST00000433394 ELK3P41970 407 aa4.78□□□□□ -1.64
USP54-206ENST00000433394 ARHGDIBP52566 201 aa4.78□□□□□ -1.64
USP54-206ENST00000433394 ZNF33BQ06732 778 aa4.78□□□□□ -1.64
USP54-206ENST00000433394 PUDPQ08623 228 aa4.78□□□□□ -1.64
USP54-206ENST00000433394 PJVKQ0ZLH3 352 aa4.78□□□□□ -1.64
USP54-206ENST00000433394 CYLC2Q14093 348 aaPredicted RBP4.78□□□□□ -1.64
USP54-206ENST00000433394 LINC01620Q4KN68 170 aa4.78□□□□□ -1.64
USP54-206ENST00000433394 FAM74A3Q4VXF1 159 aa4.78□□□□□ -1.64
USP54-206ENST00000433394 NHLRC3Q5JS37 347 aa4.78□□□□□ -1.64
USP54-206ENST00000433394 GSG1LQ6UXU4 331 aa4.78□□□□□ -1.64
USP54-206ENST00000433394 LANCL3Q6ZV70 420 aa4.78□□□□□ -1.64
USP54-206ENST00000433394 GPRIN3Q6ZVF9 776 aa4.78□□□□□ -1.64
USP54-206ENST00000433394 BHLHA9Q7RTU4 235 aa4.78□□□□□ -1.64
USP54-206ENST00000433394 VASH2Q86V25 355 aa4.78□□□□□ -1.64
USP54-206ENST00000433394 GRAMD2AQ8IUY3 354 aa4.78□□□□□ -1.64
USP54-206ENST00000433394 OR2T34Q8NGX1 318 aa4.78□□□□□ -1.64
USP54-206ENST00000433394 C11orf24Q96F05 449 aaPredicted RBP4.78□□□□□ -1.64
USP54-206ENST00000433394 CCT7Q99832 543 aa4.78□□□□□ -1.64
USP54-206ENST00000433394 OMDQ99983 421 aa4.78□□□□□ -1.64
USP54-206ENST00000433394 ZBP1Q9H171 429 aa4.78□□□□□ -1.64
USP54-206ENST00000433394 POLR3FQ9H1D9 316 aaPredicted RBP4.78□□□□□ -1.64
USP54-206ENST00000433394 GPN2Q9H9Y4 310 aaPredicted RBP4.78□□□□□ -1.64
USP54-206ENST00000433394 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.78□□□□□ -1.64
USP54-206ENST00000433394 CLSPNQ9HAW4 1339 aa4.77□□□□□ -1.65
USP54-206ENST00000433394 GRIN2BQ13224 1484 aa4.77□□□□□ -1.65
USP54-206ENST00000433394 MAGI1Q96QZ7 1491 aaPredicted RBP4.77□□□□□ -1.65
USP54-206ENST00000433394 RAPGEF2Q9Y4G8 1499 aa4.77□□□□□ -1.65
USP54-206ENST00000433394 SHISA9B4DS77 424 aa4.77□□□□□ -1.65
USP54-206ENST00000433394 CTAGE5O15320 804 aa4.77□□□□□ -1.65
USP54-206ENST00000433394 SEMA4FO95754 770 aa4.77□□□□□ -1.65
USP54-206ENST00000433394 JCHAINP01591 159 aa4.77□□□□□ -1.65
USP54-206ENST00000433394 WNT2P09544 360 aa4.77□□□□□ -1.65
USP54-206ENST00000433394 HMGCS2P54868 508 aa4.77□□□□□ -1.65
USP54-206ENST00000433394 OTUD4Q01804 1114 aaKnown RBP4.77□□□□□ -1.65
USP54-206ENST00000433394 SELPLGQ14242 412 aa4.77□□□□□ -1.65
USP54-206ENST00000433394 CYP51A1Q16850 503 aa4.77□□□□□ -1.65
USP54-206ENST00000433394 C17orf58Q2M2W7 97 aa4.77□□□□□ -1.65
USP54-206ENST00000433394 HIGD2BQ4VC39 106 aa4.77□□□□□ -1.65
USP54-206ENST00000433394 C14orf177Q52M58 125 aa4.77□□□□□ -1.65
USP54-206ENST00000433394 TEX44Q53QW1 395 aa4.77□□□□□ -1.65
USP54-206ENST00000433394 RABGAP1LQ5R372 815 aa4.77□□□□□ -1.65
USP54-206ENST00000433394 CELF3Q5SZQ8 465 aaKnown RBP4.77□□□□□ -1.65
USP54-206ENST00000433394 OLFML2AQ68BL7 652 aa4.77□□□□□ -1.65
USP54-206ENST00000433394 LEMD1Q68G75 181 aa4.77□□□□□ -1.65
USP54-206ENST00000433394 TMEM225Q6GV28 225 aa4.77□□□□□ -1.65
USP54-206ENST00000433394 SYT10Q6XYQ8 523 aa4.77□□□□□ -1.65
USP54-206ENST00000433394 TIPARPQ7Z3E1 657 aaKnown RBP4.77□□□□□ -1.65
USP54-206ENST00000433394 ACOT1Q86TX2 421 aa4.77□□□□□ -1.65
USP54-206ENST00000433394 SLC47A2Q86VL8 602 aa4.77□□□□□ -1.65
USP54-206ENST00000433394 UNC5CLQ8IV45 518 aa4.77□□□□□ -1.65
USP54-206ENST00000433394 MCOLN2Q8IZK6 566 aa4.77□□□□□ -1.65
USP54-206ENST00000433394 SYT14Q8NB59 555 aa4.77□□□□□ -1.65
USP54-206ENST00000433394 SUMF1Q8NBK3 374 aa4.77□□□□□ -1.65
USP54-206ENST00000433394 STXBP6Q8NFX7 210 aa4.77□□□□□ -1.65
USP54-206ENST00000433394 ZNF671Q8TAW3 534 aa4.77□□□□□ -1.65
USP54-206ENST00000433394 VN1R17PQ8TDU5 208 aa4.77□□□□□ -1.65
USP54-206ENST00000433394 NTNG2Q96CW9 530 aa4.77□□□□□ -1.65
USP54-206ENST00000433394 TESK2Q96S53 571 aa4.77□□□□□ -1.65
USP54-206ENST00000433394 PRODH2Q9UF12 536 aa4.77□□□□□ -1.65
USP54-206ENST00000433394 TBK1Q9UHD2 729 aa4.77□□□□□ -1.65
USP54-206ENST00000433394 RPH3ALQ9UNE2 315 aa4.77□□□□□ -1.65
USP54-206ENST00000433394 MRPS33Q9Y291 106 aaKnown RBP4.77□□□□□ -1.65
USP54-206ENST00000433394 A0A1W2PNV4 684 aa4.76□□□□□ -1.65
USP54-206ENST00000433394 OR6C65A6NJZ3 312 aa4.76□□□□□ -1.65
USP54-206ENST00000433394 FHAD1B1AJZ9 1412 aa4.76□□□□□ -1.65
USP54-206ENST00000433394 STX7O15400 261 aaKnown RBP4.76□□□□□ -1.65
USP54-206ENST00000433394 SCGNO76038 276 aa4.76□□□□□ -1.65
USP54-206ENST00000433394 IGHV3-9P01782 118 aa4.76□□□□□ -1.65
USP54-206ENST00000433394 HOXD4P09016 255 aaPredicted RBP4.76□□□□□ -1.65
USP54-206ENST00000433394 USP6P35125 1406 aa4.76□□□□□ -1.65
USP54-206ENST00000433394 SSR1P43307 286 aaKnown RBP4.76□□□□□ -1.65
USP54-206ENST00000433394 FNTAP49354 379 aa4.76□□□□□ -1.65
USP54-206ENST00000433394 RGS4P49798 205 aa4.76□□□□□ -1.65
USP54-206ENST00000433394 NOVA1P51513 510 aaKnown RBP4.76□□□□□ -1.65
USP54-206ENST00000433394 ACTR1AP61163 376 aa4.76□□□□□ -1.65
USP54-206ENST00000433394 IL18R1Q13478 541 aa4.76□□□□□ -1.65
USP54-206ENST00000433394 PDK3Q15120 406 aa4.76□□□□□ -1.65
USP54-206ENST00000433394 CCDC152Q4G0S7 254 aa4.76□□□□□ -1.65
USP54-206ENST00000433394 ZNF772Q68DY9 489 aaPredicted RBP4.76□□□□□ -1.65
USP54-206ENST00000433394 APTXQ7Z2E3 356 aaKnown RBP4.76□□□□□ -1.65
USP54-206ENST00000433394 MTURNQ8N3F0 131 aa4.76□□□□□ -1.65
USP54-206ENST00000433394 BPIFB2Q8N4F0 458 aa4.76□□□□□ -1.65
USP54-206ENST00000433394 C17orf47Q8NEP4 570 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms