RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 CXCL14O95715 111 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 C1SP09871 688 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 FURINP09958 794 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 GCGRP47871 477 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 SMCO1Q147U7 214 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 CST6Q15828 149 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 ABHD12BQ7Z5M8 362 aaPredicted RBP3.54□□□□□ -1.84
SHPRH-205ENST00000433355 LFNGQ8NES3 379 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 OR2A12Q8NGT7 310 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 ZNF671Q8TAW3 534 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 GNPDA2Q8TDQ7 276 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 CLEC4CQ8WTT0 213 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 MRPL38Q96DV4 380 aaKnown RBP3.54□□□□□ -1.84
SHPRH-205ENST00000433355 SLA2Q9H6Q3 261 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 HCN2Q9UL51 889 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 SNX8Q9Y5X2 465 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 ATP6AP2O75787 350 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 HK1P19367 917 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 RAB38P57729 211 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 RPS7P62081 194 aaKnown RBP3.54□□□□□ -1.84
SHPRH-205ENST00000433355 PHC1P78364 1004 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 SHROOM1Q2M3G4 852 aaPredicted RBP3.54□□□□□ -1.84
SHPRH-205ENST00000433355 GLYR1Q49A26 553 aaPredicted RBP3.54□□□□□ -1.84
SHPRH-205ENST00000433355 NDUFAF5Q5TEU4 345 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 TMEM151AQ8N4L1 468 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 OR4K1Q8NGD4 311 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 AKAP1Q92667 903 aaKnown RBP eCLIP3.54□□□□□ -1.84
SHPRH-205ENST00000433355 DEFB118Q96PH6 123 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 WRAP53Q9BUR4 548 aaKnown RBP3.54□□□□□ -1.84
SHPRH-205ENST00000433355 TAPBPLQ9BX59 468 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 FKRPQ9H9S5 495 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 PSORS1C1Q9UIG5 152 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 ADAMTS6Q9UKP5 1117 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 NPIPB15A6NHN6 443 aaPredicted RBP3.54□□□□□ -1.84
SHPRH-205ENST00000433355 SSX4O60224 188 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 BANF1O75531 89 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 HTR1FP30939 366 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 FMO3P31513 532 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 SEC13P55735 322 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 OR4D1Q15615 310 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 SUSD1Q6UWL2 747 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 SZRD1Q7Z422 152 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 OR2T11Q8NH01 316 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 NEIL3Q8TAT5 605 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 TM9SF4Q92544 642 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 C11orf24Q96F05 449 aaPredicted RBP3.54□□□□□ -1.84
SHPRH-205ENST00000433355 MYOCQ99972 504 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 SMURF1Q9HCE7 757 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 TEX10Q9NXF1 929 aaPredicted RBP3.54□□□□□ -1.84
SHPRH-205ENST00000433355 B3GALT5Q9Y2C3 310 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 CENPEQ02224 2701 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 CYB5AP00167 134 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 SLC5A2P31639 672 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 CD96P40200 585 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 CYP4F2P78329 520 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 ARF5P84085 180 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 NTRK2Q16620 822 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 CTSL3PQ5NE16 218 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 VWA5B2Q8N398 1253 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 SUN5Q8TC36 379 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 ABHD14BQ96IU4 210 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 NECAB3Q96P71 396 aaPredicted RBP3.54□□□□□ -1.84
SHPRH-205ENST00000433355 OR5B2Q96R09 309 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 OSGEPL1Q9H4B0 414 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 GABRQQ9UN88 632 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 ATG4BQ9Y4P1 393 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 ASB1Q9Y576 335 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 POMT1Q9Y6A1 747 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 A0A0D9SEW6 157 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 PLRG1O43660 514 aaKnown RBP3.54□□□□□ -1.84
SHPRH-205ENST00000433355 CREBL2O60519 120 aaPredicted RBP3.54□□□□□ -1.84
SHPRH-205ENST00000433355 SLC16A8O95907 504 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 TFAP2AP05549 437 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 PSKH1P11801 424 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 PPP3CBP16298 524 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 CEBPEQ15744 281 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 FUT11Q495W5 492 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 SGO1Q5FBB7 561 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 UBE2NLQ5JXB2 153 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 ABHD17CQ6PCB6 329 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 LIPIQ6XZB0 460 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 C6orf120Q7Z4R8 191 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 OR5T2Q8NGG2 359 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 WDR20Q8TBZ3 569 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 ZNF778Q96MU6 729 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 SERTAD3Q9UJW9 196 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 HNRNPA2B1P22626 353 aaKnown RBP3.54□□□□□ -1.84
SHPRH-205ENST00000433355 IMPA1P29218 277 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 FRKP42685 505 aaPredicted RBP3.54□□□□□ -1.84
SHPRH-205ENST00000433355 GNG2P59768 71 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 ARF3P61204 181 aaPredicted RBP3.54□□□□□ -1.84
SHPRH-205ENST00000433355 CSNK2A1P68400 391 aaPredicted RBP3.54□□□□□ -1.84
SHPRH-205ENST00000433355 ARF1P84077 181 aaKnown RBP3.54□□□□□ -1.84
SHPRH-205ENST00000433355 GALK2Q01415 458 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 MC1RQ01726 317 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 TMEM164Q5U3C3 297 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 OR4C11Q6IEV9 310 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 SSX9Q7RTT3 188 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 SPATA6LQ8N4H0 392 aa3.54□□□□□ -1.84
SHPRH-205ENST00000433355 TOMM5Q8N4H5 51 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms