RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 SRSF6Q13247 344 aaKnown RBP4.04□□□□□ -1.76
HMGB3P5-201ENST00000428894 SGCGQ13326 291 aa4.04□□□□□ -1.76
HMGB3P5-201ENST00000428894 RAPSNQ13702 412 aa4.04□□□□□ -1.76
HMGB3P5-201ENST00000428894 FZD2Q14332 565 aa4.04□□□□□ -1.76
HMGB3P5-201ENST00000428894 SQLEQ14534 574 aa4.04□□□□□ -1.76
HMGB3P5-201ENST00000428894 NR1D2Q14995 579 aa4.04□□□□□ -1.76
HMGB3P5-201ENST00000428894 STK38Q15208 465 aa4.04□□□□□ -1.76
HMGB3P5-201ENST00000428894 ELOCQ15369 112 aa4.04□□□□□ -1.76
HMGB3P5-201ENST00000428894 DEFB133Q30KQ1 61 aa4.04□□□□□ -1.76
HMGB3P5-201ENST00000428894 LACTB2Q53H82 288 aaPredicted RBP4.04□□□□□ -1.76
HMGB3P5-201ENST00000428894 ZNF542PQ5EBM4 170 aa4.04□□□□□ -1.76
HMGB3P5-201ENST00000428894 RAB41Q5JT25 222 aa4.04□□□□□ -1.76
HMGB3P5-201ENST00000428894 KRTAP5-4Q6L8H1 288 aa4.04□□□□□ -1.76
HMGB3P5-201ENST00000428894 ABRAXAS1Q6UWZ7 409 aa4.04□□□□□ -1.76
HMGB3P5-201ENST00000428894 SCARA5Q6ZMJ2 495 aa4.04□□□□□ -1.76
HMGB3P5-201ENST00000428894 VASH2Q86V25 355 aa4.04□□□□□ -1.76
HMGB3P5-201ENST00000428894 ZFAND4Q86XD8 727 aa4.04□□□□□ -1.76
HMGB3P5-201ENST00000428894 GRAMD2AQ8IUY3 354 aa4.04□□□□□ -1.76
HMGB3P5-201ENST00000428894 EID3Q8N140 333 aa4.04□□□□□ -1.76
HMGB3P5-201ENST00000428894 ARHGAP24Q8N264 748 aa4.04□□□□□ -1.76
HMGB3P5-201ENST00000428894 APOBEC4Q8WW27 367 aaKnown RBP4.04□□□□□ -1.76
HMGB3P5-201ENST00000428894 HTR3CQ8WXA8 447 aa4.04□□□□□ -1.76
HMGB3P5-201ENST00000428894 RBM18Q96H35 190 aaKnown RBP4.04□□□□□ -1.76
HMGB3P5-201ENST00000428894 BMFQ96LC9 184 aa4.04□□□□□ -1.76
HMGB3P5-201ENST00000428894 NSMCE3Q96MG7 304 aa4.04□□□□□ -1.76
HMGB3P5-201ENST00000428894 GPATCH1Q9BRR8 931 aaKnown RBP4.04□□□□□ -1.76
HMGB3P5-201ENST00000428894 LRRC61Q9BV99 259 aa4.04□□□□□ -1.76
HMGB3P5-201ENST00000428894 KRTAP4-4Q9BYR3 166 aa4.04□□□□□ -1.76
HMGB3P5-201ENST00000428894 SLC17A9Q9BYT1 436 aa4.04□□□□□ -1.76
HMGB3P5-201ENST00000428894 FAM129AQ9BZQ8 928 aa4.04□□□□□ -1.76
HMGB3P5-201ENST00000428894 SDCBP2Q9H190 292 aa4.04□□□□□ -1.76
HMGB3P5-201ENST00000428894 LRRN3Q9H3W5 708 aa4.04□□□□□ -1.76
HMGB3P5-201ENST00000428894 ARHGEF38Q9NXL2 777 aa4.04□□□□□ -1.76
HMGB3P5-201ENST00000428894 B3GAT1Q9P2W7 334 aa4.04□□□□□ -1.76
HMGB3P5-201ENST00000428894 ATXN10Q9UBB4 475 aa4.04□□□□□ -1.76
HMGB3P5-201ENST00000428894 CA5BQ9Y2D0 317 aa4.04□□□□□ -1.76
HMGB3P5-201ENST00000428894 SH3GLB1Q9Y371 365 aa4.04□□□□□ -1.76
HMGB3P5-201ENST00000428894 GRIP1Q9Y3R0 1128 aa4.04□□□□□ -1.76
HMGB3P5-201ENST00000428894 CSAG2Q9Y5P2 127 aa4.04□□□□□ -1.76
HMGB3P5-201ENST00000428894 SETD2Q9BYW2 2564 aaPredicted RBP4.04□□□□□ -1.76
HMGB3P5-201ENST00000428894 SVILO95425 2214 aa4.03□□□□□ -1.76
HMGB3P5-201ENST00000428894 SDK2Q58EX2 2172 aa4.03□□□□□ -1.76
HMGB3P5-201ENST00000428894 MEX3AA1L020 520 aaKnown RBP4.03□□□□□ -1.76
HMGB3P5-201ENST00000428894 MACROD2A1Z1Q3 448 aa4.03□□□□□ -1.76
HMGB3P5-201ENST00000428894 EFCAB7A8K855 629 aa4.03□□□□□ -1.76
HMGB3P5-201ENST00000428894 D6RAR5 112 aa4.03□□□□□ -1.76
HMGB3P5-201ENST00000428894 MKRN2OSH3BPM6 223 aa4.03□□□□□ -1.76
HMGB3P5-201ENST00000428894 AP3B1O00203 1094 aa4.03□□□□□ -1.76
HMGB3P5-201ENST00000428894 AP3D1O14617 1153 aa4.03□□□□□ -1.76
HMGB3P5-201ENST00000428894 SULT1B1O43704 296 aa4.03□□□□□ -1.76
HMGB3P5-201ENST00000428894 PRAMEF11O60813 436 aa4.03□□□□□ -1.76
HMGB3P5-201ENST00000428894 TSPAN9O75954 239 aa4.03□□□□□ -1.76
HMGB3P5-201ENST00000428894 SNX4O95219 450 aa4.03□□□□□ -1.76
HMGB3P5-201ENST00000428894 WDPCPO95876 746 aa4.03□□□□□ -1.76
HMGB3P5-201ENST00000428894 ASS1P00966 412 aaKnown RBP4.03□□□□□ -1.76
HMGB3P5-201ENST00000428894 RPLP0P05388 317 aaKnown RBP4.03□□□□□ -1.76
HMGB3P5-201ENST00000428894 KRT7P08729 469 aa4.03□□□□□ -1.76
HMGB3P5-201ENST00000428894 ALPIP09923 528 aa4.03□□□□□ -1.76
HMGB3P5-201ENST00000428894 CTSEP14091 401 aa4.03□□□□□ -1.76
HMGB3P5-201ENST00000428894 MMP12P39900 470 aa4.03□□□□□ -1.76
HMGB3P5-201ENST00000428894 OPRL1P41146 370 aa4.03□□□□□ -1.76
HMGB3P5-201ENST00000428894 SGSHP51688 502 aa4.03□□□□□ -1.76
HMGB3P5-201ENST00000428894 PLK1P53350 603 aa4.03□□□□□ -1.76
HMGB3P5-201ENST00000428894 CCL7P80098 99 aa4.03□□□□□ -1.76
HMGB3P5-201ENST00000428894 MS4A2Q01362 244 aa4.03□□□□□ -1.76
HMGB3P5-201ENST00000428894 ZFP36L1Q07352 338 aaKnown RBP4.03□□□□□ -1.76
HMGB3P5-201ENST00000428894 KLHL30Q0D2K2 578 aa4.03□□□□□ -1.76
HMGB3P5-201ENST00000428894 TRAP1Q12931 704 aaKnown RBP4.03□□□□□ -1.76
HMGB3P5-201ENST00000428894 HSP90AA5PQ58FG0 334 aa4.03□□□□□ -1.76
HMGB3P5-201ENST00000428894 MS4A13Q5J8X5 152 aa4.03□□□□□ -1.76
HMGB3P5-201ENST00000428894 RFWD3Q6PCD5 774 aa4.03□□□□□ -1.76
HMGB3P5-201ENST00000428894 KDELC1Q6UW63 502 aa4.03□□□□□ -1.76
HMGB3P5-201ENST00000428894 C16orf54Q6UWD8 224 aa4.03□□□□□ -1.76
HMGB3P5-201ENST00000428894 GCNT7Q6ZNI0 430 aa4.03□□□□□ -1.76
HMGB3P5-201ENST00000428894 Q6ZRP5 223 aa4.03□□□□□ -1.76
HMGB3P5-201ENST00000428894 PHLDB2Q86SQ0 1253 aa4.03□□□□□ -1.76
HMGB3P5-201ENST00000428894 GKN2Q86XP6 184 aa4.03□□□□□ -1.76
HMGB3P5-201ENST00000428894 C12orf56Q8IXR9 622 aa4.03□□□□□ -1.76
HMGB3P5-201ENST00000428894 CDK20Q8IZL9 346 aa4.03□□□□□ -1.76
HMGB3P5-201ENST00000428894 SLC22A18ASQ8N1D0 253 aa4.03□□□□□ -1.76
HMGB3P5-201ENST00000428894 SIX6OS1Q8N1H7 587 aa4.03□□□□□ -1.76
HMGB3P5-201ENST00000428894 WFDC5Q8TCV5 224 aa4.03□□□□□ -1.76
HMGB3P5-201ENST00000428894 KLK6Q92876 244 aa4.03□□□□□ -1.76
HMGB3P5-201ENST00000428894 SLCO2A1Q92959 643 aa4.03□□□□□ -1.76
HMGB3P5-201ENST00000428894 KIAA1143Q96AT1 154 aaPredicted RBP4.03□□□□□ -1.76
HMGB3P5-201ENST00000428894 DHX58Q96C10 678 aa4.03□□□□□ -1.76
HMGB3P5-201ENST00000428894 SNF8Q96H20 258 aa4.03□□□□□ -1.76
HMGB3P5-201ENST00000428894 PPP1R16AQ96I34 528 aa4.03□□□□□ -1.76
HMGB3P5-201ENST00000428894 SLC45A3Q96JT2 553 aa4.03□□□□□ -1.76
HMGB3P5-201ENST00000428894 SERINC2Q96SA4 455 aa4.03□□□□□ -1.76
HMGB3P5-201ENST00000428894 CGREF1Q99674 301 aa4.03□□□□□ -1.76
HMGB3P5-201ENST00000428894 URM1Q9BTM9 101 aaKnown RBP4.03□□□□□ -1.76
HMGB3P5-201ENST00000428894 EDEM3Q9BZQ6 932 aa4.03□□□□□ -1.76
HMGB3P5-201ENST00000428894 YIPF3Q9GZM5 350 aa4.03□□□□□ -1.76
HMGB3P5-201ENST00000428894 CENPHQ9H3R5 247 aa4.03□□□□□ -1.76
HMGB3P5-201ENST00000428894 CLSTN2Q9H4D0 955 aa4.03□□□□□ -1.76
HMGB3P5-201ENST00000428894 AGPAT3Q9NRZ7 376 aa4.03□□□□□ -1.76
HMGB3P5-201ENST00000428894 NUDT4Q9NZJ9 180 aa4.03□□□□□ -1.76
HMGB3P5-201ENST00000428894 APOBEC3BQ9UH17 382 aaKnown RBP4.03□□□□□ -1.76
HMGB3P5-201ENST00000428894 SLC12A6Q9UHW9 1150 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms