RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 P4HA3Q7Z4N8 544 aa18.75■□□□□ 0.59
HSPG2-205ENST00000427897 OR56A1Q8NGH5 318 aa18.75■□□□□ 0.59
HSPG2-205ENST00000427897 ADAMTS15Q8TE58 950 aa18.75■□□□□ 0.59
HSPG2-205ENST00000427897 MOAP1Q96BY2 351 aa18.75■□□□□ 0.59
HSPG2-205ENST00000427897 COQ8BQ96D53 544 aa18.75■□□□□ 0.59
HSPG2-205ENST00000427897 OTUB1Q96FW1 271 aaPredicted RBP18.75■□□□□ 0.59
HSPG2-205ENST00000427897 C16orf58Q96GQ5 468 aa18.75■□□□□ 0.59
HSPG2-205ENST00000427897 ZNF559Q9BR84 538 aa18.75■□□□□ 0.59
HSPG2-205ENST00000427897 NUF2Q9BZD4 464 aa18.75■□□□□ 0.59
HSPG2-205ENST00000427897 ZNF629Q9UEG4 869 aaPredicted RBP18.75■□□□□ 0.59
HSPG2-205ENST00000427897 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.74■□□□□ 0.59
HSPG2-205ENST00000427897 DYNC1I1O14576 645 aa18.74■□□□□ 0.59
HSPG2-205ENST00000427897 SOX30O94993 753 aa18.74■□□□□ 0.59
HSPG2-205ENST00000427897 KCNK2O95069 426 aa18.74■□□□□ 0.59
HSPG2-205ENST00000427897 PEPDP12955 493 aa18.74■□□□□ 0.59
HSPG2-205ENST00000427897 CEACAM8P31997 349 aaPredicted RBP18.74■□□□□ 0.59
HSPG2-205ENST00000427897 DIO3P55073 304 aa18.74■□□□□ 0.59
HSPG2-205ENST00000427897 GFRA1P56159 465 aa18.74■□□□□ 0.59
HSPG2-205ENST00000427897 TFF3Q07654 80 aa18.74■□□□□ 0.59
HSPG2-205ENST00000427897 SEM1Q6ZVN7 128 aa18.74■□□□□ 0.59
HSPG2-205ENST00000427897 UBQLNLQ8IYU4 475 aa18.74■□□□□ 0.59
HSPG2-205ENST00000427897 MEIOBQ8N635 442 aa18.74■□□□□ 0.59
HSPG2-205ENST00000427897 RNF138Q8WVD3 245 aa18.74■□□□□ 0.59
HSPG2-205ENST00000427897 GIMAP5Q96F15 307 aa18.74■□□□□ 0.59
HSPG2-205ENST00000427897 C14orf79Q96F83 325 aa18.74■□□□□ 0.59
HSPG2-205ENST00000427897 TM9SF2Q99805 663 aa18.74■□□□□ 0.59
HSPG2-205ENST00000427897 TUBA1CQ9BQE3 449 aa18.74■□□□□ 0.59
HSPG2-205ENST00000427897 BTBD2Q9BX70 525 aa18.74■□□□□ 0.59
HSPG2-205ENST00000427897 ACTRT3Q9BYD9 372 aa18.74■□□□□ 0.59
HSPG2-205ENST00000427897 C20orf27Q9GZN8 174 aa18.74■□□□□ 0.59
HSPG2-205ENST00000427897 NEUROD4Q9HD90 331 aa18.74■□□□□ 0.59
HSPG2-205ENST00000427897 NPDC1Q9NQX5 325 aaPredicted RBP18.74■□□□□ 0.59
HSPG2-205ENST00000427897 STOML1Q9UBI4 398 aa18.74■□□□□ 0.59
HSPG2-205ENST00000427897 CACNA1CQ13936 2221 aa18.74■□□□□ 0.59
HSPG2-205ENST00000427897 HCFC1P51610 2035 aa18.74■□□□□ 0.59
HSPG2-205ENST00000427897 NBPF19A0A087WUL8 3843 aa18.74■□□□□ 0.59
HSPG2-205ENST00000427897 ENO4A6NNW6 628 aa18.73■□□□□ 0.59
HSPG2-205ENST00000427897 ZIC3O60481 467 aa18.73■□□□□ 0.59
HSPG2-205ENST00000427897 IGKV1D-16P01601 117 aa18.73■□□□□ 0.59
HSPG2-205ENST00000427897 TMIGD3P0DMS9 266 aaPredicted RBP18.73■□□□□ 0.59
HSPG2-205ENST00000427897 LBPP18428 481 aa18.73■□□□□ 0.59
HSPG2-205ENST00000427897 POU3F2P20265 443 aaPredicted RBP18.73■□□□□ 0.59
HSPG2-205ENST00000427897 CTSSP25774 331 aa18.73■□□□□ 0.59
HSPG2-205ENST00000427897 OPRM1P35372 400 aa18.73■□□□□ 0.59
HSPG2-205ENST00000427897 EEFSECP57772 596 aaKnown RBP18.73■□□□□ 0.59
HSPG2-205ENST00000427897 BST1Q10588 318 aa18.73■□□□□ 0.59
HSPG2-205ENST00000427897 TTMPQ5BVD1 217 aa18.73■□□□□ 0.59
HSPG2-205ENST00000427897 ATG16L1Q676U5 607 aa18.73■□□□□ 0.59
HSPG2-205ENST00000427897 GRAMD2AQ8IUY3 354 aa18.73■□□□□ 0.59
HSPG2-205ENST00000427897 DMRTC2Q8IXT2 367 aaPredicted RBP18.73■□□□□ 0.59
HSPG2-205ENST00000427897 ZNF295-AS1Q8N0V1 137 aa18.73■□□□□ 0.59
HSPG2-205ENST00000427897 FADS6Q8N9I5 356 aa18.73■□□□□ 0.59
HSPG2-205ENST00000427897 VPS37AQ8NEZ2 397 aa18.73■□□□□ 0.59
HSPG2-205ENST00000427897 GOT1L1Q8NHS2 421 aaPredicted RBP18.73■□□□□ 0.59
HSPG2-205ENST00000427897 CDS1Q92903 461 aa18.73■□□□□ 0.59
HSPG2-205ENST00000427897 SORT1Q99523 831 aa18.73■□□□□ 0.59
HSPG2-205ENST00000427897 PIGQQ9BRB3 760 aa18.73■□□□□ 0.59
HSPG2-205ENST00000427897 PIGUQ9H490 435 aa18.73■□□□□ 0.59
HSPG2-205ENST00000427897 UBQLN4Q9NRR5 601 aa18.73■□□□□ 0.59
HSPG2-205ENST00000427897 SIRT3Q9NTG7 399 aaPredicted RBP18.73■□□□□ 0.59
HSPG2-205ENST00000427897 PNPOQ9NVS9 261 aa18.73■□□□□ 0.59
HSPG2-205ENST00000427897 ASIC5Q9NY37 505 aa18.73■□□□□ 0.59
HSPG2-205ENST00000427897 UNC79Q9P2D8 2635 aa18.73■□□□□ 0.59
HSPG2-205ENST00000427897 NAV2Q8IVL1 2488 aa18.73■□□□□ 0.59
HSPG2-205ENST00000427897 MBD3L4A6NDZ8 208 aaPredicted RBP18.72■□□□□ 0.59
HSPG2-205ENST00000427897 MBD3L3A6NE82 208 aaPredicted RBP18.72■□□□□ 0.59
HSPG2-205ENST00000427897 MBD3L5A6NJ08 208 aaPredicted RBP18.72■□□□□ 0.59
HSPG2-205ENST00000427897 C17orf51A8MQB3 221 aa18.72■□□□□ 0.59
HSPG2-205ENST00000427897 KDM4EB2RXH2 506 aaPredicted RBP18.72■□□□□ 0.59
HSPG2-205ENST00000427897 LINC01387J3KSC0 135 aa18.72■□□□□ 0.59
HSPG2-205ENST00000427897 OXSR1O95747 527 aaPredicted RBP18.72■□□□□ 0.59
HSPG2-205ENST00000427897 LCN1P31025 176 aa18.72■□□□□ 0.59
HSPG2-205ENST00000427897 MAP3K8P41279 467 aa18.72■□□□□ 0.59
HSPG2-205ENST00000427897 LHX2P50458 406 aa18.72■□□□□ 0.59
HSPG2-205ENST00000427897 ASCL1P50553 236 aa18.72■□□□□ 0.59
HSPG2-205ENST00000427897 AGFG1P52594 562 aaKnown RBP18.72■□□□□ 0.59
HSPG2-205ENST00000427897 BCL2A1Q16548 175 aa18.72■□□□□ 0.59
HSPG2-205ENST00000427897 HSP90B2PQ58FF3 399 aa18.72■□□□□ 0.59
HSPG2-205ENST00000427897 CCNJQ5T5M9 372 aa18.72■□□□□ 0.59
HSPG2-205ENST00000427897 CDC73Q6P1J9 531 aa18.72■□□□□ 0.59
HSPG2-205ENST00000427897 ARSKQ6UWY0 536 aa18.72■□□□□ 0.59
HSPG2-205ENST00000427897 RIMKLAQ8IXN7 391 aa18.72■□□□□ 0.59
HSPG2-205ENST00000427897 GATSQ8NAP1 163 aa18.72■□□□□ 0.59
HSPG2-205ENST00000427897 ZNF527Q8NB42 609 aa18.72■□□□□ 0.59
HSPG2-205ENST00000427897 OR4C3Q8NH37 302 aa18.72■□□□□ 0.59
HSPG2-205ENST00000427897 MBD3L2Q8NHZ7 208 aaPredicted RBP18.72■□□□□ 0.59
HSPG2-205ENST00000427897 NUDT8Q8WV74 236 aa18.72■□□□□ 0.59
HSPG2-205ENST00000427897 SMPDL3BQ92485 455 aa18.72■□□□□ 0.59
HSPG2-205ENST00000427897 STACQ99469 402 aa18.72■□□□□ 0.59
HSPG2-205ENST00000427897 CXorf36Q9H7Y0 433 aa18.72■□□□□ 0.59
HSPG2-205ENST00000427897 DUSP22Q9NRW4 184 aa18.72■□□□□ 0.59
HSPG2-205ENST00000427897 MAST4O15021 2626 aa18.71■□□□□ 0.59
HSPG2-205ENST00000427897 CLCA1A8K7I4 914 aa18.71■□□□□ 0.59
HSPG2-205ENST00000427897 EEF1E1-BLOC1S5C9J1V9 151 aa18.71■□□□□ 0.59
HSPG2-205ENST00000427897 H3BML4 177 aa18.71■□□□□ 0.59
HSPG2-205ENST00000427897 EEF1E1O43324 174 aaKnown RBP18.71■□□□□ 0.59
HSPG2-205ENST00000427897 TBXA2RP21731 343 aa18.71■□□□□ 0.59
HSPG2-205ENST00000427897 PEX19P40855 299 aa18.71■□□□□ 0.59
HSPG2-205ENST00000427897 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.71■□□□□ 0.59
HSPG2-205ENST00000427897 OR4F3Q6IEY1 312 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms