RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 FBN2P35556 2912 aa8.4□□□□□ -1.06
NUP50-206ENST00000422489 PDZD2O15018 2839 aa8.39□□□□□ -1.07
NUP50-206ENST00000422489 GTF3C1Q12789 2109 aa8.39□□□□□ -1.07
NUP50-206ENST00000422489 ABCA12Q86UK0 2595 aa8.39□□□□□ -1.07
NUP50-206ENST00000422489 SLC22A20A6NK97 555 aa8.39□□□□□ -1.07
NUP50-206ENST00000422489 H0YC42 278 aa8.39□□□□□ -1.07
NUP50-206ENST00000422489 RGS16O15492 202 aaPredicted RBP8.39□□□□□ -1.07
NUP50-206ENST00000422489 CFLARO15519 480 aa8.39□□□□□ -1.07
NUP50-206ENST00000422489 NDUFB5O43674 189 aa8.39□□□□□ -1.07
NUP50-206ENST00000422489 HSPA4LO95757 839 aa8.39□□□□□ -1.07
NUP50-206ENST00000422489 BPGMP07738 259 aa8.39□□□□□ -1.07
NUP50-206ENST00000422489 LAMP1P11279 417 aa8.39□□□□□ -1.07
NUP50-206ENST00000422489 EPXP11678 715 aa8.39□□□□□ -1.07
NUP50-206ENST00000422489 DNASE1P24855 282 aa8.39□□□□□ -1.07
NUP50-206ENST00000422489 RPL3P39023 403 aaKnown RBP8.39□□□□□ -1.07
NUP50-206ENST00000422489 PRIM2P49643 509 aa8.39□□□□□ -1.07
NUP50-206ENST00000422489 SUCLG1P53597 346 aaKnown RBP8.39□□□□□ -1.07
NUP50-206ENST00000422489 TPD52P55327 224 aaPredicted RBP8.39□□□□□ -1.07
NUP50-206ENST00000422489 CLDN20P56880 219 aa8.39□□□□□ -1.07
NUP50-206ENST00000422489 EEF1A1P68104 462 aaKnown RBP8.39□□□□□ -1.07
NUP50-206ENST00000422489 SIRPAP78324 504 aa8.39□□□□□ -1.07
NUP50-206ENST00000422489 PRR5P85299 388 aa8.39□□□□□ -1.07
NUP50-206ENST00000422489 PDE7AQ13946 482 aa8.39□□□□□ -1.07
NUP50-206ENST00000422489 POU4F3Q15319 338 aa8.39□□□□□ -1.07
NUP50-206ENST00000422489 DUSP5Q16690 384 aa8.39□□□□□ -1.07
NUP50-206ENST00000422489 PGS1Q32NB8 556 aa8.39□□□□□ -1.07
NUP50-206ENST00000422489 KRT71Q3SY84 523 aa8.39□□□□□ -1.07
NUP50-206ENST00000422489 GLYR1Q49A26 553 aaPredicted RBP8.39□□□□□ -1.07
NUP50-206ENST00000422489 C6orf136Q5SQH8 315 aa8.39□□□□□ -1.07
NUP50-206ENST00000422489 CCNJQ5T5M9 372 aa8.39□□□□□ -1.07
NUP50-206ENST00000422489 EEF1A1P5Q5VTE0 462 aa8.39□□□□□ -1.07
NUP50-206ENST00000422489 OR2A2Q6IF42 318 aa8.39□□□□□ -1.07
NUP50-206ENST00000422489 MFSD12Q6NUT3 480 aa8.39□□□□□ -1.07
NUP50-206ENST00000422489 WDR93Q6P2C0 686 aa8.39□□□□□ -1.07
NUP50-206ENST00000422489 RNF165Q6ZSG1 346 aa8.39□□□□□ -1.07
NUP50-206ENST00000422489 ADGRE4PQ86SQ3 457 aa8.39□□□□□ -1.07
NUP50-206ENST00000422489 CDC20BQ86Y33 519 aa8.39□□□□□ -1.07
NUP50-206ENST00000422489 COX18Q8N8Q8 333 aa8.39□□□□□ -1.07
NUP50-206ENST00000422489 OR6Y1Q8NGX8 325 aa8.39□□□□□ -1.07
NUP50-206ENST00000422489 RNF138Q8WVD3 245 aa8.39□□□□□ -1.07
NUP50-206ENST00000422489 OR5P2Q8WZ92 322 aa8.39□□□□□ -1.07
NUP50-206ENST00000422489 FIG4Q92562 907 aa8.39□□□□□ -1.07
NUP50-206ENST00000422489 CAVIN3Q969G5 261 aa8.39□□□□□ -1.07
NUP50-206ENST00000422489 C1GALT1C1Q96EU7 318 aa8.39□□□□□ -1.07
NUP50-206ENST00000422489 SH3YL1Q96HL8 342 aaPredicted RBP8.39□□□□□ -1.07
NUP50-206ENST00000422489 PPP1R36Q96LQ0 422 aa8.39□□□□□ -1.07
NUP50-206ENST00000422489 C3orf30Q96M34 536 aa8.39□□□□□ -1.07
NUP50-206ENST00000422489 ZFP3Q96NJ6 502 aa8.39□□□□□ -1.07
NUP50-206ENST00000422489 UCN2Q96RP3 112 aa8.39□□□□□ -1.07
NUP50-206ENST00000422489 PRPF18Q99633 342 aaKnown RBP8.39□□□□□ -1.07
NUP50-206ENST00000422489 PIGQQ9BRB3 760 aa8.39□□□□□ -1.07
NUP50-206ENST00000422489 PINK1Q9BXM7 581 aa8.39□□□□□ -1.07
NUP50-206ENST00000422489 PARD6BQ9BYG5 372 aa8.39□□□□□ -1.07
NUP50-206ENST00000422489 PRRG4Q9BZD6 226 aa8.39□□□□□ -1.07
NUP50-206ENST00000422489 ACBD3Q9H3P7 528 aa8.39□□□□□ -1.07
NUP50-206ENST00000422489 PIGMQ9H3S5 423 aa8.39□□□□□ -1.07
NUP50-206ENST00000422489 KCNK9Q9NPC2 374 aa8.39□□□□□ -1.07
NUP50-206ENST00000422489 CCM2LQ9NUG4 571 aaPredicted RBP8.39□□□□□ -1.07
NUP50-206ENST00000422489 FBXO34Q9NWN3 711 aa8.39□□□□□ -1.07
NUP50-206ENST00000422489 JKAMPQ9P055 326 aa8.39□□□□□ -1.07
NUP50-206ENST00000422489 ATP6V1HQ9UI12 483 aa8.39□□□□□ -1.07
NUP50-206ENST00000422489 EDARQ9UNE0 448 aa8.39□□□□□ -1.07
NUP50-206ENST00000422489 EIF3LQ9Y262 564 aaKnown RBP8.39□□□□□ -1.07
NUP50-206ENST00000422489 VDAC3Q9Y277 283 aa8.39□□□□□ -1.07
NUP50-206ENST00000422489 PLEKHA6Q9Y2H5 1048 aa8.39□□□□□ -1.07
NUP50-206ENST00000422489 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.38□□□□□ -1.07
NUP50-206ENST00000422489 UQCRHLA0A096LP55 91 aa8.38□□□□□ -1.07
NUP50-206ENST00000422489 A0A1W2PNV4 684 aa8.38□□□□□ -1.07
NUP50-206ENST00000422489 A8MXE2 369 aa8.38□□□□□ -1.07
NUP50-206ENST00000422489 LINC01387J3KSC0 135 aa8.38□□□□□ -1.07
NUP50-206ENST00000422489 SCDO00767 359 aa8.38□□□□□ -1.07
NUP50-206ENST00000422489 EIF1AYO14602 144 aaKnown RBP8.38□□□□□ -1.07
NUP50-206ENST00000422489 SCAMP2O15127 329 aaKnown RBP8.38□□□□□ -1.07
NUP50-206ENST00000422489 TNFRSF21O75509 655 aa8.38□□□□□ -1.07
NUP50-206ENST00000422489 LYPLA1O75608 230 aaPredicted RBP8.38□□□□□ -1.07
NUP50-206ENST00000422489 KCNK2O95069 426 aa8.38□□□□□ -1.07
NUP50-206ENST00000422489 OXSR1O95747 527 aaPredicted RBP8.38□□□□□ -1.07
NUP50-206ENST00000422489 HMGN2P05204 90 aaKnown RBP8.38□□□□□ -1.07
NUP50-206ENST00000422489 IFI6P09912 130 aa8.38□□□□□ -1.07
NUP50-206ENST00000422489 CD1EP15812 388 aa8.38□□□□□ -1.07
NUP50-206ENST00000422489 ATP6V1C1P21283 382 aa8.38□□□□□ -1.07
NUP50-206ENST00000422489 TBXA2RP21731 343 aa8.38□□□□□ -1.07
NUP50-206ENST00000422489 ARRB2P32121 409 aa8.38□□□□□ -1.07
NUP50-206ENST00000422489 CPOXP36551 454 aa8.38□□□□□ -1.07
NUP50-206ENST00000422489 SERPINB5P36952 375 aa8.38□□□□□ -1.07
NUP50-206ENST00000422489 KCNJ5P48544 419 aa8.38□□□□□ -1.07
NUP50-206ENST00000422489 SERPINB4P48594 390 aa8.38□□□□□ -1.07
NUP50-206ENST00000422489 CCT3P49368 545 aaKnown RBP8.38□□□□□ -1.07
NUP50-206ENST00000422489 RNF144AP50876 292 aaPredicted RBP8.38□□□□□ -1.07
NUP50-206ENST00000422489 CLDN15P56746 228 aa8.38□□□□□ -1.07
NUP50-206ENST00000422489 RPS3AP61247 264 aaKnown RBP8.38□□□□□ -1.07
NUP50-206ENST00000422489 POU6F2P78424 691 aaPredicted RBP8.38□□□□□ -1.07
NUP50-206ENST00000422489 TP53BP2Q13625 1128 aa8.38□□□□□ -1.07
NUP50-206ENST00000422489 GANABQ14697 944 aaKnown RBP8.38□□□□□ -1.07
NUP50-206ENST00000422489 LASP1Q14847 261 aaKnown RBP8.38□□□□□ -1.07
NUP50-206ENST00000422489 PTGR1Q14914 329 aa8.38□□□□□ -1.07
NUP50-206ENST00000422489 DAZAP2Q15038 168 aaPredicted RBP8.38□□□□□ -1.07
NUP50-206ENST00000422489 TESK1Q15569 626 aa8.38□□□□□ -1.07
NUP50-206ENST00000422489 LSM12Q3MHD2 195 aaKnown RBP8.38□□□□□ -1.07
NUP50-206ENST00000422489 ZCCHC12Q6PEW1 402 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms