RNA–Protein interactions for RNA: ENST00000422070.8

RBFOX1-204, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-204ENST00000422070 PGDP52209 483 aa17.48■□□□□ 0.39
RBFOX1-204ENST00000422070 ELAVL1Q15717 326 aaKnown RBP17.48■□□□□ 0.39
RBFOX1-204ENST00000422070 ZNF141Q15928 474 aa17.48■□□□□ 0.39
RBFOX1-204ENST00000422070 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.48■□□□□ 0.39
RBFOX1-204ENST00000422070 PRAMEF17Q5VTA0 474 aa17.48■□□□□ 0.39
RBFOX1-204ENST00000422070 XAF1Q6GPH4 301 aa17.48■□□□□ 0.39
RBFOX1-204ENST00000422070 LAIR1Q6GTX8 287 aa17.48■□□□□ 0.39
RBFOX1-204ENST00000422070 Q6ZPB1 254 aaPredicted RBP17.48■□□□□ 0.39
RBFOX1-204ENST00000422070 PAK1IP1Q9NWT1 392 aaPredicted RBP17.48■□□□□ 0.39
RBFOX1-204ENST00000422070 DTX4Q9Y2E6 619 aa17.48■□□□□ 0.39
RBFOX1-204ENST00000422070 COL5A1P20908 1838 aaPredicted RBP17.47■□□□□ 0.39
RBFOX1-204ENST00000422070 ASXL3Q9C0F0 2248 aa17.47■□□□□ 0.39
RBFOX1-204ENST00000422070 IGLV3-12A0A075B6K2 115 aa17.47■□□□□ 0.39
RBFOX1-204ENST00000422070 OR2W5A6NFC9 320 aa17.47■□□□□ 0.39
RBFOX1-204ENST00000422070 IGKV3-11P04433 115 aa17.47■□□□□ 0.39
RBFOX1-204ENST00000422070 DRD5P21918 477 aa17.47■□□□□ 0.39
RBFOX1-204ENST00000422070 FMO3P31513 532 aa17.47■□□□□ 0.39
RBFOX1-204ENST00000422070 RP1P56715 2156 aa17.47■□□□□ 0.39
RBFOX1-204ENST00000422070 SLC37A1P57057 533 aa17.47■□□□□ 0.39
RBFOX1-204ENST00000422070 TUBA3CQ13748 450 aa17.47■□□□□ 0.39
RBFOX1-204ENST00000422070 SLX4IPQ5VYV7 408 aa17.47■□□□□ 0.39
RBFOX1-204ENST00000422070 P3H2Q8IVL5 708 aa17.47■□□□□ 0.39
RBFOX1-204ENST00000422070 CMIPQ8IY22 773 aa17.47■□□□□ 0.39
RBFOX1-204ENST00000422070 RCBTB1Q8NDN9 531 aa17.47■□□□□ 0.39
RBFOX1-204ENST00000422070 IFI44Q8TCB0 444 aa17.47■□□□□ 0.39
RBFOX1-204ENST00000422070 TMIGD2Q96BF3 282 aa17.47■□□□□ 0.39
RBFOX1-204ENST00000422070 SLC41A3Q96GZ6 507 aa17.47■□□□□ 0.39
RBFOX1-204ENST00000422070 SENP5Q96HI0 755 aaPredicted RBP17.47■□□□□ 0.39
RBFOX1-204ENST00000422070 SLC46A1Q96NT5 459 aa17.47■□□□□ 0.39
RBFOX1-204ENST00000422070 RASSF1Q9NS23 344 aa17.47■□□□□ 0.39
RBFOX1-204ENST00000422070 SIDT1Q9NXL6 827 aaKnown RBP17.47■□□□□ 0.39
RBFOX1-204ENST00000422070 SNX5Q9Y5X3 404 aa17.47■□□□□ 0.39
RBFOX1-204ENST00000422070 XPNPEP2O43895 674 aa17.46■□□□□ 0.39
RBFOX1-204ENST00000422070 ONECUT2O95948 504 aa17.46■□□□□ 0.39
RBFOX1-204ENST00000422070 TP53P04637 393 aaPredicted RBP17.46■□□□□ 0.39
RBFOX1-204ENST00000422070 ZNF883P0CG24 379 aa17.46■□□□□ 0.39
RBFOX1-204ENST00000422070 SP9P0CG40 484 aa17.46■□□□□ 0.39
RBFOX1-204ENST00000422070 TNNI3P19429 210 aa17.46■□□□□ 0.39
RBFOX1-204ENST00000422070 IDH2P48735 452 aaKnown RBP17.46■□□□□ 0.39
RBFOX1-204ENST00000422070 C12orf73Q69YU5 71 aa17.46■□□□□ 0.39
RBFOX1-204ENST00000422070 GDF7Q7Z4P5 450 aa17.46■□□□□ 0.39
RBFOX1-204ENST00000422070 ZAR1Q86SH2 424 aa17.46■□□□□ 0.39
RBFOX1-204ENST00000422070 BPHLQ86WA6 291 aaPredicted RBP17.46■□□□□ 0.39
RBFOX1-204ENST00000422070 GNPDA2Q8TDQ7 276 aa17.46■□□□□ 0.39
RBFOX1-204ENST00000422070 ART5Q96L15 291 aa17.46■□□□□ 0.39
RBFOX1-204ENST00000422070 CCDC74BQ96LY2 380 aa17.46■□□□□ 0.39
RBFOX1-204ENST00000422070 SIGLEC11Q96RL6 698 aa17.46■□□□□ 0.39
RBFOX1-204ENST00000422070 YIPF2Q9BWQ6 316 aa17.46■□□□□ 0.39
RBFOX1-204ENST00000422070 ITPAQ9BY32 194 aa17.46■□□□□ 0.39
RBFOX1-204ENST00000422070 YIPF3Q9GZM5 350 aa17.46■□□□□ 0.39
RBFOX1-204ENST00000422070 IMPAD1Q9NX62 359 aa17.46■□□□□ 0.39
RBFOX1-204ENST00000422070 ZNF226Q9NYT6 803 aa17.46■□□□□ 0.39
RBFOX1-204ENST00000422070 RSL24D1Q9UHA3 163 aaKnown RBP17.46■□□□□ 0.39
RBFOX1-204ENST00000422070 CBLCQ9ULV8 474 aa17.46■□□□□ 0.39
RBFOX1-204ENST00000422070 COMMD3-BMI1R4GMX3 469 aa17.46■□□□□ 0.39
RBFOX1-204ENST00000422070 SDK1Q7Z5N4 2213 aa17.46■□□□□ 0.39
RBFOX1-204ENST00000422070 UNC13CQ8NB66 2214 aa17.46■□□□□ 0.39
RBFOX1-204ENST00000422070 LAMA1P25391 3075 aa17.46■□□□□ 0.39
RBFOX1-204ENST00000422070 TRAPPC13A5PLN9 417 aa17.45■□□□□ 0.38
RBFOX1-204ENST00000422070 IGKV1D-16P01601 117 aa17.45■□□□□ 0.38
RBFOX1-204ENST00000422070 ITIH1P19827 911 aa17.45■□□□□ 0.38
RBFOX1-204ENST00000422070 GSSP48637 474 aa17.45■□□□□ 0.38
RBFOX1-204ENST00000422070 TSPAN31Q12999 210 aa17.45■□□□□ 0.38
RBFOX1-204ENST00000422070 PMS2P3Q13401 168 aa17.45■□□□□ 0.38
RBFOX1-204ENST00000422070 RAB39AQ14964 217 aa17.45■□□□□ 0.38
RBFOX1-204ENST00000422070 MINDY4Q4G0A6 757 aa17.45■□□□□ 0.38
RBFOX1-204ENST00000422070 TMEM151BQ8IW70 566 aa17.45■□□□□ 0.38
RBFOX1-204ENST00000422070 PLPP5Q8NEB5 264 aa17.45■□□□□ 0.38
RBFOX1-204ENST00000422070 OR4N2Q8NGD1 307 aa17.45■□□□□ 0.38
RBFOX1-204ENST00000422070 OR13F1Q8NGS4 319 aa17.45■□□□□ 0.38
RBFOX1-204ENST00000422070 OR14A16Q8NHC5 309 aa17.45■□□□□ 0.38
RBFOX1-204ENST00000422070 ZNF420Q8TAQ5 688 aaPredicted RBP17.45■□□□□ 0.38
RBFOX1-204ENST00000422070 TRUB1Q8WWH5 349 aaKnown RBP17.45■□□□□ 0.38
RBFOX1-204ENST00000422070 TSLPQ969D9 159 aa17.45■□□□□ 0.38
RBFOX1-204ENST00000422070 UBE2FQ969M7 185 aa17.45■□□□□ 0.38
RBFOX1-204ENST00000422070 CTPS2Q9NRF8 586 aa17.45■□□□□ 0.38
RBFOX1-204ENST00000422070 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.45■□□□□ 0.38
RBFOX1-204ENST00000422070 RARRES3Q9UL19 164 aa17.45■□□□□ 0.38
RBFOX1-204ENST00000422070 SH3D21A4FU49 640 aa17.45■□□□□ 0.38
RBFOX1-204ENST00000422070 H3BSA7 217 aa17.45■□□□□ 0.38
RBFOX1-204ENST00000422070 POLR1CO15160 346 aaPredicted RBP17.45■□□□□ 0.38
RBFOX1-204ENST00000422070 FAM20BO75063 409 aa17.45■□□□□ 0.38
RBFOX1-204ENST00000422070 THY1P04216 161 aa17.45■□□□□ 0.38
RBFOX1-204ENST00000422070 HBQ1P09105 142 aa17.45■□□□□ 0.38
RBFOX1-204ENST00000422070 PCMT1P22061 227 aa17.45■□□□□ 0.38
RBFOX1-204ENST00000422070 PPICP45877 212 aa17.45■□□□□ 0.38
RBFOX1-204ENST00000422070 OMPP47874 163 aa17.45■□□□□ 0.38
RBFOX1-204ENST00000422070 ATP12AP54707 1039 aa17.45■□□□□ 0.38
RBFOX1-204ENST00000422070 SH3BGRP55822 239 aaPredicted RBP17.45■□□□□ 0.38
RBFOX1-204ENST00000422070 DCAF7P61962 342 aa17.45■□□□□ 0.38
RBFOX1-204ENST00000422070 DAB2P98082 770 aa17.45■□□□□ 0.38
RBFOX1-204ENST00000422070 PLAURQ03405 335 aa17.45■□□□□ 0.38
RBFOX1-204ENST00000422070 MVKQ03426 396 aa17.45■□□□□ 0.38
RBFOX1-204ENST00000422070 FGFBP1Q14512 234 aa17.45■□□□□ 0.38
RBFOX1-204ENST00000422070 GTF2IRD2BQ6EKJ0 949 aa17.45■□□□□ 0.38
RBFOX1-204ENST00000422070 ZNF730Q6ZMV8 503 aa17.45■□□□□ 0.38
RBFOX1-204ENST00000422070 MBOAT2Q6ZWT7 520 aa17.45■□□□□ 0.38
RBFOX1-204ENST00000422070 COX15Q7KZN9 410 aa17.45■□□□□ 0.38
RBFOX1-204ENST00000422070 PRSS48Q7RTY5 328 aa17.45■□□□□ 0.38
RBFOX1-204ENST00000422070 GTF2IRD2Q86UP8 949 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms