RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 EFCAB11Q9BUY7 163 aa15.58■□□□□ 0.08
PKP4-204ENST00000421462 ALG8Q9BVK2 526 aa15.58■□□□□ 0.08
PKP4-204ENST00000421462 ZNF436Q9C0F3 470 aaPredicted RBP15.58■□□□□ 0.08
PKP4-204ENST00000421462 MRPL39Q9NYK5 338 aaKnown RBP15.58■□□□□ 0.08
PKP4-204ENST00000421462 AUP1Q9Y679 476 aa15.58■□□□□ 0.08
PKP4-204ENST00000421462 L7N2F9 121 aa15.58■□□□□ 0.08
PKP4-204ENST00000421462 EPPINO95925 133 aa15.58■□□□□ 0.08
PKP4-204ENST00000421462 TFP02787 698 aa15.58■□□□□ 0.08
PKP4-204ENST00000421462 DNAJB7Q7Z6W7 309 aaPredicted RBP15.58■□□□□ 0.08
PKP4-204ENST00000421462 VRK2Q86Y07 508 aa15.58■□□□□ 0.08
PKP4-204ENST00000421462 ZNF485Q8NCK3 441 aa15.58■□□□□ 0.08
PKP4-204ENST00000421462 AUTS2Q8WXX7 1259 aa15.58■□□□□ 0.08
PKP4-204ENST00000421462 SAMD8Q96LT4 415 aa15.58■□□□□ 0.08
PKP4-204ENST00000421462 SEMA4GQ9NTN9 838 aa15.58■□□□□ 0.08
PKP4-204ENST00000421462 CXXC1Q9P0U4 656 aaPredicted RBP15.58■□□□□ 0.08
PKP4-204ENST00000421462 BAIAP2Q9UQB8 552 aa15.58■□□□□ 0.08
PKP4-204ENST00000421462 ASB4Q9Y574 426 aa15.58■□□□□ 0.08
PKP4-204ENST00000421462 DAPL1A0PJW8 107 aa15.57■□□□□ 0.08
PKP4-204ENST00000421462 IRGMA1A4Y4 181 aa15.57■□□□□ 0.08
PKP4-204ENST00000421462 C1orf105O95561 183 aa15.57■□□□□ 0.08
PKP4-204ENST00000421462 APOC3P02656 99 aa15.57■□□□□ 0.08
PKP4-204ENST00000421462 IFNA16P05015 189 aa15.57■□□□□ 0.08
PKP4-204ENST00000421462 PTHLHP12272 177 aa15.57■□□□□ 0.08
PKP4-204ENST00000421462 CCND3P30281 292 aaPredicted RBP15.57■□□□□ 0.08
PKP4-204ENST00000421462 SIM1P81133 766 aaPredicted RBP15.57■□□□□ 0.08
PKP4-204ENST00000421462 DUSP6Q16828 381 aa15.57■□□□□ 0.08
PKP4-204ENST00000421462 NXPE4Q6UWF7 544 aa15.57■□□□□ 0.08
PKP4-204ENST00000421462 C3P1Q6ZMU1 363 aa15.57■□□□□ 0.08
PKP4-204ENST00000421462 OR5P2Q8WZ92 322 aa15.57■□□□□ 0.08
PKP4-204ENST00000421462 SGTBQ96EQ0 304 aa15.57■□□□□ 0.08
PKP4-204ENST00000421462 C16orf58Q96GQ5 468 aa15.57■□□□□ 0.08
PKP4-204ENST00000421462 SAV1Q9H4B6 383 aaPredicted RBP15.57■□□□□ 0.08
PKP4-204ENST00000421462 C11orf49Q9H6J7 331 aa15.57■□□□□ 0.08
PKP4-204ENST00000421462 LIN7BQ9HAP6 207 aa15.57■□□□□ 0.08
PKP4-204ENST00000421462 MGAT4CQ9UBM8 478 aa15.57■□□□□ 0.08
PKP4-204ENST00000421462 SCP2D1Q9UJQ7 156 aa15.57■□□□□ 0.08
PKP4-204ENST00000421462 KCNE3Q9Y6H6 103 aa15.57■□□□□ 0.08
PKP4-204ENST00000421462 MEIKINA0A087WXM9 373 aa15.57■□□□□ 0.08
PKP4-204ENST00000421462 GMDSO60547 372 aa15.57■□□□□ 0.08
PKP4-204ENST00000421462 CHRM4P08173 479 aa15.57■□□□□ 0.08
PKP4-204ENST00000421462 AKR1D1P51857 326 aa15.57■□□□□ 0.08
PKP4-204ENST00000421462 MAZP56270 477 aaKnown RBP15.57■□□□□ 0.08
PKP4-204ENST00000421462 NDUFA9Q16795 377 aa15.57■□□□□ 0.08
PKP4-204ENST00000421462 CDC73Q6P1J9 531 aa15.57■□□□□ 0.08
PKP4-204ENST00000421462 SLC9B2Q86UD5 537 aa15.57■□□□□ 0.08
PKP4-204ENST00000421462 ZNF671Q8TAW3 534 aa15.57■□□□□ 0.08
PKP4-204ENST00000421462 THAP4Q8WY91 577 aa15.57■□□□□ 0.08
PKP4-204ENST00000421462 YIPF5Q969M3 257 aa15.57■□□□□ 0.08
PKP4-204ENST00000421462 FUZQ9BT04 418 aa15.57■□□□□ 0.08
PKP4-204ENST00000421462 RETREG1Q9H6L5 497 aa15.57■□□□□ 0.08
PKP4-204ENST00000421462 ELAC1Q9H777 363 aaKnown RBP15.57■□□□□ 0.08
PKP4-204ENST00000421462 SIRT3Q9NTG7 399 aaPredicted RBP15.57■□□□□ 0.08
PKP4-204ENST00000421462 SCN2AQ99250 2005 aa15.57■□□□□ 0.08
PKP4-204ENST00000421462 GALTP07902 379 aa15.57■□□□□ 0.08
PKP4-204ENST00000421462 RBMS1P29558 406 aaKnown RBP15.57■□□□□ 0.08
PKP4-204ENST00000421462 EFNB1P98172 346 aa15.57■□□□□ 0.08
PKP4-204ENST00000421462 C9orf131Q5VYM1 1079 aa15.57■□□□□ 0.08
PKP4-204ENST00000421462 PYHIN1Q6K0P9 492 aa15.57■□□□□ 0.08
PKP4-204ENST00000421462 LINGO2Q7L985 606 aa15.57■□□□□ 0.08
PKP4-204ENST00000421462 OR2T4Q8NH00 348 aa15.57■□□□□ 0.08
PKP4-204ENST00000421462 ACOT12Q8WYK0 555 aa15.57■□□□□ 0.08
PKP4-204ENST00000421462 TM4SF18Q96CE8 201 aa15.57■□□□□ 0.08
PKP4-204ENST00000421462 LYSMD1Q96S90 227 aa15.57■□□□□ 0.08
PKP4-204ENST00000421462 ZNF69Q9UC07 566 aa15.57■□□□□ 0.08
PKP4-204ENST00000421462 FBXL2Q9UKC9 423 aa15.57■□□□□ 0.08
PKP4-204ENST00000421462 KCNMB2Q9Y691 235 aa15.57■□□□□ 0.08
PKP4-204ENST00000421462 SESN1Q9Y6P5 492 aa15.57■□□□□ 0.08
PKP4-204ENST00000421462 KIAA1671Q9BY89 1806 aa15.56■□□□□ 0.08
PKP4-204ENST00000421462 HLA-FP30511 346 aa15.56■□□□□ 0.08
PKP4-204ENST00000421462 RIN1Q13671 783 aa15.56■□□□□ 0.08
PKP4-204ENST00000421462 C17orf47Q8NEP4 570 aa15.56■□□□□ 0.08
PKP4-204ENST00000421462 OR5W2Q8NH69 310 aa15.56■□□□□ 0.08
PKP4-204ENST00000421462 FGF11Q92914 225 aa15.56■□□□□ 0.08
PKP4-204ENST00000421462 FAIM2Q9BWQ8 316 aa15.56■□□□□ 0.08
PKP4-204ENST00000421462 OR2AG1Q9H205 316 aa15.56■□□□□ 0.08
PKP4-204ENST00000421462 TTYH1Q9H313 450 aaPredicted RBP15.56■□□□□ 0.08
PKP4-204ENST00000421462 RCE1Q9Y256 329 aa15.56■□□□□ 0.08
PKP4-204ENST00000421462 MYO7AQ13402 2215 aa15.56■□□□□ 0.08
PKP4-204ENST00000421462 TRABD2BA6NFA1 517 aa15.56■□□□□ 0.08
PKP4-204ENST00000421462 KHNYNO15037 678 aaKnown RBP15.56■□□□□ 0.08
PKP4-204ENST00000421462 GYPBP06028 91 aa15.56■□□□□ 0.08
PKP4-204ENST00000421462 NPR2P20594 1047 aa15.56■□□□□ 0.08
PKP4-204ENST00000421462 GSTM3P21266 225 aa15.56■□□□□ 0.08
PKP4-204ENST00000421462 PTBP1P26599 531 aaKnown RBP eCLIP15.56■□□□□ 0.089e-7■■■■■ 35.5
PKP4-204ENST00000421462 PSMB5P28074 263 aa15.56■□□□□ 0.08
PKP4-204ENST00000421462 GCGRP47871 477 aa15.56■□□□□ 0.08
PKP4-204ENST00000421462 ENTPD8Q5MY95 495 aa15.56■□□□□ 0.08
PKP4-204ENST00000421462 ZNF697Q5TEC3 545 aa15.56■□□□□ 0.08
PKP4-204ENST00000421462 ADAMTS14Q8WXS8 1223 aa15.56■□□□□ 0.08
PKP4-204ENST00000421462 PRRC1Q96M27 445 aa15.56■□□□□ 0.08
PKP4-204ENST00000421462 BABAM2Q9NXR7 383 aa15.56■□□□□ 0.08
PKP4-204ENST00000421462 TAC3Q9UHF0 121 aa15.56■□□□□ 0.08
PKP4-204ENST00000421462 ACAD8Q9UKU7 415 aa15.56■□□□□ 0.08
PKP4-204ENST00000421462 ASF1AQ9Y294 204 aa15.56■□□□□ 0.08
PKP4-204ENST00000421462 AK6Q9Y3D8 172 aaKnown RBP15.56■□□□□ 0.08
PKP4-204ENST00000421462 YIPF1Q9Y548 306 aa15.56■□□□□ 0.08
PKP4-204ENST00000421462 KDM4EB2RXH2 506 aaPredicted RBP15.55■□□□□ 0.08
PKP4-204ENST00000421462 FOXE1O00358 373 aaPredicted RBP15.55■□□□□ 0.08
PKP4-204ENST00000421462 ARPC1BO15143 372 aaKnown RBP15.55■□□□□ 0.08
PKP4-204ENST00000421462 ARPC5O15511 151 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms