RNA–Protein interactions for RNA: ENST00000420794.2

BDNF-209, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-209ENST00000420794 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.88□□□□□ -1.31
BDNF-209ENST00000420794 VRK2Q86Y07 508 aa6.88□□□□□ -1.31
BDNF-209ENST00000420794 SLC34A3Q8N130 599 aa6.88□□□□□ -1.31
BDNF-209ENST00000420794 ZNF285Q96NJ3 590 aa6.88□□□□□ -1.31
BDNF-209ENST00000420794 GPATCH2Q9NW75 528 aa6.88□□□□□ -1.31
BDNF-209ENST00000420794 PPP4R1LQ9P1A2 415 aa6.88□□□□□ -1.31
BDNF-209ENST00000420794 CNOT11Q9UKZ1 510 aaKnown RBP6.88□□□□□ -1.31
BDNF-209ENST00000420794 TMEM5Q9Y2B1 443 aa6.88□□□□□ -1.31
BDNF-209ENST00000420794 PLXNB3Q9ULL4 1909 aa6.88□□□□□ -1.31
BDNF-209ENST00000420794 SCN3AQ9NY46 2000 aa6.88□□□□□ -1.31
BDNF-209ENST00000420794 ZNF106Q9H2Y7 1883 aaKnown RBP6.88□□□□□ -1.31
BDNF-209ENST00000420794 SPAARA0A1B0GVQ0 90 aa6.88□□□□□ -1.31
BDNF-209ENST00000420794 TRAPPC13A5PLN9 417 aa6.88□□□□□ -1.31
BDNF-209ENST00000420794 BCKDKO14874 412 aa6.88□□□□□ -1.31
BDNF-209ENST00000420794 CYC1P08574 325 aa6.88□□□□□ -1.31
BDNF-209ENST00000420794 CAPGP40121 348 aa6.88□□□□□ -1.31
BDNF-209ENST00000420794 SLC6A8P48029 635 aa6.88□□□□□ -1.31
BDNF-209ENST00000420794 ZNF41P51814 821 aaPredicted RBP6.88□□□□□ -1.31
BDNF-209ENST00000420794 GABREP78334 506 aa6.88□□□□□ -1.31
BDNF-209ENST00000420794 MERTKQ12866 999 aa6.88□□□□□ -1.31
BDNF-209ENST00000420794 PDZK1Q5T2W1 519 aa6.88□□□□□ -1.31
BDNF-209ENST00000420794 OGFRL1Q5TC84 451 aaPredicted RBP6.88□□□□□ -1.31
BDNF-209ENST00000420794 ZNF574Q6ZN55 896 aaPredicted RBP6.88□□□□□ -1.31
BDNF-209ENST00000420794 RTL4Q6ZR62 310 aa6.88□□□□□ -1.31
BDNF-209ENST00000420794 MED25Q71SY5 747 aa6.88□□□□□ -1.31
BDNF-209ENST00000420794 TAPBPLQ9BX59 468 aa6.88□□□□□ -1.31
BDNF-209ENST00000420794 PNPLA3Q9NST1 481 aa6.88□□□□□ -1.31
BDNF-209ENST00000420794 PDP2Q9P2J9 529 aa6.88□□□□□ -1.31
BDNF-209ENST00000420794 NPIPA5A0A0B4J1W7 369 aa6.87□□□□□ -1.31
BDNF-209ENST00000420794 NPIPA7E9PJI5 369 aa6.87□□□□□ -1.31
BDNF-209ENST00000420794 H0YJX3 145 aa6.87□□□□□ -1.31
BDNF-209ENST00000420794 RASAL1O95294 804 aa6.87□□□□□ -1.31
BDNF-209ENST00000420794 HPRP00739 348 aa6.87□□□□□ -1.31
BDNF-209ENST00000420794 NPIPA8P0DM63 369 aa6.87□□□□□ -1.31
BDNF-209ENST00000420794 UBL4AP11441 157 aa6.87□□□□□ -1.31
BDNF-209ENST00000420794 CD59P13987 128 aa6.87□□□□□ -1.31
BDNF-209ENST00000420794 CCNA2P20248 432 aa6.87□□□□□ -1.31
BDNF-209ENST00000420794 PRKACGP22612 351 aa6.87□□□□□ -1.31
BDNF-209ENST00000420794 GPR143P51810 404 aa6.87□□□□□ -1.31
BDNF-209ENST00000420794 RRADP55042 308 aa6.87□□□□□ -1.31
BDNF-209ENST00000420794 RPS7P62081 194 aaKnown RBP6.87□□□□□ -1.31
BDNF-209ENST00000420794 ADRM1Q16186 407 aa6.87□□□□□ -1.31
BDNF-209ENST00000420794 C6orf52Q5T4I8 152 aa6.87□□□□□ -1.31
BDNF-209ENST00000420794 ALKBH2Q6NS38 261 aa6.87□□□□□ -1.31
BDNF-209ENST00000420794 FAM199XQ6PEV8 388 aaPredicted RBP6.87□□□□□ -1.31
BDNF-209ENST00000420794 AQP11Q8NBQ7 271 aa6.87□□□□□ -1.31
BDNF-209ENST00000420794 OR1N1Q8NGS0 311 aa6.87□□□□□ -1.31
BDNF-209ENST00000420794 DUS3LQ96G46 650 aaKnown RBP6.87□□□□□ -1.31
BDNF-209ENST00000420794 UCK2Q9BZX2 261 aa6.87□□□□□ -1.31
BDNF-209ENST00000420794 WDR54Q9H977 334 aa6.87□□□□□ -1.31
BDNF-209ENST00000420794 SPIN1Q9Y657 262 aaPredicted RBP6.87□□□□□ -1.31
BDNF-209ENST00000420794 ASXL3Q9C0F0 2248 aa6.87□□□□□ -1.31
BDNF-209ENST00000420794 RAD1O60671 282 aa6.87□□□□□ -1.31
BDNF-209ENST00000420794 KCNK2O95069 426 aa6.87□□□□□ -1.31
BDNF-209ENST00000420794 NKX2-2O95096 273 aa6.87□□□□□ -1.31
BDNF-209ENST00000420794 MFN2O95140 757 aa6.87□□□□□ -1.31
BDNF-209ENST00000420794 P04436 131 aa6.87□□□□□ -1.31
BDNF-209ENST00000420794 THBS1P07996 1170 aa6.87□□□□□ -1.31
BDNF-209ENST00000420794 FTH1P19P0C7X4 201 aa6.87□□□□□ -1.31
BDNF-209ENST00000420794 ACP2P11117 423 aa6.87□□□□□ -1.31
BDNF-209ENST00000420794 CFHR1Q03591 330 aa6.87□□□□□ -1.31
BDNF-209ENST00000420794 DNASE1L3Q13609 305 aa6.87□□□□□ -1.31
BDNF-209ENST00000420794 EXOC3L2Q2M3D2 409 aa6.87□□□□□ -1.31
BDNF-209ENST00000420794 CMIPQ8IY22 773 aa6.87□□□□□ -1.31
BDNF-209ENST00000420794 OR9Q1Q8NGQ5 310 aa6.87□□□□□ -1.31
BDNF-209ENST00000420794 C8orf44Q96CB5 159 aa6.87□□□□□ -1.31
BDNF-209ENST00000420794 PRRC1Q96M27 445 aa6.87□□□□□ -1.31
BDNF-209ENST00000420794 QRSL1Q9H0R6 528 aaKnown RBP6.87□□□□□ -1.31
BDNF-209ENST00000420794 EXO5Q9H790 373 aa6.87□□□□□ -1.31
BDNF-209ENST00000420794 CLN6Q9NWW5 311 aa6.87□□□□□ -1.31
BDNF-209ENST00000420794 WARS2Q9UGM6 360 aaKnown RBP6.87□□□□□ -1.31
BDNF-209ENST00000420794 RIMS3Q9UJD0 308 aa6.87□□□□□ -1.31
BDNF-209ENST00000420794 NTN3O00634 580 aaPredicted RBP6.87□□□□□ -1.31
BDNF-209ENST00000420794 SERPINI2O75830 405 aa6.87□□□□□ -1.31
BDNF-209ENST00000420794 CTSBP07858 339 aa6.87□□□□□ -1.31
BDNF-209ENST00000420794 CCDC159P0C7I6 412 aa6.87□□□□□ -1.31
BDNF-209ENST00000420794 PAICSP22234 425 aaKnown RBP6.87□□□□□ -1.31
BDNF-209ENST00000420794 LCN1P31025 176 aa6.87□□□□□ -1.31
BDNF-209ENST00000420794 CHN2P52757 468 aa6.87□□□□□ -1.31
BDNF-209ENST00000420794 PIN1Q13526 163 aaPredicted RBP6.87□□□□□ -1.31
BDNF-209ENST00000420794 NPTX1Q15818 432 aa6.87□□□□□ -1.31
BDNF-209ENST00000420794 PLA2G2CQ5R387 149 aa6.87□□□□□ -1.31
BDNF-209ENST00000420794 MRPL2Q5T653 305 aaKnown RBP6.87□□□□□ -1.31
BDNF-209ENST00000420794 THAP5Q7Z6K1 395 aa6.87□□□□□ -1.31
BDNF-209ENST00000420794 TMPRSS12Q86WS5 348 aa6.87□□□□□ -1.31
BDNF-209ENST00000420794 TMEM52Q8NDY8 209 aa6.87□□□□□ -1.31
BDNF-209ENST00000420794 OR2Y1Q8NGV0 311 aa6.87□□□□□ -1.31
BDNF-209ENST00000420794 DNAJA4Q8WW22 397 aaPredicted RBP6.87□□□□□ -1.31
BDNF-209ENST00000420794 LIN37Q96GY3 246 aaPredicted RBP6.87□□□□□ -1.31
BDNF-209ENST00000420794 DDA1Q9BW61 102 aa6.87□□□□□ -1.31
BDNF-209ENST00000420794 AICDAQ9GZX7 198 aa6.87□□□□□ -1.31
BDNF-209ENST00000420794 ATP13A2Q9NQ11 1180 aa6.87□□□□□ -1.31
BDNF-209ENST00000420794 MAGED1Q9Y5V3 778 aaPredicted RBP6.87□□□□□ -1.31
BDNF-209ENST00000420794 GPC6Q9Y625 555 aaPredicted RBP6.87□□□□□ -1.31
BDNF-209ENST00000420794 SPTBP11277 2137 aa6.87□□□□□ -1.31
BDNF-209ENST00000420794 GXYLT2A0PJZ3 443 aa6.87□□□□□ -1.31
BDNF-209ENST00000420794 FRG2CA6NGY1 282 aa6.87□□□□□ -1.31
BDNF-209ENST00000420794 SERINC4A6NH21 518 aa6.87□□□□□ -1.31
BDNF-209ENST00000420794 SAGE2PA6NJ88 616 aa6.87□□□□□ -1.31
BDNF-209ENST00000420794 EIF4E1BA6NMX2 242 aaKnown RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms