RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 CHDHQ8NE62 594 aaPredicted RBP11.38□□□□□ -0.59
SKA1-203ENST00000417656 OR4C3Q8NH37 302 aa11.38□□□□□ -0.59
SKA1-203ENST00000417656 PRR7Q8TB68 274 aa11.38□□□□□ -0.59
SKA1-203ENST00000417656 XAGE5Q8WWM1 108 aa11.38□□□□□ -0.59
SKA1-203ENST00000417656 SDF2Q99470 211 aa11.38□□□□□ -0.59
SKA1-203ENST00000417656 ELAC2Q9BQ52 826 aaKnown RBP11.38□□□□□ -0.59
SKA1-203ENST00000417656 NMUR2Q9GZQ4 415 aa11.38□□□□□ -0.59
SKA1-203ENST00000417656 TPT1P8Q9HAU6 139 aa11.38□□□□□ -0.59
SKA1-203ENST00000417656 EXD2Q9NVH0 621 aa11.38□□□□□ -0.59
SKA1-203ENST00000417656 SLC25A37Q9NYZ2 338 aa11.38□□□□□ -0.59
SKA1-203ENST00000417656 SLAMF8Q9P0V8 285 aa11.38□□□□□ -0.59
SKA1-203ENST00000417656 FBXL2Q9UKC9 423 aa11.38□□□□□ -0.59
SKA1-203ENST00000417656 PCDHB14Q9Y5E9 798 aa11.38□□□□□ -0.59
SKA1-203ENST00000417656 PCDHGB3Q9Y5G1 929 aa11.38□□□□□ -0.59
SKA1-203ENST00000417656 GCN1Q92616 2671 aaKnown RBP11.37□□□□□ -0.59
SKA1-203ENST00000417656 TRBV5-3A0A0A0MS03 114 aa11.37□□□□□ -0.59
SKA1-203ENST00000417656 CENPVL1A0A0U1RR11 272 aa11.37□□□□□ -0.59
SKA1-203ENST00000417656 PRAMEF27A3QJZ7 478 aa11.37□□□□□ -0.59
SKA1-203ENST00000417656 ALG1L2C9J202 215 aa11.37□□□□□ -0.59
SKA1-203ENST00000417656 ANGPT2O15123 496 aa11.37□□□□□ -0.59
SKA1-203ENST00000417656 SLC19A2O60779 497 aa11.37□□□□□ -0.59
SKA1-203ENST00000417656 TRAPPC6AO75865 159 aa11.37□□□□□ -0.59
SKA1-203ENST00000417656 SOX30O94993 753 aa11.37□□□□□ -0.59
SKA1-203ENST00000417656 ANGPTL1O95841 491 aa11.37□□□□□ -0.59
SKA1-203ENST00000417656 AGR2O95994 175 aa11.37□□□□□ -0.59
SKA1-203ENST00000417656 IGHG3P01860 377 aa11.37□□□□□ -0.59
SKA1-203ENST00000417656 NGFRP08138 427 aa11.37□□□□□ -0.59
SKA1-203ENST00000417656 ETFAP13804 333 aa11.37□□□□□ -0.59
SKA1-203ENST00000417656 ABOP16442 354 aa11.37□□□□□ -0.59
SKA1-203ENST00000417656 ENDOUP21128 410 aaKnown RBP11.37□□□□□ -0.59
SKA1-203ENST00000417656 TBXA2RP21731 343 aa11.37□□□□□ -0.59
SKA1-203ENST00000417656 LCN1P31025 176 aa11.37□□□□□ -0.59
SKA1-203ENST00000417656 CLK3P49761 638 aaKnown RBP11.37□□□□□ -0.59
SKA1-203ENST00000417656 ANXA11P50995 505 aaKnown RBP11.37□□□□□ -0.59
SKA1-203ENST00000417656 HPCAP84074 193 aa11.37□□□□□ -0.59
SKA1-203ENST00000417656 RBPJQ06330 500 aa11.37□□□□□ -0.59
SKA1-203ENST00000417656 KLF10Q13118 480 aa11.37□□□□□ -0.59
SKA1-203ENST00000417656 SLC10A1Q14973 349 aa11.37□□□□□ -0.59
SKA1-203ENST00000417656 TOMM20Q15388 145 aa11.37□□□□□ -0.59
SKA1-203ENST00000417656 CD226Q15762 336 aa11.37□□□□□ -0.59
SKA1-203ENST00000417656 ARHGAP11BQ3KRB8 267 aa11.37□□□□□ -0.59
SKA1-203ENST00000417656 FLYWCH1Q4VC44 716 aa11.37□□□□□ -0.59
SKA1-203ENST00000417656 LRIF1Q5T3J3 769 aa11.37□□□□□ -0.59
SKA1-203ENST00000417656 ATAD3BQ5T9A4 648 aa11.37□□□□□ -0.59
SKA1-203ENST00000417656 C1QL3Q5VWW1 255 aa11.37□□□□□ -0.59
SKA1-203ENST00000417656 DMRTA1Q5VZB9 504 aa11.37□□□□□ -0.59
SKA1-203ENST00000417656 DHDDSQ86SQ9 333 aa11.37□□□□□ -0.59
SKA1-203ENST00000417656 RETREG3Q86VR2 466 aa11.37□□□□□ -0.59
SKA1-203ENST00000417656 PLCZ1Q86YW0 608 aa11.37□□□□□ -0.59
SKA1-203ENST00000417656 ZNF614Q8N883 585 aa11.37□□□□□ -0.59
SKA1-203ENST00000417656 OR4K17Q8NGC6 315 aa11.37□□□□□ -0.59
SKA1-203ENST00000417656 ROPN1LQ96C74 230 aa11.37□□□□□ -0.59
SKA1-203ENST00000417656 ZNF350Q9GZX5 532 aa11.37□□□□□ -0.59
SKA1-203ENST00000417656 LDAHQ9H6V9 325 aa11.37□□□□□ -0.59
SKA1-203ENST00000417656 EXO5Q9H790 373 aa11.37□□□□□ -0.59
SKA1-203ENST00000417656 UBQLN4Q9NRR5 601 aa11.37□□□□□ -0.59
SKA1-203ENST00000417656 QPCTLQ9NXS2 382 aa11.37□□□□□ -0.59
SKA1-203ENST00000417656 VAPAQ9P0L0 249 aa11.37□□□□□ -0.59
SKA1-203ENST00000417656 ARMCX1Q9P291 453 aa11.37□□□□□ -0.59
SKA1-203ENST00000417656 SPRR3Q9UBC9 169 aa11.37□□□□□ -0.59
SKA1-203ENST00000417656 TNFRSF10DQ9UBN6 386 aa11.37□□□□□ -0.59
SKA1-203ENST00000417656 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.37□□□□□ -0.59
SKA1-203ENST00000417656 SH3BGRL2Q9UJC5 107 aa11.37□□□□□ -0.59
SKA1-203ENST00000417656 LEF1Q9UJU2 399 aaPredicted RBP11.37□□□□□ -0.59
SKA1-203ENST00000417656 DKKL1Q9UK85 242 aa11.37□□□□□ -0.59
SKA1-203ENST00000417656 CAPN7Q9Y6W3 813 aa11.37□□□□□ -0.59
SKA1-203ENST00000417656 ZNF407Q9C0G0 2248 aa11.37□□□□□ -0.59
SKA1-203ENST00000417656 ESPL1Q14674 2120 aa11.36□□□□□ -0.59
SKA1-203ENST00000417656 TENM4Q6N022 2769 aa11.36□□□□□ -0.59
SKA1-203ENST00000417656 FASNP49327 2511 aaKnown RBP11.36□□□□□ -0.59
SKA1-203ENST00000417656 HELZ2Q9BYK8 2649 aaKnown RBP11.36□□□□□ -0.59
SKA1-203ENST00000417656 TRGV5A0A0B4J1U4 118 aa11.36□□□□□ -0.59
SKA1-203ENST00000417656 GMNCA6NCL1 334 aa11.36□□□□□ -0.59
SKA1-203ENST00000417656 NPIPB9F8W1W9 429 aa11.36□□□□□ -0.59
SKA1-203ENST00000417656 SCDO00767 359 aa11.36□□□□□ -0.59
SKA1-203ENST00000417656 NDUFB5O43674 189 aa11.36□□□□□ -0.59
SKA1-203ENST00000417656 GMFGO60234 142 aa11.36□□□□□ -0.59
SKA1-203ENST00000417656 KIAA0513O60268 411 aa11.36□□□□□ -0.59
SKA1-203ENST00000417656 FCMRO60667 390 aa11.36□□□□□ -0.59
SKA1-203ENST00000417656 TNFRSF21O75509 655 aa11.36□□□□□ -0.59
SKA1-203ENST00000417656 STX11O75558 287 aa11.36□□□□□ -0.59
SKA1-203ENST00000417656 HPNP05981 417 aa11.36□□□□□ -0.59
SKA1-203ENST00000417656 SNRPB2P08579 225 aaKnown RBP11.36□□□□□ -0.59
SKA1-203ENST00000417656 HPGDP15428 266 aa11.36□□□□□ -0.59
SKA1-203ENST00000417656 TCEA1P23193 301 aaKnown RBP11.36□□□□□ -0.59
SKA1-203ENST00000417656 CRATP43155 626 aa11.36□□□□□ -0.59
SKA1-203ENST00000417656 DSTNP60981 165 aa11.36□□□□□ -0.59
SKA1-203ENST00000417656 TXNL4AP83876 142 aaKnown RBP11.36□□□□□ -0.59
SKA1-203ENST00000417656 KCNC4Q03721 635 aa11.36□□□□□ -0.59
SKA1-203ENST00000417656 GPR68Q15743 365 aa11.36□□□□□ -0.59
SKA1-203ENST00000417656 SYPL1Q16563 259 aa11.36□□□□□ -0.59
SKA1-203ENST00000417656 C3AR1Q16581 482 aa11.36□□□□□ -0.59
SKA1-203ENST00000417656 GPAT3Q53EU6 434 aa11.36□□□□□ -0.59
SKA1-203ENST00000417656 EIPR1Q53HC9 387 aa11.36□□□□□ -0.59
SKA1-203ENST00000417656 WIPI1Q5MNZ9 446 aaPredicted RBP11.36□□□□□ -0.59
SKA1-203ENST00000417656 TYW3Q6IPR3 259 aaKnown RBP11.36□□□□□ -0.59
SKA1-203ENST00000417656 ARHGAP11AQ6P4F7 1023 aa11.36□□□□□ -0.59
SKA1-203ENST00000417656 FRRS1Q6ZNA5 592 aa11.36□□□□□ -0.59
SKA1-203ENST00000417656 HMGN2P46Q86SG4 172 aa11.36□□□□□ -0.59
SKA1-203ENST00000417656 YRDCQ86U90 279 aaKnown RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms