RNA–Protein interactions for RNA: ENST00000417413.7

RAB3IP-205, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-205ENST00000417413 IFNA16P05015 189 aa17.82■□□□□ 0.44
RAB3IP-205ENST00000417413 IGFBP1P08833 259 aaPredicted RBP17.82■□□□□ 0.44
RAB3IP-205ENST00000417413 PCMT1P22061 227 aa17.82■□□□□ 0.44
RAB3IP-205ENST00000417413 TTKP33981 857 aa17.82■□□□□ 0.44
RAB3IP-205ENST00000417413 IDH2P48735 452 aaKnown RBP17.82■□□□□ 0.44
RAB3IP-205ENST00000417413 PGDP52209 483 aa17.82■□□□□ 0.44
RAB3IP-205ENST00000417413 CSNK2BP67870 215 aa17.82■□□□□ 0.44
RAB3IP-205ENST00000417413 ALDH6A1Q02252 535 aaKnown RBP17.82■□□□□ 0.44
RAB3IP-205ENST00000417413 PLAURQ03405 335 aa17.82■□□□□ 0.44
RAB3IP-205ENST00000417413 COX10Q12887 443 aa17.82■□□□□ 0.44
RAB3IP-205ENST00000417413 LPAL2Q16609 132 aa17.82■□□□□ 0.44
RAB3IP-205ENST00000417413 MRPL2Q5T653 305 aaKnown RBP17.82■□□□□ 0.44
RAB3IP-205ENST00000417413 QSOX2Q6ZRP7 698 aa17.82■□□□□ 0.44
RAB3IP-205ENST00000417413 PLEKHM3Q6ZWE6 761 aa17.82■□□□□ 0.44
RAB3IP-205ENST00000417413 EID2Q8N6I1 236 aa17.82■□□□□ 0.44
RAB3IP-205ENST00000417413 OR2I1PQ8NGU4 316 aa17.82■□□□□ 0.44
RAB3IP-205ENST00000417413 C16orf52Q8NHV5 167 aa17.82■□□□□ 0.44
RAB3IP-205ENST00000417413 PTPMT1Q8WUK0 201 aaPredicted RBP17.82■□□□□ 0.44
RAB3IP-205ENST00000417413 GPA33Q99795 319 aa17.82■□□□□ 0.44
RAB3IP-205ENST00000417413 RHNO1Q9BSD3 238 aa17.82■□□□□ 0.44
RAB3IP-205ENST00000417413 POLR2J3Q9H1A7 115 aaKnown RBP17.82■□□□□ 0.44
RAB3IP-205ENST00000417413 PLCXD1Q9NUJ7 323 aa17.82■□□□□ 0.44
RAB3IP-205ENST00000417413 PCDHGB1Q9Y5G3 927 aa17.82■□□□□ 0.44
RAB3IP-205ENST00000417413 A0A1B0GX78 115 aa17.81■□□□□ 0.44
RAB3IP-205ENST00000417413 RPLP0P05388 317 aaKnown RBP17.81■□□□□ 0.44
RAB3IP-205ENST00000417413 ATXN8OSP0DMR3 200 aa17.81■□□□□ 0.44
RAB3IP-205ENST00000417413 CT45A8P0DMV1 189 aa17.81■□□□□ 0.44
RAB3IP-205ENST00000417413 CT45A9P0DMV2 189 aa17.81■□□□□ 0.44
RAB3IP-205ENST00000417413 FBLP22087 321 aaKnown RBP17.81■□□□□ 0.44
RAB3IP-205ENST00000417413 EFNA3P52797 238 aa17.81■□□□□ 0.44
RAB3IP-205ENST00000417413 CT45A2Q5DJT8 189 aa17.81■□□□□ 0.44
RAB3IP-205ENST00000417413 GTF2IRD2BQ6EKJ0 949 aa17.81■□□□□ 0.44
RAB3IP-205ENST00000417413 GDF7Q7Z4P5 450 aa17.81■□□□□ 0.44
RAB3IP-205ENST00000417413 GTF2IRD2Q86UP8 949 aa17.81■□□□□ 0.44
RAB3IP-205ENST00000417413 RCBTB1Q8NDN9 531 aa17.81■□□□□ 0.44
RAB3IP-205ENST00000417413 OR13F1Q8NGS4 319 aa17.81■□□□□ 0.44
RAB3IP-205ENST00000417413 SIGLEC11Q96RL6 698 aa17.81■□□□□ 0.44
RAB3IP-205ENST00000417413 VCX3AQ9NNX9 186 aa17.81■□□□□ 0.44
RAB3IP-205ENST00000417413 RSL24D1Q9UHA3 163 aaKnown RBP17.81■□□□□ 0.44
RAB3IP-205ENST00000417413 SNX5Q9Y5X3 404 aa17.81■□□□□ 0.44
RAB3IP-205ENST00000417413 COMMD3-BMI1R4GMX3 469 aa17.81■□□□□ 0.44
RAB3IP-205ENST00000417413 MUC3AQ02505 3323 aa17.81■□□□□ 0.44
RAB3IP-205ENST00000417413 C17orf105B2RV13 164 aa17.8■□□□□ 0.44
RAB3IP-205ENST00000417413 MRPS14O60783 128 aaKnown RBP17.8■□□□□ 0.44
RAB3IP-205ENST00000417413 BCAS1O75363 584 aaPredicted RBP17.8■□□□□ 0.44
RAB3IP-205ENST00000417413 SEC14L2O76054 403 aa17.8■□□□□ 0.44
RAB3IP-205ENST00000417413 SOX14O95416 240 aa17.8■□□□□ 0.44
RAB3IP-205ENST00000417413 NTN1O95631 604 aa17.8■□□□□ 0.44
RAB3IP-205ENST00000417413 PRG2P13727 222 aa17.8■□□□□ 0.44
RAB3IP-205ENST00000417413 TNNI3P19429 210 aa17.8■□□□□ 0.44
RAB3IP-205ENST00000417413 RHAGQ02094 409 aa17.8■□□□□ 0.44
RAB3IP-205ENST00000417413 DECR1Q16698 335 aa17.8■□□□□ 0.44
RAB3IP-205ENST00000417413 FLYWCH1Q4VC44 716 aa17.8■□□□□ 0.44
RAB3IP-205ENST00000417413 SLX4IPQ5VYV7 408 aa17.8■□□□□ 0.44
RAB3IP-205ENST00000417413 PRICKLE2Q7Z3G6 844 aa17.8■□□□□ 0.44
RAB3IP-205ENST00000417413 NKAIN4Q8IVV8 208 aa17.8■□□□□ 0.44
RAB3IP-205ENST00000417413 OR7G1Q8NGA0 311 aa17.8■□□□□ 0.44
RAB3IP-205ENST00000417413 OR4D9Q8NGE8 314 aa17.8■□□□□ 0.44
RAB3IP-205ENST00000417413 TSLPQ969D9 159 aa17.8■□□□□ 0.44
RAB3IP-205ENST00000417413 SLC41A3Q96GZ6 507 aa17.8■□□□□ 0.44
RAB3IP-205ENST00000417413 DPYSL5Q9BPU6 564 aa17.8■□□□□ 0.44
RAB3IP-205ENST00000417413 GTPBP2Q9BX10 602 aaKnown RBP17.8■□□□□ 0.44
RAB3IP-205ENST00000417413 ARRDC1-AS1Q9H2J1 176 aa17.8■□□□□ 0.44
RAB3IP-205ENST00000417413 LRRN3Q9H3W5 708 aa17.8■□□□□ 0.44
RAB3IP-205ENST00000417413 C11orf16Q9NQ32 467 aa17.8■□□□□ 0.44
RAB3IP-205ENST00000417413 PCDHGA10Q9Y5H3 936 aa17.8■□□□□ 0.44
RAB3IP-205ENST00000417413 TTC36A6NLP5 189 aa17.8■□□□□ 0.44
RAB3IP-205ENST00000417413 M0R129 80 aa17.8■□□□□ 0.44
RAB3IP-205ENST00000417413 ITIH1P19827 911 aa17.8■□□□□ 0.44
RAB3IP-205ENST00000417413 DRD5P21918 477 aa17.8■□□□□ 0.44
RAB3IP-205ENST00000417413 POU1F1P28069 291 aa17.8■□□□□ 0.44
RAB3IP-205ENST00000417413 HTR2AP28223 471 aa17.8■□□□□ 0.44
RAB3IP-205ENST00000417413 IFNA8P32881 189 aa17.8■□□□□ 0.44
RAB3IP-205ENST00000417413 CDC42P60953 191 aa17.8■□□□□ 0.44
RAB3IP-205ENST00000417413 C1orf189Q5VU69 101 aa17.8■□□□□ 0.44
RAB3IP-205ENST00000417413 C12orf73Q69YU5 71 aa17.8■□□□□ 0.44
RAB3IP-205ENST00000417413 CLVS1Q8IUQ0 354 aaPredicted RBP17.8■□□□□ 0.44
RAB3IP-205ENST00000417413 TMEM151BQ8IW70 566 aa17.8■□□□□ 0.44
RAB3IP-205ENST00000417413 ZSCAN1Q8NBB4 408 aa17.8■□□□□ 0.44
RAB3IP-205ENST00000417413 ZNF540Q8NDQ6 660 aa17.8■□□□□ 0.44
RAB3IP-205ENST00000417413 GNPDA2Q8TDQ7 276 aa17.8■□□□□ 0.44
RAB3IP-205ENST00000417413 IPCEF1Q8WWN9 437 aaPredicted RBP17.8■□□□□ 0.44
RAB3IP-205ENST00000417413 ACOT11Q8WXI4 607 aaPredicted RBP17.8■□□□□ 0.44
RAB3IP-205ENST00000417413 NAT6Q93015 286 aa17.8■□□□□ 0.44
RAB3IP-205ENST00000417413 MUL1Q969V5 352 aa17.8■□□□□ 0.44
RAB3IP-205ENST00000417413 ITPAQ9BY32 194 aa17.8■□□□□ 0.44
RAB3IP-205ENST00000417413 POLR2J2Q9GZM3 115 aaKnown RBP17.8■□□□□ 0.44
RAB3IP-205ENST00000417413 LHPPQ9H008 270 aa17.8■□□□□ 0.44
RAB3IP-205ENST00000417413 Q9N2J8 555 aa17.8■□□□□ 0.44
RAB3IP-205ENST00000417413 CCNB1IP1Q9NPC3 277 aa17.8■□□□□ 0.44
RAB3IP-205ENST00000417413 PNO1Q9NRX1 252 aaKnown RBP17.8■□□□□ 0.44
RAB3IP-205ENST00000417413 IMPAD1Q9NX62 359 aa17.8■□□□□ 0.44
RAB3IP-205ENST00000417413 PSORS1C1Q9UIG5 152 aa17.8■□□□□ 0.44
RAB3IP-205ENST00000417413 R4GN57 208 aa17.8■□□□□ 0.44
RAB3IP-205ENST00000417413 IGHV5-10-1A0A0J9YXX1 117 aa17.79■□□□□ 0.44
RAB3IP-205ENST00000417413 NPIPB9F8W1W9 429 aa17.79■□□□□ 0.44
RAB3IP-205ENST00000417413 LYPD3O95274 346 aa17.79■□□□□ 0.44
RAB3IP-205ENST00000417413 GKN3PP0CG01 181 aa17.79■□□□□ 0.44
RAB3IP-205ENST00000417413 ZNF883P0CG24 379 aa17.79■□□□□ 0.44
RAB3IP-205ENST00000417413 SLC5A2P31639 672 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms