RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 FGF3P11487 239 aaPredicted RBP3.92□□□□□ -1.78
BRCA1-204ENST00000412061 HOXA1P49639 335 aaPredicted RBP3.92□□□□□ -1.78
BRCA1-204ENST00000412061 SLC7A2P52569 658 aa3.92□□□□□ -1.78
BRCA1-204ENST00000412061 NDST2P52849 883 aa3.92□□□□□ -1.78
BRCA1-204ENST00000412061 HERV-K104P61576 105 aa3.92□□□□□ -1.78
BRCA1-204ENST00000412061 POU3F1Q03052 451 aaPredicted RBP3.92□□□□□ -1.78
BRCA1-204ENST00000412061 GK3PQ14409 553 aa3.92□□□□□ -1.78
BRCA1-204ENST00000412061 ZNF585BQ52M93 769 aa3.92□□□□□ -1.78
BRCA1-204ENST00000412061 LEG1Q6P5S2 330 aa3.92□□□□□ -1.78
BRCA1-204ENST00000412061 SPSB3Q6PJ21 355 aa3.92□□□□□ -1.78
BRCA1-204ENST00000412061 TMEM207Q6UWW9 146 aa3.92□□□□□ -1.78
BRCA1-204ENST00000412061 ZNF852Q6ZMS4 543 aa3.92□□□□□ -1.78
BRCA1-204ENST00000412061 Q6ZVQ6 151 aa3.92□□□□□ -1.78
BRCA1-204ENST00000412061 GPR142Q7Z601 462 aa3.92□□□□□ -1.78
BRCA1-204ENST00000412061 ANKRD37Q7Z713 158 aa3.92□□□□□ -1.78
BRCA1-204ENST00000412061 VTCN1Q7Z7D3 282 aa3.92□□□□□ -1.78
BRCA1-204ENST00000412061 SERPINA9Q86WD7 417 aa3.92□□□□□ -1.78
BRCA1-204ENST00000412061 MICU2Q8IYU8 434 aa3.92□□□□□ -1.78
BRCA1-204ENST00000412061 SDR9C7Q8NEX9 313 aa3.92□□□□□ -1.78
BRCA1-204ENST00000412061 OR2L3Q8NG85 312 aa3.92□□□□□ -1.78
BRCA1-204ENST00000412061 OR4K14Q8NGD5 310 aa3.92□□□□□ -1.78
BRCA1-204ENST00000412061 GPX8Q8TED1 209 aa3.92□□□□□ -1.78
BRCA1-204ENST00000412061 MITD1Q8WV92 249 aa3.92□□□□□ -1.78
BRCA1-204ENST00000412061 PIBF1Q8WXW3 757 aa3.92□□□□□ -1.78
BRCA1-204ENST00000412061 ART4Q93070 314 aa3.92□□□□□ -1.78
BRCA1-204ENST00000412061 SLC38A4Q969I6 547 aa3.92□□□□□ -1.78
BRCA1-204ENST00000412061 NAF1Q96HR8 494 aaKnown RBP3.92□□□□□ -1.78
BRCA1-204ENST00000412061 PAIP2Q9BPZ3 127 aaKnown RBP3.92□□□□□ -1.78
BRCA1-204ENST00000412061 RHNO1Q9BSD3 238 aa3.92□□□□□ -1.78
BRCA1-204ENST00000412061 FUCA2Q9BTY2 467 aa3.92□□□□□ -1.78
BRCA1-204ENST00000412061 SPATA16Q9BXB7 569 aa3.92□□□□□ -1.78
BRCA1-204ENST00000412061 SLC25A51Q9H1U9 297 aa3.92□□□□□ -1.78
BRCA1-204ENST00000412061 NARFLQ9H6Q4 476 aa3.92□□□□□ -1.78
BRCA1-204ENST00000412061 NRN1Q9NPD7 142 aa3.92□□□□□ -1.78
BRCA1-204ENST00000412061 SLC17A5Q9NRA2 495 aa3.92□□□□□ -1.78
BRCA1-204ENST00000412061 AHSPQ9NZD4 102 aa3.92□□□□□ -1.78
BRCA1-204ENST00000412061 TUBGCP4Q9UGJ1 667 aa3.92□□□□□ -1.78
BRCA1-204ENST00000412061 POLDIP2Q9Y2S7 368 aa3.92□□□□□ -1.78
BRCA1-204ENST00000412061 RHBDD3Q9Y3P4 386 aa3.92□□□□□ -1.78
BRCA1-204ENST00000412061 TIMM10BQ9Y5J6 103 aa3.92□□□□□ -1.78
BRCA1-204ENST00000412061 V9GYY5 206 aaPredicted RBP3.92□□□□□ -1.78
BRCA1-204ENST00000412061 SYNJ2O15056 1496 aa3.91□□□□□ -1.78
BRCA1-204ENST00000412061 LOC390937A0A1W2PQ73 354 aa3.91□□□□□ -1.78
BRCA1-204ENST00000412061 LRP5LA4QPB2 252 aa3.91□□□□□ -1.78
BRCA1-204ENST00000412061 GLTPD2A6NH11 291 aa3.91□□□□□ -1.78
BRCA1-204ENST00000412061 FBLL1A6NHQ2 334 aaKnown RBP3.91□□□□□ -1.78
BRCA1-204ENST00000412061 C16orf97H3BN30 126 aa3.91□□□□□ -1.78
BRCA1-204ENST00000412061 HAS3O00219 553 aa3.91□□□□□ -1.78
BRCA1-204ENST00000412061 SIGLEC5O15389 551 aa3.91□□□□□ -1.78
BRCA1-204ENST00000412061 STX11O75558 287 aa3.91□□□□□ -1.78
BRCA1-204ENST00000412061 CLPXO76031 633 aa3.91□□□□□ -1.78
BRCA1-204ENST00000412061 TOXO94900 526 aa3.91□□□□□ -1.78
BRCA1-204ENST00000412061 LRATO95237 230 aa3.91□□□□□ -1.78
BRCA1-204ENST00000412061 UMODP07911 640 aa3.91□□□□□ -1.78
BRCA1-204ENST00000412061 PRKAR1AP10644 381 aa3.91□□□□□ -1.78
BRCA1-204ENST00000412061 MCF2P10911 925 aa3.91□□□□□ -1.78
BRCA1-204ENST00000412061 ATP1B2P14415 290 aaPredicted RBP3.91□□□□□ -1.78
BRCA1-204ENST00000412061 ACADSP16219 412 aa3.91□□□□□ -1.78
BRCA1-204ENST00000412061 AADACP22760 399 aa3.91□□□□□ -1.78
BRCA1-204ENST00000412061 MMP11P24347 488 aa3.91□□□□□ -1.78
BRCA1-204ENST00000412061 P2RY1P47900 373 aa3.91□□□□□ -1.78
BRCA1-204ENST00000412061 DVL1P1P54792 670 aaPredicted RBP3.91□□□□□ -1.78
BRCA1-204ENST00000412061 OGDHQ02218 1023 aa3.91□□□□□ -1.78
BRCA1-204ENST00000412061 C1orf61Q13536 156 aa3.91□□□□□ -1.78
BRCA1-204ENST00000412061 ATXN7L3Q14CW9 347 aaPredicted RBP3.91□□□□□ -1.78
BRCA1-204ENST00000412061 HNRNPA1L2Q32P51 320 aaKnown RBP3.91□□□□□ -1.78
BRCA1-204ENST00000412061 FAM106AQ4KMX7 169 aa3.91□□□□□ -1.78
BRCA1-204ENST00000412061 SBK1Q52WX2 424 aa3.91□□□□□ -1.78
BRCA1-204ENST00000412061 SPANXN4Q5MJ08 99 aa3.91□□□□□ -1.78
BRCA1-204ENST00000412061 ATP1A1-AS1Q5TC04 95 aa3.91□□□□□ -1.78
BRCA1-204ENST00000412061 BTNL3Q6UXE8 466 aa3.91□□□□□ -1.78
BRCA1-204ENST00000412061 SSX9Q7RTT3 188 aa3.91□□□□□ -1.78
BRCA1-204ENST00000412061 H2BFWTQ7Z2G1 175 aa3.91□□□□□ -1.78
BRCA1-204ENST00000412061 COMTD1Q86VU5 262 aa3.91□□□□□ -1.78
BRCA1-204ENST00000412061 SPATA24Q86W54 205 aa3.91□□□□□ -1.78
BRCA1-204ENST00000412061 SYCE1Q8N0S2 351 aa3.91□□□□□ -1.78
BRCA1-204ENST00000412061 FGFRL1Q8N441 504 aa3.91□□□□□ -1.78
BRCA1-204ENST00000412061 ZNF843Q8N446 348 aa3.91□□□□□ -1.78
BRCA1-204ENST00000412061 OR4F17Q8NGA8 305 aa3.91□□□□□ -1.78
BRCA1-204ENST00000412061 OR4F5Q8NH21 305 aa3.91□□□□□ -1.78
BRCA1-204ENST00000412061 LMO3Q8TAP4 145 aa3.91□□□□□ -1.78
BRCA1-204ENST00000412061 CNIH3Q8TBE1 160 aa3.91□□□□□ -1.78
BRCA1-204ENST00000412061 OR1E3Q8WZA6 343 aa3.91□□□□□ -1.78
BRCA1-204ENST00000412061 SCRN2Q96FV2 425 aa3.91□□□□□ -1.78
BRCA1-204ENST00000412061 PPP1R16AQ96I34 528 aa3.91□□□□□ -1.78
BRCA1-204ENST00000412061 LURAP1Q96LR2 239 aa3.91□□□□□ -1.78
BRCA1-204ENST00000412061 MTMR9Q96QG7 549 aa3.91□□□□□ -1.78
BRCA1-204ENST00000412061 OR4F4Q96R69 305 aa3.91□□□□□ -1.78
BRCA1-204ENST00000412061 TGS1Q96RS0 853 aaKnown RBP3.91□□□□□ -1.78
BRCA1-204ENST00000412061 DPH7Q9BTV6 452 aa3.91□□□□□ -1.78
BRCA1-204ENST00000412061 TEKT3Q9BXF9 490 aa3.91□□□□□ -1.78
BRCA1-204ENST00000412061 FBXO44Q9H4M3 255 aa3.91□□□□□ -1.78
BRCA1-204ENST00000412061 ZBTB20Q9HC78 741 aaPredicted RBP3.91□□□□□ -1.78
BRCA1-204ENST00000412061 DUS2Q9NX74 493 aaKnown RBP3.91□□□□□ -1.78
BRCA1-204ENST00000412061 UBAP1Q9NZ09 502 aa3.91□□□□□ -1.78
BRCA1-204ENST00000412061 PSMC3IPQ9P2W1 217 aaPredicted RBP3.91□□□□□ -1.78
BRCA1-204ENST00000412061 MBD2Q9UBB5 411 aa3.91□□□□□ -1.78
BRCA1-204ENST00000412061 ANAPC7Q9UJX3 599 aa3.91□□□□□ -1.78
BRCA1-204ENST00000412061 ANGPTL2Q9UKU9 493 aa3.91□□□□□ -1.78
BRCA1-204ENST00000412061 PRPF19Q9UMS4 504 aaKnown RBP3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms