RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 CYB561P49447 251 aa15.18■□□□□ 0.02
TSPAN4-208ENST00000409531 HLCSP50747 726 aa15.18■□□□□ 0.02
TSPAN4-208ENST00000409531 CEACAM7Q14002 265 aa15.18■□□□□ 0.02
TSPAN4-208ENST00000409531 NTRK2Q16620 822 aa15.18■□□□□ 0.02
TSPAN4-208ENST00000409531 FLYWCH1Q4VC44 716 aa15.18■□□□□ 0.02
TSPAN4-208ENST00000409531 CCNJQ5T5M9 372 aa15.18■□□□□ 0.02
TSPAN4-208ENST00000409531 LINC00696Q6ZRV3 163 aa15.18■□□□□ 0.02
TSPAN4-208ENST00000409531 Q6ZS92 163 aa15.18■□□□□ 0.02
TSPAN4-208ENST00000409531 NUP54Q7Z3B4 507 aa15.18■□□□□ 0.02
TSPAN4-208ENST00000409531 KRT73Q86Y46 540 aa15.18■□□□□ 0.02
TSPAN4-208ENST00000409531 BEST3Q8N1M1 668 aa15.18■□□□□ 0.02
TSPAN4-208ENST00000409531 FBXW8Q8N3Y1 598 aa15.18■□□□□ 0.02
TSPAN4-208ENST00000409531 RNF148Q8N7C7 305 aa15.18■□□□□ 0.02
TSPAN4-208ENST00000409531 OIT3Q8WWZ8 545 aa15.18■□□□□ 0.02
TSPAN4-208ENST00000409531 EFHD2Q96C19 240 aaPredicted RBP15.18■□□□□ 0.02
TSPAN4-208ENST00000409531 TMCO6Q96DC7 493 aa15.18■□□□□ 0.02
TSPAN4-208ENST00000409531 SGCZQ96LD1 299 aa15.18■□□□□ 0.02
TSPAN4-208ENST00000409531 ZNF607Q96SK3 696 aa15.18■□□□□ 0.02
TSPAN4-208ENST00000409531 ADOQ96SZ5 270 aa15.18■□□□□ 0.02
TSPAN4-208ENST00000409531 TREX2Q9BQ50 279 aaPredicted RBP15.18■□□□□ 0.02
TSPAN4-208ENST00000409531 UTP23Q9BRU9 249 aaKnown RBP15.18■□□□□ 0.02
TSPAN4-208ENST00000409531 CADM1Q9BY67 442 aaKnown RBP15.18■□□□□ 0.02
TSPAN4-208ENST00000409531 RNF32Q9H0A6 362 aa15.18■□□□□ 0.02
TSPAN4-208ENST00000409531 SAP130Q9H0E3 1048 aa15.18■□□□□ 0.02
TSPAN4-208ENST00000409531 MUC13Q9H3R2 512 aa15.18■□□□□ 0.02
TSPAN4-208ENST00000409531 MTHFD2LQ9H903 347 aaPredicted RBP15.18■□□□□ 0.02
TSPAN4-208ENST00000409531 BCL2L10Q9HD36 194 aa15.18■□□□□ 0.02
TSPAN4-208ENST00000409531 PCDHGA10Q9Y5H3 936 aa15.18■□□□□ 0.02
TSPAN4-208ENST00000409531 PRAMEF27A3QJZ7 478 aa15.17■□□□□ 0.02
TSPAN4-208ENST00000409531 MAN1A2O60476 641 aa15.17■□□□□ 0.02
TSPAN4-208ENST00000409531 ZNF354AO60765 605 aaPredicted RBP15.17■□□□□ 0.02
TSPAN4-208ENST00000409531 SORBS2O94875 1100 aaKnown RBP15.17■□□□□ 0.02
TSPAN4-208ENST00000409531 OR6B1O95007 311 aa15.17■□□□□ 0.02
TSPAN4-208ENST00000409531 PGM3O95394 542 aa15.17■□□□□ 0.02
TSPAN4-208ENST00000409531 IGKV1D-16P01601 117 aa15.17■□□□□ 0.02
TSPAN4-208ENST00000409531 CHRM4P08173 479 aa15.17■□□□□ 0.02
TSPAN4-208ENST00000409531 ETS2P15036 469 aa15.17■□□□□ 0.02
TSPAN4-208ENST00000409531 TCN1P20061 433 aaPredicted RBP15.17■□□□□ 0.02
TSPAN4-208ENST00000409531 MLLT10P55197 1068 aa15.17■□□□□ 0.02
TSPAN4-208ENST00000409531 ZNF791Q3KP31 576 aaPredicted RBP15.17■□□□□ 0.02
TSPAN4-208ENST00000409531 LYPD8Q6UX82 237 aa15.17■□□□□ 0.02
TSPAN4-208ENST00000409531 IL20RBQ6UXL0 311 aa15.17■□□□□ 0.02
TSPAN4-208ENST00000409531 FRRS1Q6ZNA5 592 aa15.17■□□□□ 0.02
TSPAN4-208ENST00000409531 PATL1Q86TB9 770 aaKnown RBP15.17■□□□□ 0.02
TSPAN4-208ENST00000409531 ZNF619Q8N2I2 560 aa15.17■□□□□ 0.02
TSPAN4-208ENST00000409531 Q8NA96 180 aa15.17■□□□□ 0.02
TSPAN4-208ENST00000409531 ZNF527Q8NB42 609 aa15.17■□□□□ 0.02
TSPAN4-208ENST00000409531 HAS2Q92819 552 aa15.17■□□□□ 0.02
TSPAN4-208ENST00000409531 SECISBP2Q96T21 854 aaKnown RBP15.17■□□□□ 0.02
TSPAN4-208ENST00000409531 SPATA5L1Q9BVQ7 753 aa15.17■□□□□ 0.02
TSPAN4-208ENST00000409531 SLC38A1Q9H2H9 487 aa15.17■□□□□ 0.02
TSPAN4-208ENST00000409531 TRIM45Q9H8W5 580 aaPredicted RBP15.17■□□□□ 0.02
TSPAN4-208ENST00000409531 MAGEL2Q9UJ55 1249 aa15.17■□□□□ 0.02
TSPAN4-208ENST00000409531 NINQ8N4C6 2090 aa15.17■□□□□ 0.02
TSPAN4-208ENST00000409531 KIAA0513O60268 411 aa15.17■□□□□ 0.02
TSPAN4-208ENST00000409531 UGT2B11O75310 529 aa15.17■□□□□ 0.02
TSPAN4-208ENST00000409531 SERPINB7O75635 380 aa15.17■□□□□ 0.02
TSPAN4-208ENST00000409531 STAMBPO95630 424 aa15.17■□□□□ 0.02
TSPAN4-208ENST00000409531 IFNA14P01570 189 aa15.17■□□□□ 0.02
TSPAN4-208ENST00000409531 NGFRP08138 427 aa15.17■□□□□ 0.02
TSPAN4-208ENST00000409531 HPGDP15428 266 aa15.17■□□□□ 0.02
TSPAN4-208ENST00000409531 CLK3P49761 638 aaKnown RBP15.17■□□□□ 0.02
TSPAN4-208ENST00000409531 ATP12AP54707 1039 aa15.17■□□□□ 0.02
TSPAN4-208ENST00000409531 OC90Q02509 493 aaPredicted RBP15.17■□□□□ 0.02
TSPAN4-208ENST00000409531 GPR68Q15743 365 aa15.17■□□□□ 0.02
TSPAN4-208ENST00000409531 MAPK11Q15759 364 aa15.17■□□□□ 0.02
TSPAN4-208ENST00000409531 TYW3Q6IPR3 259 aaKnown RBP15.17■□□□□ 0.02
TSPAN4-208ENST00000409531 RTL4Q6ZR62 310 aa15.17■□□□□ 0.02
TSPAN4-208ENST00000409531 GALNT10Q86SR1 603 aa15.17■□□□□ 0.02
TSPAN4-208ENST00000409531 PEX5LQ8IYB4 626 aa15.17■□□□□ 0.02
TSPAN4-208ENST00000409531 ULK2Q8IYT8 1036 aa15.17■□□□□ 0.02
TSPAN4-208ENST00000409531 CYP4Z2PQ8N1L4 340 aa15.17■□□□□ 0.02
TSPAN4-208ENST00000409531 GOLM1Q8NBJ4 401 aa15.17■□□□□ 0.02
TSPAN4-208ENST00000409531 FAM13CQ8NE31 585 aa15.17■□□□□ 0.02
TSPAN4-208ENST00000409531 SPPL2AQ8TCT8 520 aa15.17■□□□□ 0.02
TSPAN4-208ENST00000409531 RUBCNLQ9H714 662 aa15.17■□□□□ 0.02
TSPAN4-208ENST00000409531 UBQLN4Q9NRR5 601 aa15.17■□□□□ 0.02
TSPAN4-208ENST00000409531 FBXO34Q9NWN3 711 aa15.17■□□□□ 0.02
TSPAN4-208ENST00000409531 LUZP4Q9P127 313 aa15.17■□□□□ 0.02
TSPAN4-208ENST00000409531 SUCOQ9UBS9 1254 aaKnown RBP15.17■□□□□ 0.02
TSPAN4-208ENST00000409531 PACSIN3Q9UKS6 424 aa15.17■□□□□ 0.02
TSPAN4-208ENST00000409531 MKLN1Q9UL63 735 aa15.17■□□□□ 0.02
TSPAN4-208ENST00000409531 ABCG2Q9UNQ0 655 aa15.17■□□□□ 0.02
TSPAN4-208ENST00000409531 EML6Q6ZMW3 1958 aa15.16■□□□□ 0.02
TSPAN4-208ENST00000409531 DSPPQ9NZW4 1301 aa15.16■□□□□ 0.02
TSPAN4-208ENST00000409531 NBASA2RRP1 2371 aa15.16■□□□□ 0.02
TSPAN4-208ENST00000409531 ERICH4A6NGS2 130 aa15.16■□□□□ 0.02
TSPAN4-208ENST00000409531 CXCR6O00574 342 aa15.16■□□□□ 0.02
TSPAN4-208ENST00000409531 FCMRO60667 390 aa15.16■□□□□ 0.02
TSPAN4-208ENST00000409531 PDE5AO76074 875 aa15.16■□□□□ 0.02
TSPAN4-208ENST00000409531 UTS2O95399 124 aa15.16■□□□□ 0.02
TSPAN4-208ENST00000409531 WDPCPO95876 746 aa15.16■□□□□ 0.02
TSPAN4-208ENST00000409531 CYP4B1P13584 511 aa15.16■□□□□ 0.02
TSPAN4-208ENST00000409531 GGT1P19440 569 aa15.16■□□□□ 0.02
TSPAN4-208ENST00000409531 TBXA2RP21731 343 aa15.16■□□□□ 0.02
TSPAN4-208ENST00000409531 DCTP40126 519 aa15.16■□□□□ 0.02
TSPAN4-208ENST00000409531 PCBP3P57721 371 aaKnown RBP15.16■□□□□ 0.02
TSPAN4-208ENST00000409531 FBXW4P57775 412 aa15.16■□□□□ 0.02
TSPAN4-208ENST00000409531 CHRNEQ04844 493 aa15.16■□□□□ 0.02
TSPAN4-208ENST00000409531 TRIM25Q14258 630 aaKnown RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms