RNA–Protein interactions for RNA: ENST00000409254.1

LIMS2-203, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMS2, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-203ENST00000409254 C10orf111Q8N326 155 aa11.98□□□□□ -0.49
LIMS2-203ENST00000409254 FBXW8Q8N3Y1 598 aa11.98□□□□□ -0.49
LIMS2-203ENST00000409254 TOR1AIP2Q8NFQ8 470 aa11.98□□□□□ -0.49
LIMS2-203ENST00000409254 FBXO30Q8TB52 745 aa11.98□□□□□ -0.49
LIMS2-203ENST00000409254 SPPL2AQ8TCT8 520 aa11.98□□□□□ -0.49
LIMS2-203ENST00000409254 THAP3Q8WTV1 239 aaPredicted RBP11.98□□□□□ -0.49
LIMS2-203ENST00000409254 HGDQ93099 445 aa11.98□□□□□ -0.49
LIMS2-203ENST00000409254 WBP1Q96G27 269 aa11.98□□□□□ -0.49
LIMS2-203ENST00000409254 FRMD6Q96NE9 622 aa11.98□□□□□ -0.49
LIMS2-203ENST00000409254 RAB3IPQ96QF0 476 aaPredicted RBP11.98□□□□□ -0.49
LIMS2-203ENST00000409254 ZMIZ1Q9ULJ6 1067 aa11.98□□□□□ -0.49
LIMS2-203ENST00000409254 SLC35A3Q9Y2D2 325 aa11.98□□□□□ -0.49
LIMS2-203ENST00000409254 CHCHD2Q9Y6H1 151 aaPredicted RBP11.98□□□□□ -0.49
LIMS2-203ENST00000409254 PRAMEF27A3QJZ7 478 aa11.97□□□□□ -0.49
LIMS2-203ENST00000409254 CFAP73A6NFT4 308 aa11.97□□□□□ -0.49
LIMS2-203ENST00000409254 H3BNH8 94 aa11.97□□□□□ -0.49
LIMS2-203ENST00000409254 SYT5O00445 386 aa11.97□□□□□ -0.49
LIMS2-203ENST00000409254 SNX4O95219 450 aa11.97□□□□□ -0.49
LIMS2-203ENST00000409254 STAMBPO95630 424 aa11.97□□□□□ -0.49
LIMS2-203ENST00000409254 C8BP07358 591 aa11.97□□□□□ -0.49
LIMS2-203ENST00000409254 NUDT7P0C024 238 aa11.97□□□□□ -0.49
LIMS2-203ENST00000409254 NID1P14543 1247 aa11.97□□□□□ -0.49
LIMS2-203ENST00000409254 PRKAR1BP31321 381 aa11.97□□□□□ -0.49
LIMS2-203ENST00000409254 DCTP40126 519 aa11.97□□□□□ -0.49
LIMS2-203ENST00000409254 CCL11P51671 97 aa11.97□□□□□ -0.49
LIMS2-203ENST00000409254 POLE2P56282 527 aa11.97□□□□□ -0.49
LIMS2-203ENST00000409254 TUBA3CQ13748 450 aa11.97□□□□□ -0.49
LIMS2-203ENST00000409254 LARS2Q15031 903 aaKnown RBP11.97□□□□□ -0.49
LIMS2-203ENST00000409254 INAQ16352 499 aa11.97□□□□□ -0.49
LIMS2-203ENST00000409254 SYPL1Q16563 259 aa11.97□□□□□ -0.49
LIMS2-203ENST00000409254 LIN52Q52LA3 116 aa11.97□□□□□ -0.49
LIMS2-203ENST00000409254 LCN8Q6JVE9 175 aa11.97□□□□□ -0.49
LIMS2-203ENST00000409254 SLC30A6Q6NXT4 461 aa11.97□□□□□ -0.49
LIMS2-203ENST00000409254 TUBA3EQ6PEY2 450 aa11.97□□□□□ -0.49
LIMS2-203ENST00000409254 DHRS4L2Q6PKH6 230 aa11.97□□□□□ -0.49
LIMS2-203ENST00000409254 WDR53Q7Z5U6 358 aaPredicted RBP11.97□□□□□ -0.49
LIMS2-203ENST00000409254 GRAMD2AQ8IUY3 354 aa11.97□□□□□ -0.49
LIMS2-203ENST00000409254 ULK2Q8IYT8 1036 aa11.97□□□□□ -0.49
LIMS2-203ENST00000409254 ANKFN1Q8N957 763 aa11.97□□□□□ -0.49
LIMS2-203ENST00000409254 MDS2Q8NDY4 140 aa11.97□□□□□ -0.49
LIMS2-203ENST00000409254 OR4N2Q8NGD1 307 aa11.97□□□□□ -0.49
LIMS2-203ENST00000409254 NFKBIDQ8NI38 313 aa11.97□□□□□ -0.49
LIMS2-203ENST00000409254 MAL2Q969L2 176 aa11.97□□□□□ -0.49
LIMS2-203ENST00000409254 ADOQ96SZ5 270 aa11.97□□□□□ -0.49
LIMS2-203ENST00000409254 THTPAQ9BU02 230 aa11.97□□□□□ -0.49
LIMS2-203ENST00000409254 CADM1Q9BY67 442 aaKnown RBP11.97□□□□□ -0.49
LIMS2-203ENST00000409254 TRIM15Q9C019 465 aa11.97□□□□□ -0.49
LIMS2-203ENST00000409254 RUBCNLQ9H714 662 aa11.97□□□□□ -0.49
LIMS2-203ENST00000409254 TIMMDC1Q9NPL8 285 aa11.97□□□□□ -0.49
LIMS2-203ENST00000409254 EXOSC3Q9NQT5 275 aaKnown RBP11.97□□□□□ -0.49
LIMS2-203ENST00000409254 OLAHQ9NV23 265 aa11.97□□□□□ -0.49
LIMS2-203ENST00000409254 KCNE3Q9Y6H6 103 aa11.97□□□□□ -0.49
LIMS2-203ENST00000409254 IGLV3-32A0A0A0MS00 114 aa11.96□□□□□ -0.49
LIMS2-203ENST00000409254 PRAMEF25A6NGN4 478 aa11.96□□□□□ -0.49
LIMS2-203ENST00000409254 CXCR6O00574 342 aa11.96□□□□□ -0.49
LIMS2-203ENST00000409254 SCDO00767 359 aa11.96□□□□□ -0.49
LIMS2-203ENST00000409254 FADS1O60427 444 aa11.96□□□□□ -0.49
LIMS2-203ENST00000409254 ZNF354AO60765 605 aaPredicted RBP11.96□□□□□ -0.49
LIMS2-203ENST00000409254 UGT2B11O75310 529 aa11.96□□□□□ -0.49
LIMS2-203ENST00000409254 OR6B1O95007 311 aa11.96□□□□□ -0.49
LIMS2-203ENST00000409254 UTS2O95399 124 aa11.96□□□□□ -0.49
LIMS2-203ENST00000409254 ZIC2O95409 532 aaPredicted RBP11.96□□□□□ -0.49
LIMS2-203ENST00000409254 OXSR1O95747 527 aaPredicted RBP11.96□□□□□ -0.49
LIMS2-203ENST00000409254 IGKV1D-16P01601 117 aa11.96□□□□□ -0.49
LIMS2-203ENST00000409254 C1QCP02747 245 aa11.96□□□□□ -0.49
LIMS2-203ENST00000409254 CYP4B1P13584 511 aa11.96□□□□□ -0.49
LIMS2-203ENST00000409254 HPGDP15428 266 aa11.96□□□□□ -0.49
LIMS2-203ENST00000409254 KDELR2P33947 212 aa11.96□□□□□ -0.49
LIMS2-203ENST00000409254 EVI2BP34910 448 aa11.96□□□□□ -0.49
LIMS2-203ENST00000409254 SUMO3P55854 103 aaPredicted RBP11.96□□□□□ -0.49
LIMS2-203ENST00000409254 KLHL26Q53HC5 615 aa11.96□□□□□ -0.49
LIMS2-203ENST00000409254 SLC22A10Q63ZE4 541 aa11.96□□□□□ -0.49
LIMS2-203ENST00000409254 B3GNTL1Q67FW5 361 aaPredicted RBP11.96□□□□□ -0.49
LIMS2-203ENST00000409254 FIGNL1Q6PIW4 674 aa11.96□□□□□ -0.49
LIMS2-203ENST00000409254 ZNF440Q8IYI8 595 aa11.96□□□□□ -0.49
LIMS2-203ENST00000409254 TMEM178AQ8NBL3 297 aa11.96□□□□□ -0.49
LIMS2-203ENST00000409254 FAM71CQ8NEG0 241 aa11.96□□□□□ -0.49
LIMS2-203ENST00000409254 EFHD2Q96C19 240 aaPredicted RBP11.96□□□□□ -0.49
LIMS2-203ENST00000409254 TRIM8Q9BZR9 551 aa11.96□□□□□ -0.49
LIMS2-203ENST00000409254 SDHAF3Q9NRP4 125 aa11.96□□□□□ -0.49
LIMS2-203ENST00000409254 SACM1LQ9NTJ5 587 aa11.96□□□□□ -0.49
LIMS2-203ENST00000409254 LRFN1Q9P244 771 aa11.96□□□□□ -0.49
LIMS2-203ENST00000409254 RPS6KA6Q9UK32 745 aa11.96□□□□□ -0.49
LIMS2-203ENST00000409254 ZNF232Q9UNY5 417 aa11.96□□□□□ -0.49
LIMS2-203ENST00000409254 SAMD4AQ9UPU9 718 aaKnown RBP11.96□□□□□ -0.49
LIMS2-203ENST00000409254 KLF13Q9Y2Y9 288 aaPredicted RBP11.96□□□□□ -0.49
LIMS2-203ENST00000409254 DTNAQ9Y4J8 743 aa11.96□□□□□ -0.49
LIMS2-203ENST00000409254 TRAV17A0A0B4J275 112 aa11.95□□□□□ -0.5
LIMS2-203ENST00000409254 ERVH48-1M5A8F1 160 aa11.95□□□□□ -0.5
LIMS2-203ENST00000409254 ARPC2O15144 300 aa11.95□□□□□ -0.5
LIMS2-203ENST00000409254 GSTA4O15217 222 aa11.95□□□□□ -0.5
LIMS2-203ENST00000409254 FCMRO60667 390 aa11.95□□□□□ -0.5
LIMS2-203ENST00000409254 DPM1O60762 260 aa11.95□□□□□ -0.5
LIMS2-203ENST00000409254 ICOSLGO75144 302 aa11.95□□□□□ -0.5
LIMS2-203ENST00000409254 UGT2B17O75795 530 aa11.95□□□□□ -0.5
LIMS2-203ENST00000409254 NEURL1O76050 574 aa11.95□□□□□ -0.5
LIMS2-203ENST00000409254 MFN2O95140 757 aa11.95□□□□□ -0.5
LIMS2-203ENST00000409254 WDPCPO95876 746 aa11.95□□□□□ -0.5
LIMS2-203ENST00000409254 PABPC4LP0CB38 370 aaKnown RBP11.95□□□□□ -0.5
LIMS2-203ENST00000409254 ELAVL4P26378 380 aaKnown RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms