RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 B3GNT6Q6ZMB0 384 aa16.32■□□□□ 0.2
PDLIM2-206ENST00000409141 ACAD11Q709F0 780 aa16.32■□□□□ 0.2
PDLIM2-206ENST00000409141 OR4C3Q8NH37 302 aa16.32■□□□□ 0.2
PDLIM2-206ENST00000409141 CKAP2Q8WWK9 683 aa16.32■□□□□ 0.2
PDLIM2-206ENST00000409141 RND1Q92730 232 aa16.32■□□□□ 0.2
PDLIM2-206ENST00000409141 ABTB1Q969K4 478 aaPredicted RBP16.32■□□□□ 0.2
PDLIM2-206ENST00000409141 OR2B2Q9GZK3 357 aa16.32■□□□□ 0.2
PDLIM2-206ENST00000409141 COQ3Q9NZJ6 369 aa16.32■□□□□ 0.2
PDLIM2-206ENST00000409141 MED11Q9P086 117 aa16.32■□□□□ 0.2
PDLIM2-206ENST00000409141 DKKL1Q9UK85 242 aa16.32■□□□□ 0.2
PDLIM2-206ENST00000409141 ANGPTL1O95841 491 aa16.31■□□□□ 0.2
PDLIM2-206ENST00000409141 HPGDP15428 266 aa16.31■□□□□ 0.2
PDLIM2-206ENST00000409141 ATP6V1C1P21283 382 aa16.31■□□□□ 0.2
PDLIM2-206ENST00000409141 TBXA2RP21731 343 aa16.31■□□□□ 0.2
PDLIM2-206ENST00000409141 MATN1P21941 496 aa16.31■□□□□ 0.2
PDLIM2-206ENST00000409141 UQCRC2P22695 453 aa16.31■□□□□ 0.2
PDLIM2-206ENST00000409141 LCN1P31025 176 aa16.31■□□□□ 0.2
PDLIM2-206ENST00000409141 PDCD4Q53EL6 469 aaKnown RBP16.31■□□□□ 0.2
PDLIM2-206ENST00000409141 NHSL2Q5HYW2 709 aa16.31■□□□□ 0.2
PDLIM2-206ENST00000409141 C1orf185Q5T7R7 199 aa16.31■□□□□ 0.2
PDLIM2-206ENST00000409141 RTL6Q6ICC9 239 aa16.31■□□□□ 0.2
PDLIM2-206ENST00000409141 APOOLQ6UXV4 268 aa16.31■□□□□ 0.2
PDLIM2-206ENST00000409141 ZAR1Q86SH2 424 aa16.31■□□□□ 0.2
PDLIM2-206ENST00000409141 ULK2Q8IYT8 1036 aa16.31■□□□□ 0.2
PDLIM2-206ENST00000409141 GLB1L3Q8NCI6 653 aaPredicted RBP16.31■□□□□ 0.2
PDLIM2-206ENST00000409141 OR2M3Q8NG83 312 aa16.31■□□□□ 0.2
PDLIM2-206ENST00000409141 OR10Q1Q8NGQ4 319 aa16.31■□□□□ 0.2
PDLIM2-206ENST00000409141 SDCCAG3Q96C92 435 aa16.31■□□□□ 0.2
PDLIM2-206ENST00000409141 MAGEB18Q96M61 343 aa16.31■□□□□ 0.2
PDLIM2-206ENST00000409141 OR7D2Q96RA2 312 aa16.31■□□□□ 0.2
PDLIM2-206ENST00000409141 OR52E6Q96RD3 313 aa16.31■□□□□ 0.2
PDLIM2-206ENST00000409141 UGT2B28Q9BY64 529 aa16.31■□□□□ 0.2
PDLIM2-206ENST00000409141 UBQLN4Q9NRR5 601 aa16.31■□□□□ 0.2
PDLIM2-206ENST00000409141 ZNF446Q9NWS9 450 aa16.31■□□□□ 0.2
PDLIM2-206ENST00000409141 BTNL2Q9UIR0 455 aa16.31■□□□□ 0.2
PDLIM2-206ENST00000409141 MRPS18CQ9Y3D5 142 aaKnown RBP16.31■□□□□ 0.2
PDLIM2-206ENST00000409141 FAM215AQ9Y5M1 114 aa16.31■□□□□ 0.2
PDLIM2-206ENST00000409141 KCNE3Q9Y6H6 103 aa16.31■□□□□ 0.2
PDLIM2-206ENST00000409141 DUXAA6NLW8 204 aa16.3■□□□□ 0.2
PDLIM2-206ENST00000409141 PRSS44E7EML9 344 aa16.3■□□□□ 0.2
PDLIM2-206ENST00000409141 OXSR1O95747 527 aaPredicted RBP16.3■□□□□ 0.2
PDLIM2-206ENST00000409141 ACTL6AO96019 429 aa16.3■□□□□ 0.2
PDLIM2-206ENST00000409141 PGRP06401 933 aa16.3■□□□□ 0.2
PDLIM2-206ENST00000409141 NGFRP08138 427 aa16.3■□□□□ 0.2
PDLIM2-206ENST00000409141 DSCR4P56555 118 aaPredicted RBP16.3■□□□□ 0.2
PDLIM2-206ENST00000409141 NUP107P57740 925 aa16.3■□□□□ 0.2
PDLIM2-206ENST00000409141 RPS26P62854 115 aaKnown RBP16.3■□□□□ 0.2
PDLIM2-206ENST00000409141 C17orf67Q0P5P2 114 aa16.3■□□□□ 0.2
PDLIM2-206ENST00000409141 DCST2Q5T1A1 773 aa16.3■□□□□ 0.2
PDLIM2-206ENST00000409141 IFNEQ86WN2 208 aa16.3■□□□□ 0.2
PDLIM2-206ENST00000409141 PM20D2Q8IYS1 436 aa16.3■□□□□ 0.2
PDLIM2-206ENST00000409141 FADS6Q8N9I5 356 aa16.3■□□□□ 0.2
PDLIM2-206ENST00000409141 OR5D16Q8NGK9 328 aa16.3■□□□□ 0.2
PDLIM2-206ENST00000409141 SLC35G5Q96KT7 338 aa16.3■□□□□ 0.2
PDLIM2-206ENST00000409141 CCDC115Q96NT0 180 aa16.3■□□□□ 0.2
PDLIM2-206ENST00000409141 TTYH2Q9BSA4 534 aa16.3■□□□□ 0.2
PDLIM2-206ENST00000409141 PTGES2Q9H7Z7 377 aa16.3■□□□□ 0.2
PDLIM2-206ENST00000409141 CAMK2AQ9UQM7 478 aa16.3■□□□□ 0.2
PDLIM2-206ENST00000409141 AHRRA9YTQ3 701 aa16.29■□□□□ 0.2
PDLIM2-206ENST00000409141 B4DXG7 233 aa16.29■□□□□ 0.2
PDLIM2-206ENST00000409141 ALG1L2C9J202 215 aa16.29■□□□□ 0.2
PDLIM2-206ENST00000409141 POLR3GO15318 223 aaPredicted RBP16.29■□□□□ 0.2
PDLIM2-206ENST00000409141 NDUFB5O43674 189 aa16.29■□□□□ 0.2
PDLIM2-206ENST00000409141 ZIC3O60481 467 aa16.29■□□□□ 0.2
PDLIM2-206ENST00000409141 CLDN14O95500 239 aa16.29■□□□□ 0.2
PDLIM2-206ENST00000409141 IL6P05231 212 aa16.29■□□□□ 0.2
PDLIM2-206ENST00000409141 TCEA1P23193 301 aaKnown RBP16.29■□□□□ 0.2
PDLIM2-206ENST00000409141 PTGER4P35408 488 aa16.29■□□□□ 0.2
PDLIM2-206ENST00000409141 IDH3AP50213 366 aa16.29■□□□□ 0.2
PDLIM2-206ENST00000409141 AQP5P55064 265 aa16.29■□□□□ 0.2
PDLIM2-206ENST00000409141 CASP9P55211 416 aa16.29■□□□□ 0.2
PDLIM2-206ENST00000409141 DCST1Q5T197 706 aa16.29■□□□□ 0.2
PDLIM2-206ENST00000409141 SP5Q6BEB4 398 aaPredicted RBP16.29■□□□□ 0.2
PDLIM2-206ENST00000409141 CA5BP1Q8WTZ4 195 aa16.29■□□□□ 0.2
PDLIM2-206ENST00000409141 PANX1Q96RD7 426 aa16.29■□□□□ 0.2
PDLIM2-206ENST00000409141 PRDM14Q9GZV8 571 aa16.29■□□□□ 0.2
PDLIM2-206ENST00000409141 TCF7L2Q9NQB0 619 aa16.29■□□□□ 0.2
PDLIM2-206ENST00000409141 SDR39U1Q9NRG7 319 aaPredicted RBP16.29■□□□□ 0.2
PDLIM2-206ENST00000409141 ZIM2Q9NZV7 527 aa16.29■□□□□ 0.2
PDLIM2-206ENST00000409141 RPH3AQ9Y2J0 694 aaPredicted RBP16.29■□□□□ 0.2
PDLIM2-206ENST00000409141 KLF2Q9Y5W3 355 aaPredicted RBP16.29■□□□□ 0.2
PDLIM2-206ENST00000409141 SCDO00767 359 aa16.29■□□□□ 0.2
PDLIM2-206ENST00000409141 GMFGO60234 142 aa16.29■□□□□ 0.2
PDLIM2-206ENST00000409141 GLI4P10075 376 aa16.29■□□□□ 0.2
PDLIM2-206ENST00000409141 HK1P19367 917 aa16.29■□□□□ 0.2
PDLIM2-206ENST00000409141 HTR1EP28566 365 aa16.29■□□□□ 0.2
PDLIM2-206ENST00000409141 CHI3L1P36222 383 aaPredicted RBP16.29■□□□□ 0.2
PDLIM2-206ENST00000409141 LRRC74AQ0VAA2 488 aa16.29■□□□□ 0.2
PDLIM2-206ENST00000409141 SF3B4Q15427 424 aaKnown RBP eCLIP16.29■□□□□ 0.2
PDLIM2-206ENST00000409141 CDSNQ15517 529 aa16.29■□□□□ 0.2
PDLIM2-206ENST00000409141 AAGABQ6PD74 315 aa16.29■□□□□ 0.2
PDLIM2-206ENST00000409141 ENPP6Q6UWR7 440 aa16.29■□□□□ 0.2
PDLIM2-206ENST00000409141 MIER2Q8N344 545 aa16.29■□□□□ 0.2
PDLIM2-206ENST00000409141 TRIML2Q8N7C3 387 aa16.29■□□□□ 0.2
PDLIM2-206ENST00000409141 GATSQ8NAP1 163 aa16.29■□□□□ 0.2
PDLIM2-206ENST00000409141 GOT1L1Q8NHS2 421 aaPredicted RBP16.29■□□□□ 0.2
PDLIM2-206ENST00000409141 ASB5Q8WWX0 329 aa16.29■□□□□ 0.2
PDLIM2-206ENST00000409141 WDYHV1Q96HA8 205 aa16.29■□□□□ 0.2
PDLIM2-206ENST00000409141 SFXN2Q96NB2 322 aa16.29■□□□□ 0.2
PDLIM2-206ENST00000409141 SLC35A5Q9BS91 424 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms