RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 CHDHQ8NE62 594 aaPredicted RBP4□□□□□ -1.77
HMGB3P18-201ENST00000406327 MCHR2Q969V1 340 aa4□□□□□ -1.77
HMGB3P18-201ENST00000406327 C11orf52Q96A22 123 aa4□□□□□ -1.77
HMGB3P18-201ENST00000406327 CNRIP1Q96F85 164 aaPredicted RBP4□□□□□ -1.77
HMGB3P18-201ENST00000406327 HPDLQ96IR7 371 aa4□□□□□ -1.77
HMGB3P18-201ENST00000406327 VSTM2LQ96N03 204 aa4□□□□□ -1.77
HMGB3P18-201ENST00000406327 TNFRSF13CQ96RJ3 184 aa4□□□□□ -1.77
HMGB3P18-201ENST00000406327 TBCDQ9BTW9 1192 aa4□□□□□ -1.77
HMGB3P18-201ENST00000406327 RBM4Q9BWF3 364 aaKnown RBP4□□□□□ -1.77
HMGB3P18-201ENST00000406327 KAT8Q9H7Z6 458 aaKnown RBP4□□□□□ -1.77
HMGB3P18-201ENST00000406327 RMND5AQ9H871 391 aa4□□□□□ -1.77
HMGB3P18-201ENST00000406327 MOB1AQ9H8S9 216 aa4□□□□□ -1.77
HMGB3P18-201ENST00000406327 STARD5Q9NSY2 213 aa4□□□□□ -1.77
HMGB3P18-201ENST00000406327 RDH8Q9NYR8 311 aa4□□□□□ -1.77
HMGB3P18-201ENST00000406327 THYN1Q9P016 225 aa4□□□□□ -1.77
HMGB3P18-201ENST00000406327 C6orf203Q9P0P8 240 aaPredicted RBP4□□□□□ -1.77
HMGB3P18-201ENST00000406327 TBK1Q9UHD2 729 aa4□□□□□ -1.77
HMGB3P18-201ENST00000406327 XPO7Q9UIA9 1087 aaKnown RBP4□□□□□ -1.77
HMGB3P18-201ENST00000406327 PURGQ9UJV8 347 aaKnown RBP4□□□□□ -1.77
HMGB3P18-201ENST00000406327 DHRS7Q9Y394 339 aa4□□□□□ -1.77
HMGB3P18-201ENST00000406327 PYGO1Q9Y3Y4 419 aa4□□□□□ -1.77
HMGB3P18-201ENST00000406327 PHLPP1O60346 1717 aa4□□□□□ -1.77
HMGB3P18-201ENST00000406327 ITGB4P16144 1822 aa4□□□□□ -1.77
HMGB3P18-201ENST00000406327 SF3B1O75533 1304 aaKnown RBP eCLIP3.99□□□□□ -1.77
HMGB3P18-201ENST00000406327 DOT1LQ8TEK3 1739 aa3.99□□□□□ -1.77
HMGB3P18-201ENST00000406327 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.99□□□□□ -1.77
HMGB3P18-201ENST00000406327 NWD2Q9ULI1 1742 aa3.99□□□□□ -1.77
HMGB3P18-201ENST00000406327 IGLV7-46A0A075B6I9 117 aa3.99□□□□□ -1.77
HMGB3P18-201ENST00000406327 A0A087WWV3 80 aa3.99□□□□□ -1.77
HMGB3P18-201ENST00000406327 A0A0A6YYD4 124 aa3.99□□□□□ -1.77
HMGB3P18-201ENST00000406327 TTC26A0AVF1 554 aa3.99□□□□□ -1.77
HMGB3P18-201ENST00000406327 LRIT2A6NDA9 550 aa3.99□□□□□ -1.77
HMGB3P18-201ENST00000406327 IGLON5A6NGN9 336 aa3.99□□□□□ -1.77
HMGB3P18-201ENST00000406327 GLTPD2A6NH11 291 aa3.99□□□□□ -1.77
HMGB3P18-201ENST00000406327 FBLL1A6NHQ2 334 aaKnown RBP3.99□□□□□ -1.77
HMGB3P18-201ENST00000406327 ZNF724A8MTY0 619 aa3.99□□□□□ -1.77
HMGB3P18-201ENST00000406327 MPTX1A8MV57 137 aa3.99□□□□□ -1.77
HMGB3P18-201ENST00000406327 NPIPA2E9PIF3 369 aa3.99□□□□□ -1.77
HMGB3P18-201ENST00000406327 CLDN5O00501 218 aa3.99□□□□□ -1.77
HMGB3P18-201ENST00000406327 NEMFO60524 1076 aa3.99□□□□□ -1.77
HMGB3P18-201ENST00000406327 NMT2O60551 498 aa3.99□□□□□ -1.77
HMGB3P18-201ENST00000406327 PLEKHA8P1O95397 391 aa3.99□□□□□ -1.77
HMGB3P18-201ENST00000406327 SERPINB2P05120 415 aa3.99□□□□□ -1.77
HMGB3P18-201ENST00000406327 SP1P08047 785 aa3.99□□□□□ -1.77
HMGB3P18-201ENST00000406327 HMGB2P26583 209 aaKnown RBP3.99□□□□□ -1.77
HMGB3P18-201ENST00000406327 PTPN4P29074 926 aa3.99□□□□□ -1.77
HMGB3P18-201ENST00000406327 PPP2R1BP30154 601 aa3.99□□□□□ -1.77
HMGB3P18-201ENST00000406327 TRIM23P36406 574 aa3.99□□□□□ -1.77
HMGB3P18-201ENST00000406327 ID1P41134 155 aa3.99□□□□□ -1.77
HMGB3P18-201ENST00000406327 SLC7A2P52569 658 aa3.99□□□□□ -1.77
HMGB3P18-201ENST00000406327 TPM4P67936 248 aa3.99□□□□□ -1.77
HMGB3P18-201ENST00000406327 MRPS6P82932 125 aaKnown RBP3.99□□□□□ -1.77
HMGB3P18-201ENST00000406327 NAAAQ02083 359 aa3.99□□□□□ -1.77
HMGB3P18-201ENST00000406327 EXOSC2Q13868 293 aaKnown RBP3.99□□□□□ -1.77
HMGB3P18-201ENST00000406327 TRIP10Q15642 601 aa3.99□□□□□ -1.77
HMGB3P18-201ENST00000406327 ZNF699Q32M78 642 aa3.99□□□□□ -1.77
HMGB3P18-201ENST00000406327 ANKRD55Q3KP44 614 aa3.99□□□□□ -1.77
HMGB3P18-201ENST00000406327 MOGAT2Q3SYC2 334 aa3.99□□□□□ -1.77
HMGB3P18-201ENST00000406327 CFAP157Q5JU67 520 aa3.99□□□□□ -1.77
HMGB3P18-201ENST00000406327 DMKNQ6E0U4 476 aaPredicted RBP3.99□□□□□ -1.77
HMGB3P18-201ENST00000406327 SULT1C3Q6IMI6 304 aa3.99□□□□□ -1.77
HMGB3P18-201ENST00000406327 PRR5LQ6MZQ0 368 aa3.99□□□□□ -1.77
HMGB3P18-201ENST00000406327 SLC39A4Q6P5W5 647 aa3.99□□□□□ -1.77
HMGB3P18-201ENST00000406327 Q6ZRP5 223 aa3.99□□□□□ -1.77
HMGB3P18-201ENST00000406327 MOB2Q70IA6 237 aa3.99□□□□□ -1.77
HMGB3P18-201ENST00000406327 LPCAT2Q7L5N7 544 aa3.99□□□□□ -1.77
HMGB3P18-201ENST00000406327 LRRC8AQ8IWT6 810 aa3.99□□□□□ -1.77
HMGB3P18-201ENST00000406327 ZNF614Q8N883 585 aa3.99□□□□□ -1.77
HMGB3P18-201ENST00000406327 BANPQ8N9N5 519 aa3.99□□□□□ -1.77
HMGB3P18-201ENST00000406327 ATXN7L3BQ96GX2 97 aa3.99□□□□□ -1.77
HMGB3P18-201ENST00000406327 AGAP4Q96P64 663 aa3.99□□□□□ -1.77
HMGB3P18-201ENST00000406327 ERP44Q9BS26 406 aa3.99□□□□□ -1.77
HMGB3P18-201ENST00000406327 GSDMCQ9BYG8 508 aa3.99□□□□□ -1.77
HMGB3P18-201ENST00000406327 TRIM6Q9C030 488 aaPredicted RBP3.99□□□□□ -1.77
HMGB3P18-201ENST00000406327 WDR41Q9HAD4 459 aa3.99□□□□□ -1.77
HMGB3P18-201ENST00000406327 ELL3Q9HB65 397 aaPredicted RBP3.99□□□□□ -1.77
HMGB3P18-201ENST00000406327 CD209Q9NNX6 404 aa3.99□□□□□ -1.77
HMGB3P18-201ENST00000406327 DEPPQ9NTK1 212 aa3.99□□□□□ -1.77
HMGB3P18-201ENST00000406327 BARHL2Q9NY43 387 aa3.99□□□□□ -1.77
HMGB3P18-201ENST00000406327 SEC14L4Q9UDX3 406 aa3.99□□□□□ -1.77
HMGB3P18-201ENST00000406327 EMCNQ9ULC0 261 aa3.99□□□□□ -1.77
HMGB3P18-201ENST00000406327 PYCARDQ9ULZ3 195 aa3.99□□□□□ -1.77
HMGB3P18-201ENST00000406327 RNF6Q9Y252 685 aa3.99□□□□□ -1.77
HMGB3P18-201ENST00000406327 EXOGQ9Y2C4 368 aaKnown RBP3.99□□□□□ -1.77
HMGB3P18-201ENST00000406327 COL4A1P02462 1669 aa3.99□□□□□ -1.77
HMGB3P18-201ENST00000406327 MROH7-TTC4A0A0A0MT08 1334 aa3.98□□□□□ -1.77
HMGB3P18-201ENST00000406327 ZNF831Q5JPB2 1677 aa3.98□□□□□ -1.77
HMGB3P18-201ENST00000406327 UQCRHLA0A096LP55 91 aa3.98□□□□□ -1.77
HMGB3P18-201ENST00000406327 IGHV3-38A0A0C4DH36 116 aa3.98□□□□□ -1.77
HMGB3P18-201ENST00000406327 A0A0J9YVX5 310 aa3.98□□□□□ -1.77
HMGB3P18-201ENST00000406327 GSAPA4D1B5 854 aa3.98□□□□□ -1.77
HMGB3P18-201ENST00000406327 WASHC1A8K0Z3 465 aa3.98□□□□□ -1.77
HMGB3P18-201ENST00000406327 NR5A2O00482 541 aa3.98□□□□□ -1.77
HMGB3P18-201ENST00000406327 ECDO95905 644 aaPredicted RBP3.98□□□□□ -1.77
HMGB3P18-201ENST00000406327 AMBPP02760 352 aa3.98□□□□□ -1.77
HMGB3P18-201ENST00000406327 UQCRHP07919 91 aa3.98□□□□□ -1.77
HMGB3P18-201ENST00000406327 GBX2P52951 348 aaPredicted RBP3.98□□□□□ -1.77
HMGB3P18-201ENST00000406327 RPS27AP62979 156 aaKnown RBP3.98□□□□□ -1.77
HMGB3P18-201ENST00000406327 ZP4Q12836 540 aa3.98□□□□□ -1.77
HMGB3P18-201ENST00000406327 SNTB2Q13425 540 aaKnown RBP3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms