RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 GUSBP08236 651 aa30.54■■■□□ 2.48
CSNK1E-204ENST00000403904 HNRNPCL4P0DMR1 293 aa30.54■■■□□ 2.48
CSNK1E-204ENST00000403904 LCN1P31025 176 aa30.54■■■□□ 2.48
CSNK1E-204ENST00000403904 TNFSF10P50591 281 aa30.54■■■□□ 2.48
CSNK1E-204ENST00000403904 AP1ARQ63HQ0 302 aa30.54■■■□□ 2.48
CSNK1E-204ENST00000403904 SLC22A10Q63ZE4 541 aa30.54■■■□□ 2.48
CSNK1E-204ENST00000403904 MTHFD2LQ9H903 347 aaPredicted RBP30.54■■■□□ 2.48
CSNK1E-204ENST00000403904 ZNF71Q9NQZ8 489 aaPredicted RBP30.54■■■□□ 2.48
CSNK1E-204ENST00000403904 UBQLN4Q9NRR5 601 aa30.54■■■□□ 2.48
CSNK1E-204ENST00000403904 PCDHGA10Q9Y5H3 936 aa30.54■■■□□ 2.48
CSNK1E-204ENST00000403904 BSNQ9UPA5 3926 aa30.53■■■□□ 2.48
CSNK1E-204ENST00000403904 GSC2O15499 205 aa30.53■■■□□ 2.48
CSNK1E-204ENST00000403904 SLC25A12O75746 678 aa30.53■■■□□ 2.48
CSNK1E-204ENST00000403904 DNAJC8O75937 253 aaPredicted RBP30.53■■■□□ 2.48
CSNK1E-204ENST00000403904 PDE5AO76074 875 aa30.53■■■□□ 2.48
CSNK1E-204ENST00000403904 HSD17B1P14061 328 aa30.53■■■□□ 2.48
CSNK1E-204ENST00000403904 ATP12AP54707 1039 aa30.53■■■□□ 2.48
CSNK1E-204ENST00000403904 ZSCAN26Q16670 478 aa30.53■■■□□ 2.48
CSNK1E-204ENST00000403904 PRAMEF8Q5VWM4 474 aa30.53■■■□□ 2.48
CSNK1E-204ENST00000403904 PRAMEF7Q5VXH5 474 aa30.53■■■□□ 2.48
CSNK1E-204ENST00000403904 ARHGAP24Q8N264 748 aa30.53■■■□□ 2.48
CSNK1E-204ENST00000403904 PSD4Q8NDX1 1056 aa30.53■■■□□ 2.48
CSNK1E-204ENST00000403904 BBS10Q8TAM1 723 aa30.53■■■□□ 2.48
CSNK1E-204ENST00000403904 GRHL3Q8TE85 626 aa30.53■■■□□ 2.48
CSNK1E-204ENST00000403904 CADM1Q9BY67 442 aaKnown RBP30.53■■■□□ 2.48
CSNK1E-204ENST00000403904 HES7Q9BYE0 225 aa30.53■■■□□ 2.48
CSNK1E-204ENST00000403904 LRMDAQ9H2I8 198 aa30.53■■■□□ 2.48
CSNK1E-204ENST00000403904 ADNPQ9H2P0 1102 aa30.53■■■□□ 2.48
CSNK1E-204ENST00000403904 TUBD1Q9UJT1 453 aa30.53■■■□□ 2.48
CSNK1E-204ENST00000403904 NINQ8N4C6 2090 aa30.52■■■□□ 2.48
CSNK1E-204ENST00000403904 DSPPQ9NZW4 1301 aa30.52■■■□□ 2.48
CSNK1E-204ENST00000403904 CENPVL1A0A0U1RR11 272 aa30.52■■■□□ 2.48
CSNK1E-204ENST00000403904 NPIPB9F8W1W9 429 aa30.52■■■□□ 2.48
CSNK1E-204ENST00000403904 UGT2B17O75795 530 aa30.52■■■□□ 2.48
CSNK1E-204ENST00000403904 SORBS2O94875 1100 aaKnown RBP30.52■■■□□ 2.48
CSNK1E-204ENST00000403904 OXSR1O95747 527 aaPredicted RBP30.52■■■□□ 2.48
CSNK1E-204ENST00000403904 TBXA2RP21731 343 aa30.52■■■□□ 2.48
CSNK1E-204ENST00000403904 EVI2BP34910 448 aa30.52■■■□□ 2.48
CSNK1E-204ENST00000403904 PRAMEF20Q5VT98 475 aa30.52■■■□□ 2.48
CSNK1E-204ENST00000403904 APOOLQ6UXV4 268 aa30.52■■■□□ 2.48
CSNK1E-204ENST00000403904 C9orf43Q8TAL5 461 aaPredicted RBP30.52■■■□□ 2.48
CSNK1E-204ENST00000403904 SECISBP2Q96T21 854 aaKnown RBP30.52■■■□□ 2.48
CSNK1E-204ENST00000403904 HOXD1Q9GZZ0 328 aa30.52■■■□□ 2.48
CSNK1E-204ENST00000403904 METTL7AQ9H8H3 244 aa30.52■■■□□ 2.48
CSNK1E-204ENST00000403904 TIMMDC1Q9NPL8 285 aa30.52■■■□□ 2.48
CSNK1E-204ENST00000403904 EGFL7Q9UHF1 273 aa30.52■■■□□ 2.48
CSNK1E-204ENST00000403904 CNOT11Q9UKZ1 510 aaKnown RBP30.52■■■□□ 2.48
CSNK1E-204ENST00000403904 FADS1O60427 444 aa30.51■■■□□ 2.47
CSNK1E-204ENST00000403904 GCM2O75603 506 aaPredicted RBP30.51■■■□□ 2.47
CSNK1E-204ENST00000403904 RNF144AP50876 292 aaPredicted RBP30.51■■■□□ 2.47
CSNK1E-204ENST00000403904 RPP38P78345 283 aaKnown RBP30.51■■■□□ 2.47
CSNK1E-204ENST00000403904 VEZF1Q14119 521 aa30.51■■■□□ 2.47
CSNK1E-204ENST00000403904 MAPK14Q16539 360 aa30.51■■■□□ 2.47
CSNK1E-204ENST00000403904 ASB18Q6ZVZ8 466 aa30.51■■■□□ 2.47
CSNK1E-204ENST00000403904 SLC30A8Q8IWU4 369 aa30.51■■■□□ 2.47
CSNK1E-204ENST00000403904 EXD3Q8N9H8 876 aa30.51■■■□□ 2.47
CSNK1E-204ENST00000403904 KLHL1Q9NR64 748 aa30.51■■■□□ 2.47
CSNK1E-204ENST00000403904 EPG5Q9HCE0 2579 aa30.5■■■□□ 2.47
CSNK1E-204ENST00000403904 G3V3Y1 287 aa30.5■■■□□ 2.47
CSNK1E-204ENST00000403904 GSTA4O15217 222 aa30.5■■■□□ 2.47
CSNK1E-204ENST00000403904 HPGDP15428 266 aa30.5■■■□□ 2.47
CSNK1E-204ENST00000403904 HTR1EP28566 365 aa30.5■■■□□ 2.47
CSNK1E-204ENST00000403904 CASP3P42574 277 aa30.5■■■□□ 2.47
CSNK1E-204ENST00000403904 SPATS1Q496A3 300 aa30.5■■■□□ 2.47
CSNK1E-204ENST00000403904 PDZK1Q5T2W1 519 aa30.5■■■□□ 2.47
CSNK1E-204ENST00000403904 ZNF614Q8N883 585 aa30.5■■■□□ 2.47
CSNK1E-204ENST00000403904 POGLUT1Q8NBL1 392 aa30.5■■■□□ 2.47
CSNK1E-204ENST00000403904 KLRF1Q9NZS2 232 aa30.5■■■□□ 2.47
CSNK1E-204ENST00000403904 CNIH4Q9P003 139 aa30.5■■■□□ 2.47
CSNK1E-204ENST00000403904 PRAMEF25A6NGN4 478 aa30.49■■■□□ 2.47
CSNK1E-204ENST00000403904 P04436 131 aa30.49■■■□□ 2.47
CSNK1E-204ENST00000403904 PGM1P36871 562 aa30.49■■■□□ 2.47
CSNK1E-204ENST00000403904 PCBP3P57721 371 aaKnown RBP30.49■■■□□ 2.47
CSNK1E-204ENST00000403904 INTS11Q5TA45 600 aaKnown RBP30.49■■■□□ 2.47
CSNK1E-204ENST00000403904 ASRGL1Q7L266 308 aa30.49■■■□□ 2.47
CSNK1E-204ENST00000403904 YTHDF3Q7Z739 585 aaKnown RBP30.49■■■□□ 2.47
CSNK1E-204ENST00000403904 HPS6Q86YV9 775 aa30.49■■■□□ 2.47
CSNK1E-204ENST00000403904 FBXW8Q8N3Y1 598 aa30.49■■■□□ 2.47
CSNK1E-204ENST00000403904 FIG4Q92562 907 aa30.49■■■□□ 2.47
CSNK1E-204ENST00000403904 RTN4RQ9BZR6 473 aa30.49■■■□□ 2.47
CSNK1E-204ENST00000403904 GALNT9Q9HCQ5 603 aa30.49■■■□□ 2.47
CSNK1E-204ENST00000403904 SACM1LQ9NTJ5 587 aa30.49■■■□□ 2.47
CSNK1E-204ENST00000403904 AGAP5A6NIR3 686 aa30.49■■■□□ 2.47
CSNK1E-204ENST00000403904 SCDO00767 359 aa30.49■■■□□ 2.47
CSNK1E-204ENST00000403904 SP1P08047 785 aa30.49■■■□□ 2.47
CSNK1E-204ENST00000403904 NGFRP08138 427 aa30.49■■■□□ 2.47
CSNK1E-204ENST00000403904 CD46P15529 392 aa30.49■■■□□ 2.47
CSNK1E-204ENST00000403904 NCK1P16333 377 aa30.49■■■□□ 2.47
CSNK1E-204ENST00000403904 ZNF141Q15928 474 aa30.49■■■□□ 2.47
CSNK1E-204ENST00000403904 SLC25A25Q6KCM7 469 aa30.49■■■□□ 2.47
CSNK1E-204ENST00000403904 MARCH3Q86UD3 253 aa30.49■■■□□ 2.47
CSNK1E-204ENST00000403904 RBMXL3Q8N7X1 1067 aaKnown RBP30.49■■■□□ 2.47
CSNK1E-204ENST00000403904 ZNF527Q8NB42 609 aa30.49■■■□□ 2.47
CSNK1E-204ENST00000403904 TNIP2Q8NFZ5 429 aa30.49■■■□□ 2.47
CSNK1E-204ENST00000403904 RNF138Q8WVD3 245 aa30.49■■■□□ 2.47
CSNK1E-204ENST00000403904 MCUR1Q96AQ8 359 aa30.49■■■□□ 2.47
CSNK1E-204ENST00000403904 TBL1XR1Q9BZK7 514 aa30.49■■■□□ 2.47
CSNK1E-204ENST00000403904 ABCG2Q9UNQ0 655 aa30.49■■■□□ 2.47
CSNK1E-204ENST00000403904 C2orf72A6NCS6 295 aa30.48■■■□□ 2.47
CSNK1E-204ENST00000403904 SCO2O43819 266 aa30.48■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 747.4 ms