RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 FAM189A2Q15884 450 aa12.99□□□□□ -0.33
VAPA-202ENST00000400000 UGT2A3Q6UWM9 527 aa12.99□□□□□ -0.33
VAPA-202ENST00000400000 OR1S1Q8NH92 325 aa12.99□□□□□ -0.33
VAPA-202ENST00000400000 DUOX1Q9NRD9 1551 aa12.99□□□□□ -0.33
VAPA-202ENST00000400000 SEC14L4Q9UDX3 406 aa12.99□□□□□ -0.33
VAPA-202ENST00000400000 SIT1Q9Y3P8 196 aa12.99□□□□□ -0.33
VAPA-202ENST00000400000 PRSS21Q9Y6M0 314 aa12.99□□□□□ -0.33
VAPA-202ENST00000400000 ADGRB2O60241 1585 aa12.99□□□□□ -0.33
VAPA-202ENST00000400000 RPL26P61254 145 aaKnown RBP12.99□□□□□ -0.33
VAPA-202ENST00000400000 KDM1BQ8NB78 822 aa12.99□□□□□ -0.33
VAPA-202ENST00000400000 SLC6A16Q9GZN6 736 aa12.99□□□□□ -0.33
VAPA-202ENST00000400000 MAB21L2Q9Y586 359 aa12.99□□□□□ -0.33
VAPA-202ENST00000400000 C3P01024 1663 aa12.99□□□□□ -0.33
VAPA-202ENST00000400000 SLIT3O75094 1523 aa12.99□□□□□ -0.33
VAPA-202ENST00000400000 SOCS6O14544 535 aa12.99□□□□□ -0.33
VAPA-202ENST00000400000 KDELR2P33947 212 aa12.99□□□□□ -0.33
VAPA-202ENST00000400000 ATP6AP1Q15904 470 aa12.99□□□□□ -0.33
VAPA-202ENST00000400000 ARHGAP11AQ6P4F7 1023 aa12.99□□□□□ -0.33
VAPA-202ENST00000400000 PGM2L1Q6PCE3 622 aa12.99□□□□□ -0.33
VAPA-202ENST00000400000 OR9A4Q8NGU2 314 aa12.99□□□□□ -0.33
VAPA-202ENST00000400000 DCUN1D4Q92564 292 aa12.99□□□□□ -0.33
VAPA-202ENST00000400000 SLC2A13Q96QE2 648 aa12.99□□□□□ -0.33
VAPA-202ENST00000400000 PPIL3Q9H2H8 161 aaKnown RBP12.99□□□□□ -0.33
VAPA-202ENST00000400000 C12orf49Q9H741 205 aa12.99□□□□□ -0.33
VAPA-202ENST00000400000 UBQLN2Q9UHD9 624 aa12.99□□□□□ -0.33
VAPA-202ENST00000400000 ITGB1BP2Q9UKP3 347 aa12.99□□□□□ -0.33
VAPA-202ENST00000400000 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.99□□□□□ -0.33
VAPA-202ENST00000400000 PDE4DIPQ5VU43 2346 aa12.98□□□□□ -0.33
VAPA-202ENST00000400000 XRN1Q8IZH2 1706 aaKnown RBP12.98□□□□□ -0.33
VAPA-202ENST00000400000 HIDE1A8MVS5 230 aa12.98□□□□□ -0.33
VAPA-202ENST00000400000 UBFD1O14562 309 aaKnown RBP12.98□□□□□ -0.33
VAPA-202ENST00000400000 ERVK-16P61578 105 aa12.98□□□□□ -0.33
VAPA-202ENST00000400000 GAB1Q13480 694 aa12.98□□□□□ -0.33
VAPA-202ENST00000400000 BEX5Q5H9J7 111 aa12.98□□□□□ -0.33
VAPA-202ENST00000400000 FOXQ1Q9C009 403 aa12.98□□□□□ -0.33
VAPA-202ENST00000400000 STK17BO94768 372 aa12.98□□□□□ -0.33
VAPA-202ENST00000400000 APBB3O95704 486 aa12.98□□□□□ -0.33
VAPA-202ENST00000400000 C9orf152Q5JTZ5 239 aa12.98□□□□□ -0.33
VAPA-202ENST00000400000 TMEM64Q6YI46 380 aa12.98□□□□□ -0.33
VAPA-202ENST00000400000 NEIL2Q969S2 332 aa12.98□□□□□ -0.33
VAPA-202ENST00000400000 FAM183AA6NL82 134 aa12.98□□□□□ -0.33
VAPA-202ENST00000400000 ANKRD30BLA7E2S9 258 aa12.98□□□□□ -0.33
VAPA-202ENST00000400000 H7C1C5 153 aa12.98□□□□□ -0.33
VAPA-202ENST00000400000 SULT1B1O43704 296 aa12.98□□□□□ -0.33
VAPA-202ENST00000400000 APOC3P02656 99 aa12.98□□□□□ -0.33
VAPA-202ENST00000400000 LCN6P62502 163 aa12.98□□□□□ -0.33
VAPA-202ENST00000400000 ADARB1P78563 741 aaKnown RBP12.98□□□□□ -0.33
VAPA-202ENST00000400000 ZNF829Q3KNS6 432 aaPredicted RBP12.98□□□□□ -0.33
VAPA-202ENST00000400000 VRK2Q86Y07 508 aa12.98□□□□□ -0.33
VAPA-202ENST00000400000 ZNF619Q8N2I2 560 aa12.98□□□□□ -0.33
VAPA-202ENST00000400000 OR6C1Q96RD1 312 aa12.98□□□□□ -0.33
VAPA-202ENST00000400000 MGLLQ99685 303 aa12.98□□□□□ -0.33
VAPA-202ENST00000400000 TWSG1Q9GZX9 223 aa12.98□□□□□ -0.33
VAPA-202ENST00000400000 CALHM2Q9HA72 323 aa12.98□□□□□ -0.33
VAPA-202ENST00000400000 HSFX1Q9UBD0 423 aa12.98□□□□□ -0.33
VAPA-202ENST00000400000 EDARQ9UNE0 448 aa12.98□□□□□ -0.33
VAPA-202ENST00000400000 H0YJX3 145 aa12.98□□□□□ -0.33
VAPA-202ENST00000400000 J3KTA2 159 aa12.98□□□□□ -0.33
VAPA-202ENST00000400000 ZNF44P15621 663 aa12.98□□□□□ -0.33
VAPA-202ENST00000400000 PPP5CP53041 499 aa12.98□□□□□ -0.33
VAPA-202ENST00000400000 DYRK1AQ13627 763 aa12.98□□□□□ -0.33
VAPA-202ENST00000400000 MBTPS1Q14703 1052 aa12.98□□□□□ -0.33
VAPA-202ENST00000400000 SPHARQ15513 63 aa12.98□□□□□ -0.33
VAPA-202ENST00000400000 ARHGAP12Q8IWW6 846 aa12.98□□□□□ -0.33
VAPA-202ENST00000400000 SLC5A8Q8N695 610 aa12.98□□□□□ -0.33
VAPA-202ENST00000400000 NDNFQ8TB73 568 aa12.98□□□□□ -0.33
VAPA-202ENST00000400000 C15orf40Q8WUR7 153 aa12.98□□□□□ -0.33
VAPA-202ENST00000400000 HERPUD2Q9BSE4 406 aa12.98□□□□□ -0.33
VAPA-202ENST00000400000 TMEM59LQ9UK28 342 aa12.98□□□□□ -0.33
VAPA-202ENST00000400000 POLHQ9Y253 713 aa12.98□□□□□ -0.33
VAPA-202ENST00000400000 COL1A1P02452 1464 aaPredicted RBP12.98□□□□□ -0.33
VAPA-202ENST00000400000 UGT2B10P36537 528 aa12.98□□□□□ -0.33
VAPA-202ENST00000400000 PTERQ96BW5 349 aa12.98□□□□□ -0.33
VAPA-202ENST00000400000 GPR37L1O60883 481 aa12.97□□□□□ -0.33
VAPA-202ENST00000400000 RAB3BP20337 219 aa12.97□□□□□ -0.33
VAPA-202ENST00000400000 RAB6AP20340 208 aa12.97□□□□□ -0.33
VAPA-202ENST00000400000 SNTB2Q13425 540 aaKnown RBP12.97□□□□□ -0.33
VAPA-202ENST00000400000 ATG9BQ674R7 924 aa12.97□□□□□ -0.33
VAPA-202ENST00000400000 TMEM205Q6UW68 189 aa12.97□□□□□ -0.33
VAPA-202ENST00000400000 MDGA1Q8NFP4 955 aa12.97□□□□□ -0.33
VAPA-202ENST00000400000 LIPHQ8WWY8 451 aa12.97□□□□□ -0.33
VAPA-202ENST00000400000 TESQ9UGI8 421 aaKnown RBP12.97□□□□□ -0.33
VAPA-202ENST00000400000 SPEF2Q9C093 1822 aa12.97□□□□□ -0.33
VAPA-202ENST00000400000 PTGESO14684 152 aa12.97□□□□□ -0.33
VAPA-202ENST00000400000 PRKAR1BP31321 381 aa12.97□□□□□ -0.33
VAPA-202ENST00000400000 SF3A2Q15428 464 aaKnown RBP12.97□□□□□ -0.33
VAPA-202ENST00000400000 VASNQ6EMK4 673 aa12.97□□□□□ -0.33
VAPA-202ENST00000400000 TUBA3EQ6PEY2 450 aa12.97□□□□□ -0.33
VAPA-202ENST00000400000 POC1BQ8TC44 478 aa12.97□□□□□ -0.33
VAPA-202ENST00000400000 H1FXQ92522 213 aaKnown RBP12.97□□□□□ -0.33
VAPA-202ENST00000400000 FAXDC2Q96IV6 333 aa12.97□□□□□ -0.33
VAPA-202ENST00000400000 WWTR1Q9GZV5 400 aa12.97□□□□□ -0.33
VAPA-202ENST00000400000 ENKD1Q9H0I2 346 aa12.97□□□□□ -0.33
VAPA-202ENST00000400000 NMNAT1Q9HAN9 279 aaPredicted RBP12.97□□□□□ -0.33
VAPA-202ENST00000400000 GNB4Q9HAV0 340 aa12.97□□□□□ -0.33
VAPA-202ENST00000400000 NLKQ9UBE8 527 aa12.97□□□□□ -0.33
VAPA-202ENST00000400000 NUMBLQ9Y6R0 609 aa12.97□□□□□ -0.33
VAPA-202ENST00000400000 F13BP05160 661 aa12.97□□□□□ -0.33
VAPA-202ENST00000400000 UBL4AP11441 157 aa12.97□□□□□ -0.33
VAPA-202ENST00000400000 HOXA11P31270 313 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms