RNA–Protein interactions for RNA: ENST00000399613.1

PAN3-202, Transcript of poly(A) specific ribonuclease subunit PAN3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PAN3, Length 4,940 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAN3-202ENST00000399613 PLAUP00749 431 aa4.29□□□□□ -1.72
PAN3-202ENST00000399613 ESRRAP11474 423 aaPredicted RBP4.29□□□□□ -1.72
PAN3-202ENST00000399613 PRKCAP17252 672 aa4.29□□□□□ -1.72
PAN3-202ENST00000399613 OR3A2P47893 321 aa4.29□□□□□ -1.72
PAN3-202ENST00000399613 SLC25A3Q00325 362 aa4.29□□□□□ -1.72
PAN3-202ENST00000399613 ZNF763Q0D2J5 394 aa4.29□□□□□ -1.72
PAN3-202ENST00000399613 HIST2H2ACQ16777 129 aaPredicted RBP4.29□□□□□ -1.72
PAN3-202ENST00000399613 HIST2H2AA3Q6FI13 130 aa4.29□□□□□ -1.72
PAN3-202ENST00000399613 B3GLCTQ6Y288 498 aa4.29□□□□□ -1.72
PAN3-202ENST00000399613 TRMT10CQ7L0Y3 403 aaKnown RBP4.29□□□□□ -1.72
PAN3-202ENST00000399613 SFXN5Q8TD22 340 aa4.29□□□□□ -1.72
PAN3-202ENST00000399613 TMEM45BQ96B21 275 aa4.29□□□□□ -1.72
PAN3-202ENST00000399613 ZNF845Q96IR2 970 aaPredicted RBP4.29□□□□□ -1.72
PAN3-202ENST00000399613 SORT1Q99523 831 aa4.29□□□□□ -1.72
PAN3-202ENST00000399613 RBM24Q9BX46 236 aaKnown RBP4.29□□□□□ -1.72
PAN3-202ENST00000399613 ACTR8Q9H981 624 aa4.29□□□□□ -1.72
PAN3-202ENST00000399613 SERHLQ9NQF3 203 aa4.29□□□□□ -1.72
PAN3-202ENST00000399613 KLHL13Q9P2N7 655 aa4.29□□□□□ -1.72
PAN3-202ENST00000399613 SLC25A15Q9Y619 301 aa4.29□□□□□ -1.72
PAN3-202ENST00000399613 RYR3Q15413 4870 aa4.29□□□□□ -1.72
PAN3-202ENST00000399613 NBASA2RRP1 2371 aa4.29□□□□□ -1.72
PAN3-202ENST00000399613 CREBBPQ92793 2442 aa4.29□□□□□ -1.72
PAN3-202ENST00000399613 A0A1W2PPM1 405 aa4.29□□□□□ -1.72
PAN3-202ENST00000399613 TP53I11O14683 189 aa4.29□□□□□ -1.72
PAN3-202ENST00000399613 SMAD9O15198 467 aaKnown RBP4.29□□□□□ -1.72
PAN3-202ENST00000399613 NME6O75414 186 aaPredicted RBP4.29□□□□□ -1.72
PAN3-202ENST00000399613 ERN1O75460 977 aaKnown RBP4.29□□□□□ -1.72
PAN3-202ENST00000399613 SOD3P08294 240 aa4.29□□□□□ -1.72
PAN3-202ENST00000399613 PYGBP11216 843 aa4.29□□□□□ -1.72
PAN3-202ENST00000399613 ATP5F1P24539 256 aaPredicted RBP4.29□□□□□ -1.72
PAN3-202ENST00000399613 TMED10P49755 219 aaKnown RBP4.29□□□□□ -1.72
PAN3-202ENST00000399613 ZNF133P52736 654 aaPredicted RBP4.29□□□□□ -1.72
PAN3-202ENST00000399613 WHAMMP3Q1A5X7 153 aa4.29□□□□□ -1.72
PAN3-202ENST00000399613 MROH9Q5TGP6 573 aa4.29□□□□□ -1.72
PAN3-202ENST00000399613 OR2A2Q6IF42 318 aa4.29□□□□□ -1.72
PAN3-202ENST00000399613 NOXRED1Q6NXP6 359 aa4.29□□□□□ -1.72
PAN3-202ENST00000399613 HIPK1Q86Z02 1210 aa4.29□□□□□ -1.72
PAN3-202ENST00000399613 DOHHQ9BU89 302 aa4.29□□□□□ -1.72
PAN3-202ENST00000399613 FREM1Q5H8C1 2179 aa4.29□□□□□ -1.72
PAN3-202ENST00000399613 ARPC4-TTLL3A0A0A6YYG9 625 aa4.29□□□□□ -1.72
PAN3-202ENST00000399613 A0A1W2PRB8 838 aa4.29□□□□□ -1.72
PAN3-202ENST00000399613 DPRXA6NFQ7 191 aa4.29□□□□□ -1.72
PAN3-202ENST00000399613 KIAA0513O60268 411 aa4.29□□□□□ -1.72
PAN3-202ENST00000399613 NPHS1O60500 1241 aa4.29□□□□□ -1.72
PAN3-202ENST00000399613 SHBGP04278 402 aa4.29□□□□□ -1.72
PAN3-202ENST00000399613 GIFP27352 417 aa4.29□□□□□ -1.72
PAN3-202ENST00000399613 COMPP49747 757 aaPredicted RBP4.29□□□□□ -1.72
PAN3-202ENST00000399613 MRPS35P82673 323 aaKnown RBP4.29□□□□□ -1.72
PAN3-202ENST00000399613 ZNF117Q03924 483 aa4.29□□□□□ -1.72
PAN3-202ENST00000399613 LOXL1Q08397 574 aaPredicted RBP4.29□□□□□ -1.72
PAN3-202ENST00000399613 SNTB1Q13884 538 aaKnown RBP4.29□□□□□ -1.72
PAN3-202ENST00000399613 DUSP5Q16690 384 aa4.29□□□□□ -1.72
PAN3-202ENST00000399613 RFTN2Q52LD8 501 aaPredicted RBP4.29□□□□□ -1.72
PAN3-202ENST00000399613 YRDCQ86U90 279 aaKnown RBP4.29□□□□□ -1.72
PAN3-202ENST00000399613 SNX31Q8N9S9 440 aa4.29□□□□□ -1.72
PAN3-202ENST00000399613 RAB17Q9H0T7 212 aa4.29□□□□□ -1.72
PAN3-202ENST00000399613 SSU72Q9NP77 194 aaKnown RBP4.29□□□□□ -1.72
PAN3-202ENST00000399613 MED17Q9NVC6 651 aa4.29□□□□□ -1.72
PAN3-202ENST00000399613 GPR52Q9Y2T5 361 aa4.29□□□□□ -1.72
PAN3-202ENST00000399613 SETD2Q9BYW2 2564 aaPredicted RBP4.29□□□□□ -1.72
PAN3-202ENST00000399613 TRBV5-3A0A0A0MS03 114 aa4.28□□□□□ -1.72
PAN3-202ENST00000399613 LOC102725191A0A1B0GVB3 256 aa4.28□□□□□ -1.72
PAN3-202ENST00000399613 UTS2O95399 124 aa4.28□□□□□ -1.72
PAN3-202ENST00000399613 HSPA4LO95757 839 aa4.28□□□□□ -1.72
PAN3-202ENST00000399613 IGHV4-39P01824 125 aa4.28□□□□□ -1.72
PAN3-202ENST00000399613 DNASE1P24855 282 aa4.28□□□□□ -1.72
PAN3-202ENST00000399613 PIK3R1P27986 724 aa4.28□□□□□ -1.72
PAN3-202ENST00000399613 SLC29A2Q14542 456 aa4.28□□□□□ -1.72
PAN3-202ENST00000399613 SF3B4Q15427 424 aaKnown RBP eCLIP4.28□□□□□ -1.724e-6■□□□□ 10.6
PAN3-202ENST00000399613 SAXO2Q658L1 398 aa4.28□□□□□ -1.72
PAN3-202ENST00000399613 CDC73Q6P1J9 531 aa4.28□□□□□ -1.72
PAN3-202ENST00000399613 LINC00114Q6XXX2 140 aa4.28□□□□□ -1.72
PAN3-202ENST00000399613 LINGO2Q7L985 606 aa4.28□□□□□ -1.72
PAN3-202ENST00000399613 MREGQ8N565 214 aa4.28□□□□□ -1.72
PAN3-202ENST00000399613 OR8J2Q8NGG1 315 aa4.28□□□□□ -1.72
PAN3-202ENST00000399613 OR5M3Q8NGP4 307 aa4.28□□□□□ -1.72
PAN3-202ENST00000399613 MAGEE2Q8TD90 523 aaPredicted RBP4.28□□□□□ -1.72
PAN3-202ENST00000399613 DOK4Q8TEW6 326 aa4.28□□□□□ -1.72
PAN3-202ENST00000399613 RBM18Q96H35 190 aaKnown RBP4.28□□□□□ -1.72
PAN3-202ENST00000399613 OPN3Q9H1Y3 402 aaPredicted RBP4.28□□□□□ -1.72
PAN3-202ENST00000399613 PIGUQ9H490 435 aa4.28□□□□□ -1.72
PAN3-202ENST00000399613 TAS2R10Q9NYW0 307 aa4.28□□□□□ -1.72
PAN3-202ENST00000399613 PKD1L1Q8TDX9 2849 aa4.28□□□□□ -1.72
PAN3-202ENST00000399613 FTCDNL1E5RQL4 147 aa4.28□□□□□ -1.72
PAN3-202ENST00000399613 RPL36A-HNRNPH2H7BZ11 118 aa4.28□□□□□ -1.72
PAN3-202ENST00000399613 DNPH1O43598 174 aa4.28□□□□□ -1.72
PAN3-202ENST00000399613 ZNF432O94892 652 aa4.28□□□□□ -1.72
PAN3-202ENST00000399613 TUBBP07437 444 aa4.28□□□□□ -1.72
PAN3-202ENST00000399613 SNRPB2P08579 225 aaKnown RBP4.28□□□□□ -1.72
PAN3-202ENST00000399613 BMP2P12643 396 aa4.28□□□□□ -1.72
PAN3-202ENST00000399613 GDF1P27539 372 aa4.28□□□□□ -1.72
PAN3-202ENST00000399613 PRIM2P49643 509 aa4.28□□□□□ -1.72
PAN3-202ENST00000399613 STARP49675 285 aa4.28□□□□□ -1.72
PAN3-202ENST00000399613 CPSF6Q16630 551 aaKnown RBP eCLIP4.28□□□□□ -1.72
PAN3-202ENST00000399613 ARHGAP11BQ3KRB8 267 aa4.28□□□□□ -1.72
PAN3-202ENST00000399613 CPTPQ5TA50 214 aa4.28□□□□□ -1.72
PAN3-202ENST00000399613 NUFIP2Q7Z417 695 aaKnown RBP4.28□□□□□ -1.72
PAN3-202ENST00000399613 GRAMD2AQ8IUY3 354 aa4.28□□□□□ -1.72
PAN3-202ENST00000399613 SAMD14Q8IZD0 417 aaPredicted RBP4.28□□□□□ -1.72
PAN3-202ENST00000399613 CDKL2Q92772 493 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms