RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 GRIN2CQ14957 1233 aa13.08□□□□□ -0.32
APOB-202ENST00000399256 FAM129CQ86XR2 697 aa13.08□□□□□ -0.32
APOB-202ENST00000399256 NKAIN4Q8IVV8 208 aa13.08□□□□□ -0.32
APOB-202ENST00000399256 TMEM99Q8N816 258 aa13.08□□□□□ -0.32
APOB-202ENST00000399256 BBS10Q8TAM1 723 aa13.08□□□□□ -0.32
APOB-202ENST00000399256 PIGXQ8TBF5 258 aa13.08□□□□□ -0.32
APOB-202ENST00000399256 CYB5D2Q8WUJ1 264 aa13.08□□□□□ -0.32
APOB-202ENST00000399256 ALG8Q9BVK2 526 aa13.08□□□□□ -0.32
APOB-202ENST00000399256 RDH8Q9NYR8 311 aa13.08□□□□□ -0.32
APOB-202ENST00000399256 NKIRAS2Q9NYR9 191 aa13.08□□□□□ -0.32
APOB-202ENST00000399256 KIF26AQ9ULI4 1882 aaPredicted RBP13.08□□□□□ -0.32
APOB-202ENST00000399256 MEIKINA0A087WXM9 373 aa13.08□□□□□ -0.32
APOB-202ENST00000399256 A0A0B4J203 849 aa13.08□□□□□ -0.32
APOB-202ENST00000399256 NEDD8-MDP1E9PL57 170 aa13.08□□□□□ -0.32
APOB-202ENST00000399256 STATHP02808 62 aa13.08□□□□□ -0.32
APOB-202ENST00000399256 SERPIND1P05546 499 aa13.08□□□□□ -0.32
APOB-202ENST00000399256 DRD5P21918 477 aa13.08□□□□□ -0.32
APOB-202ENST00000399256 TRHRP34981 398 aaPredicted RBP13.08□□□□□ -0.32
APOB-202ENST00000399256 AHRP35869 848 aa13.08□□□□□ -0.32
APOB-202ENST00000399256 STXBP1P61764 594 aaKnown RBP13.08□□□□□ -0.32
APOB-202ENST00000399256 GSG1Q2KHT4 349 aa13.08□□□□□ -0.32
APOB-202ENST00000399256 PGGHGQ32M88 737 aa13.08□□□□□ -0.32
APOB-202ENST00000399256 PYHIN1Q6K0P9 492 aa13.08□□□□□ -0.32
APOB-202ENST00000399256 GAREM2Q75VX8 874 aa13.08□□□□□ -0.32
APOB-202ENST00000399256 VRK2Q86Y07 508 aa13.08□□□□□ -0.32
APOB-202ENST00000399256 TMEM25Q86YD3 366 aa13.08□□□□□ -0.32
APOB-202ENST00000399256 MS4A15Q8N5U1 240 aa13.08□□□□□ -0.32
APOB-202ENST00000399256 ZG16BQ96DA0 208 aa13.08□□□□□ -0.32
APOB-202ENST00000399256 PPP1R16AQ96I34 528 aa13.08□□□□□ -0.32
APOB-202ENST00000399256 SPATA5L1Q9BVQ7 753 aa13.08□□□□□ -0.32
APOB-202ENST00000399256 MS4A8Q9BY19 250 aa13.08□□□□□ -0.32
APOB-202ENST00000399256 SPRTNQ9H040 489 aaPredicted RBP13.08□□□□□ -0.32
APOB-202ENST00000399256 PTTG3PQ9NZH4 202 aa13.08□□□□□ -0.32
APOB-202ENST00000399256 K7ESM1 405 aa13.07□□□□□ -0.32
APOB-202ENST00000399256 PI15O43692 258 aa13.07□□□□□ -0.32
APOB-202ENST00000399256 CTSLP07711 333 aa13.07□□□□□ -0.32
APOB-202ENST00000399256 H2AFB2P0C5Z0 115 aa13.07□□□□□ -0.32
APOB-202ENST00000399256 FRKP42685 505 aaPredicted RBP13.07□□□□□ -0.32
APOB-202ENST00000399256 NCBP2P52298 156 aaKnown RBP eCLIP13.07□□□□□ -0.321e-21■■■□□ 16.5
APOB-202ENST00000399256 SLC3A1Q07837 685 aa13.07□□□□□ -0.32
APOB-202ENST00000399256 IKZF1Q13422 519 aa13.07□□□□□ -0.32
APOB-202ENST00000399256 TRAM2Q15035 370 aa13.07□□□□□ -0.32
APOB-202ENST00000399256 ZNF658BQ4V348 819 aaPredicted RBP13.07□□□□□ -0.32
APOB-202ENST00000399256 PLBD1Q6P4A8 553 aa13.07□□□□□ -0.32
APOB-202ENST00000399256 ESPNLQ6ZVH7 1005 aa13.07□□□□□ -0.32
APOB-202ENST00000399256 PRSS42Q7Z5A4 293 aa13.07□□□□□ -0.32
APOB-202ENST00000399256 FTMTQ8N4E7 242 aa13.07□□□□□ -0.32
APOB-202ENST00000399256 TET1Q8NFU7 2136 aa13.07□□□□□ -0.32
APOB-202ENST00000399256 OR5AR1Q8NGP9 310 aa13.07□□□□□ -0.32
APOB-202ENST00000399256 OR2T35Q8NGX2 323 aa13.07□□□□□ -0.32
APOB-202ENST00000399256 HGDQ93099 445 aa13.07□□□□□ -0.32
APOB-202ENST00000399256 YIPF5Q969M3 257 aa13.07□□□□□ -0.32
APOB-202ENST00000399256 PMEPA1Q969W9 287 aa13.07□□□□□ -0.32
APOB-202ENST00000399256 ARMC5Q96C12 935 aa13.07□□□□□ -0.32
APOB-202ENST00000399256 ZSWIM3Q96MP5 696 aa13.07□□□□□ -0.32
APOB-202ENST00000399256 BABAM2Q9NXR7 383 aa13.07□□□□□ -0.32
APOB-202ENST00000399256 NLGN3Q9NZ94 848 aa13.07□□□□□ -0.32
APOB-202ENST00000399256 KCMF1Q9P0J7 381 aa13.07□□□□□ -0.32
APOB-202ENST00000399256 ASF1AQ9Y294 204 aa13.07□□□□□ -0.32
APOB-202ENST00000399256 PRKAB1Q9Y478 270 aa13.07□□□□□ -0.32
APOB-202ENST00000399256 E9PI62 339 aa13.07□□□□□ -0.32
APOB-202ENST00000399256 LEFTY2O00292 366 aa13.07□□□□□ -0.32
APOB-202ENST00000399256 SULT1A3P0DMM9 295 aa13.07□□□□□ -0.32
APOB-202ENST00000399256 SULT1A4P0DMN0 295 aa13.07□□□□□ -0.32
APOB-202ENST00000399256 PSMB5P28074 263 aa13.07□□□□□ -0.32
APOB-202ENST00000399256 SELENOPP49908 381 aa13.07□□□□□ -0.32
APOB-202ENST00000399256 KHKP50053 298 aa13.07□□□□□ -0.32
APOB-202ENST00000399256 ZNF750Q32MQ0 723 aa13.07□□□□□ -0.32
APOB-202ENST00000399256 ZNF311Q5JNZ3 666 aa13.07□□□□□ -0.32
APOB-202ENST00000399256 SLC39A5Q6ZMH5 540 aa13.07□□□□□ -0.32
APOB-202ENST00000399256 NRMQ8IXM6 262 aa13.07□□□□□ -0.32
APOB-202ENST00000399256 ESX1Q8N693 406 aa13.07□□□□□ -0.32
APOB-202ENST00000399256 SUN3Q8TAQ9 357 aa13.07□□□□□ -0.32
APOB-202ENST00000399256 OSTF1Q92882 214 aa13.07□□□□□ -0.32
APOB-202ENST00000399256 RBPMSQ93062 196 aaKnown RBP13.07□□□□□ -0.32
APOB-202ENST00000399256 C16orf58Q96GQ5 468 aa13.07□□□□□ -0.32
APOB-202ENST00000399256 IGSF21Q96ID5 467 aa13.07□□□□□ -0.32
APOB-202ENST00000399256 SLC13A4Q9UKG4 626 aa13.07□□□□□ -0.32
APOB-202ENST00000399256 NFATC1O95644 943 aa13.06□□□□□ -0.32
APOB-202ENST00000399256 ANKRD34CP0C6C1 535 aa13.06□□□□□ -0.32
APOB-202ENST00000399256 RNF144AP50876 292 aaPredicted RBP13.06□□□□□ -0.32
APOB-202ENST00000399256 LBX1P52954 281 aa13.06□□□□□ -0.32
APOB-202ENST00000399256 ZP1P60852 638 aa13.06□□□□□ -0.32
APOB-202ENST00000399256 CXXC5Q7LFL8 322 aaKnown RBP13.06□□□□□ -0.32
APOB-202ENST00000399256 ANKRD33Q7Z3H0 272 aa13.06□□□□□ -0.32
APOB-202ENST00000399256 CEACAM19Q7Z692 300 aa13.06□□□□□ -0.32
APOB-202ENST00000399256 ZNF527Q8NB42 609 aa13.06□□□□□ -0.32
APOB-202ENST00000399256 ADAMTS14Q8WXS8 1223 aa13.06□□□□□ -0.32
APOB-202ENST00000399256 SAMD8Q96LT4 415 aa13.06□□□□□ -0.32
APOB-202ENST00000399256 AMDHD1Q96NU7 426 aa13.06□□□□□ -0.32
APOB-202ENST00000399256 TEX12Q9BXU0 123 aa13.06□□□□□ -0.32
APOB-202ENST00000399256 CHIAQ9BZP6 476 aa13.06□□□□□ -0.32
APOB-202ENST00000399256 METTL17Q9H7H0 456 aaPredicted RBP13.06□□□□□ -0.32
APOB-202ENST00000399256 MARK1Q9P0L2 795 aa13.06□□□□□ -0.32
APOB-202ENST00000399256 A0A1W2PPL8 197 aa13.06□□□□□ -0.32
APOB-202ENST00000399256 ATP6V1G2-DDX39BF2Z307 99 aa13.06□□□□□ -0.32
APOB-202ENST00000399256 M0R233 179 aa13.06□□□□□ -0.32
APOB-202ENST00000399256 ZNF593O00488 134 aaPredicted RBP13.06□□□□□ -0.32
APOB-202ENST00000399256 ERAL1O75616 437 aaKnown RBP13.06□□□□□ -0.32
APOB-202ENST00000399256 FGBP02675 491 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms