RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 HOXC5Q00444 222 aa13.37□□□□□ -0.27
PCDHGA11-201ENST00000398587 EXOSC7Q15024 291 aaKnown RBP13.37□□□□□ -0.27
PCDHGA11-201ENST00000398587 FAM69BQ5VUD6 431 aa13.37□□□□□ -0.27
PCDHGA11-201ENST00000398587 METRNLQ641Q3 311 aa13.37□□□□□ -0.27
PCDHGA11-201ENST00000398587 ZC3H14Q6PJT7 736 aaKnown RBP13.37□□□□□ -0.27
PCDHGA11-201ENST00000398587 CCBE1Q6UXH8 406 aaPredicted RBP13.37□□□□□ -0.27
PCDHGA11-201ENST00000398587 BPIFA2Q96DR5 249 aa13.37□□□□□ -0.27
PCDHGA11-201ENST00000398587 CLCC1Q96S66 551 aa13.37□□□□□ -0.27
PCDHGA11-201ENST00000398587 TRPV4Q9HBA0 871 aa13.37□□□□□ -0.27
PCDHGA11-201ENST00000398587 PCDHB16Q9NRJ7 776 aa13.37□□□□□ -0.27
PCDHGA11-201ENST00000398587 TARM1B6A8C7 271 aa13.37□□□□□ -0.27
PCDHGA11-201ENST00000398587 RFXAPO00287 272 aa13.37□□□□□ -0.27
PCDHGA11-201ENST00000398587 RBBP9O75884 186 aa13.37□□□□□ -0.27
PCDHGA11-201ENST00000398587 PEX11BO96011 259 aa13.37□□□□□ -0.27
PCDHGA11-201ENST00000398587 SYPP08247 313 aa13.37□□□□□ -0.27
PCDHGA11-201ENST00000398587 ACPPP15309 386 aa13.37□□□□□ -0.27
PCDHGA11-201ENST00000398587 UGT2B7P16662 529 aa13.37□□□□□ -0.27
PCDHGA11-201ENST00000398587 CD40LGP29965 261 aa13.37□□□□□ -0.27
PCDHGA11-201ENST00000398587 DPTQ07507 201 aa13.37□□□□□ -0.27
PCDHGA11-201ENST00000398587 POLE4Q9NR33 117 aa13.37□□□□□ -0.27
PCDHGA11-201ENST00000398587 TMA7Q9Y2S6 64 aaKnown RBP13.37□□□□□ -0.27
PCDHGA11-201ENST00000398587 TRBV5-4A0A0C4DH59 114 aa13.36□□□□□ -0.27
PCDHGA11-201ENST00000398587 M0R129 80 aa13.36□□□□□ -0.27
PCDHGA11-201ENST00000398587 CSNK1G2P78368 415 aa13.36□□□□□ -0.27
PCDHGA11-201ENST00000398587 TNFRSF17Q02223 184 aa13.36□□□□□ -0.27
PCDHGA11-201ENST00000398587 CHRNEQ04844 493 aa13.36□□□□□ -0.27
PCDHGA11-201ENST00000398587 SGCAQ16586 387 aa13.36□□□□□ -0.27
PCDHGA11-201ENST00000398587 ABCA11PQ4W5N1 156 aa13.36□□□□□ -0.27
PCDHGA11-201ENST00000398587 ULK3Q6PHR2 472 aa13.36□□□□□ -0.27
PCDHGA11-201ENST00000398587 XKRXQ6PP77 449 aa13.36□□□□□ -0.27
PCDHGA11-201ENST00000398587 BHLHA9Q7RTU4 235 aa13.36□□□□□ -0.27
PCDHGA11-201ENST00000398587 ZER1Q7Z7L7 766 aa13.36□□□□□ -0.27
PCDHGA11-201ENST00000398587 TMEM151AQ8N4L1 468 aa13.36□□□□□ -0.27
PCDHGA11-201ENST00000398587 OR9A4Q8NGU2 314 aa13.36□□□□□ -0.27
PCDHGA11-201ENST00000398587 CREB3L1Q96BA8 519 aa13.36□□□□□ -0.27
PCDHGA11-201ENST00000398587 TBC1D20Q96BZ9 403 aa13.36□□□□□ -0.27
PCDHGA11-201ENST00000398587 NEURL3Q96EH8 262 aa13.36□□□□□ -0.27
PCDHGA11-201ENST00000398587 C1QTNF2Q9BXJ5 285 aa13.36□□□□□ -0.27
PCDHGA11-201ENST00000398587 CXorf36Q9H7Y0 433 aa13.36□□□□□ -0.27
PCDHGA11-201ENST00000398587 ZNF69Q9UC07 566 aa13.36□□□□□ -0.27
PCDHGA11-201ENST00000398587 TMEM202A6NGA9 273 aa13.36□□□□□ -0.27
PCDHGA11-201ENST00000398587 RAB3BP20337 219 aa13.36□□□□□ -0.27
PCDHGA11-201ENST00000398587 FRKP42685 505 aaPredicted RBP13.36□□□□□ -0.27
PCDHGA11-201ENST00000398587 SLC6A12P48065 614 aa13.36□□□□□ -0.27
PCDHGA11-201ENST00000398587 GNG2P59768 71 aa13.36□□□□□ -0.27
PCDHGA11-201ENST00000398587 EIF5AP63241 154 aaKnown RBP13.36□□□□□ -0.27
PCDHGA11-201ENST00000398587 CCNJQ5T5M9 372 aa13.36□□□□□ -0.27
PCDHGA11-201ENST00000398587 ZNF613Q6PF04 617 aa13.36□□□□□ -0.27
PCDHGA11-201ENST00000398587 WDR53Q7Z5U6 358 aaPredicted RBP13.36□□□□□ -0.27
PCDHGA11-201ENST00000398587 VRK2Q86Y07 508 aa13.36□□□□□ -0.27
PCDHGA11-201ENST00000398587 ANKRD13BQ86YJ7 626 aa13.36□□□□□ -0.27
PCDHGA11-201ENST00000398587 OR1F2PQ96R84 312 aa13.36□□□□□ -0.27
PCDHGA11-201ENST00000398587 CRB3Q9BUF7 120 aa13.36□□□□□ -0.27
PCDHGA11-201ENST00000398587 ALG8Q9BVK2 526 aa13.36□□□□□ -0.27
PCDHGA11-201ENST00000398587 ABCG5Q9H222 651 aa13.36□□□□□ -0.27
PCDHGA11-201ENST00000398587 PRRT4C9JH25 899 aa13.36□□□□□ -0.27
PCDHGA11-201ENST00000398587 EEF1E1O43324 174 aaKnown RBP13.36□□□□□ -0.27
PCDHGA11-201ENST00000398587 OR2T1O43869 369 aa13.36□□□□□ -0.27
PCDHGA11-201ENST00000398587 ATP6V1G1O75348 118 aa13.36□□□□□ -0.27
PCDHGA11-201ENST00000398587 UBL4AP11441 157 aa13.36□□□□□ -0.27
PCDHGA11-201ENST00000398587 GRPRP30550 384 aa13.36□□□□□ -0.27
PCDHGA11-201ENST00000398587 HOXC8P31273 242 aa13.36□□□□□ -0.27
PCDHGA11-201ENST00000398587 POLR2IP36954 125 aaKnown RBP13.36□□□□□ -0.27
PCDHGA11-201ENST00000398587 EMP2P54851 167 aa13.36□□□□□ -0.27
PCDHGA11-201ENST00000398587 AKIRIN2Q53H80 203 aa13.36□□□□□ -0.27
PCDHGA11-201ENST00000398587 TMEM69Q5SWH9 247 aa13.36□□□□□ -0.27
PCDHGA11-201ENST00000398587 FAM71E1Q6IPT2 247 aa13.36□□□□□ -0.27
PCDHGA11-201ENST00000398587 DLEU7Q6UYE1 221 aa13.36□□□□□ -0.27
PCDHGA11-201ENST00000398587 RASSF6Q6ZTQ3 369 aa13.36□□□□□ -0.27
PCDHGA11-201ENST00000398587 B3GNT8Q7Z7M8 397 aa13.36□□□□□ -0.27
PCDHGA11-201ENST00000398587 OR51L1Q8NGJ5 315 aa13.36□□□□□ -0.27
PCDHGA11-201ENST00000398587 TRIM43Q96BQ3 446 aaPredicted RBP13.36□□□□□ -0.27
PCDHGA11-201ENST00000398587 TM4SF18Q96CE8 201 aa13.36□□□□□ -0.27
PCDHGA11-201ENST00000398587 LDAHQ9H6V9 325 aa13.36□□□□□ -0.27
PCDHGA11-201ENST00000398587 GPN2Q9H9Y4 310 aaPredicted RBP13.36□□□□□ -0.27
PCDHGA11-201ENST00000398587 USP36Q9P275 1121 aaKnown RBP13.36□□□□□ -0.27
PCDHGA11-201ENST00000398587 ZNF443Q9Y2A4 671 aaPredicted RBP13.36□□□□□ -0.27
PCDHGA11-201ENST00000398587 VAMP1P23763 118 aa13.36□□□□□ -0.27
PCDHGA11-201ENST00000398587 CTGFP29279 349 aa13.36□□□□□ -0.27
PCDHGA11-201ENST00000398587 SCN1AP35498 2009 aa13.36□□□□□ -0.27
PCDHGA11-201ENST00000398587 PDX1P52945 283 aa13.36□□□□□ -0.27
PCDHGA11-201ENST00000398587 KCNJ10P78508 379 aa13.36□□□□□ -0.27
PCDHGA11-201ENST00000398587 DUSP6Q16828 381 aa13.36□□□□□ -0.27
PCDHGA11-201ENST00000398587 ALG10Q5BKT4 473 aa13.36□□□□□ -0.27
PCDHGA11-201ENST00000398587 ENTPD8Q5MY95 495 aa13.36□□□□□ -0.27
PCDHGA11-201ENST00000398587 TMED4Q7Z7H5 227 aa13.36□□□□□ -0.27
PCDHGA11-201ENST00000398587 NAA11Q9BSU3 229 aaPredicted RBP13.36□□□□□ -0.27
PCDHGA11-201ENST00000398587 OR52D1Q9H346 318 aa13.36□□□□□ -0.27
PCDHGA11-201ENST00000398587 ERVK13-1Q9NX77 482 aa13.36□□□□□ -0.27
PCDHGA11-201ENST00000398587 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.35□□□□□ -0.27
PCDHGA11-201ENST00000398587 SBK3P0C264 359 aa13.35□□□□□ -0.27
PCDHGA11-201ENST00000398587 C21orf33P30042 268 aaPredicted RBP13.35□□□□□ -0.27
PCDHGA11-201ENST00000398587 RAB2AP61019 212 aa13.35□□□□□ -0.27
PCDHGA11-201ENST00000398587 RPS15P62841 145 aaKnown RBP13.35□□□□□ -0.27
PCDHGA11-201ENST00000398587 NHSL2Q5HYW2 709 aa13.35□□□□□ -0.27
PCDHGA11-201ENST00000398587 TMEM184AQ6ZMB5 413 aa13.35□□□□□ -0.27
PCDHGA11-201ENST00000398587 PLCZ1Q86YW0 608 aa13.35□□□□□ -0.27
PCDHGA11-201ENST00000398587 LMF2Q9BU23 707 aaKnown RBP13.35□□□□□ -0.27
PCDHGA11-201ENST00000398587 TMEM38AQ9H6F2 299 aa13.35□□□□□ -0.27
PCDHGA11-201ENST00000398587 IER3IP1Q9Y5U9 82 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms