RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 ZMYND19Q96E35 227 aaPredicted RBP10.7□□□□□ -0.7
TTC28-201ENST00000397906 MYH15Q9Y2K3 1946 aa10.7□□□□□ -0.7
TTC28-201ENST00000397906 A8MV72 311 aaPredicted RBP10.7□□□□□ -0.7
TTC28-201ENST00000397906 DIRAS3O95661 229 aa10.7□□□□□ -0.7
TTC28-201ENST00000397906 C19orf47Q8N9M1 422 aaKnown RBP10.7□□□□□ -0.7
TTC28-201ENST00000397906 PBX4Q9BYU1 374 aa10.7□□□□□ -0.7
TTC28-201ENST00000397906 LIN28AQ9H9Z2 209 aaKnown RBP10.7□□□□□ -0.7
TTC28-201ENST00000397906 CCR7P32248 378 aa10.7□□□□□ -0.7
TTC28-201ENST00000397906 CSNK1A1P48729 337 aa10.7□□□□□ -0.7
TTC28-201ENST00000397906 ZNF791Q3KP31 576 aaPredicted RBP10.7□□□□□ -0.7
TTC28-201ENST00000397906 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.7□□□□□ -0.7
TTC28-201ENST00000397906 HES5Q5TA89 166 aa10.7□□□□□ -0.7
TTC28-201ENST00000397906 PDSS2Q86YH6 399 aa10.7□□□□□ -0.7
TTC28-201ENST00000397906 IL1F10Q8WWZ1 152 aa10.7□□□□□ -0.7
TTC28-201ENST00000397906 PGAP3Q96FM1 320 aaPredicted RBP10.7□□□□□ -0.7
TTC28-201ENST00000397906 POLHQ9Y253 713 aa10.7□□□□□ -0.7
TTC28-201ENST00000397906 GYPBP06028 91 aa10.7□□□□□ -0.7
TTC28-201ENST00000397906 UGT2B7P16662 529 aa10.7□□□□□ -0.7
TTC28-201ENST00000397906 HTRA2O43464 458 aaPredicted RBP10.7□□□□□ -0.7
TTC28-201ENST00000397906 DBHP09172 617 aa10.7□□□□□ -0.7
TTC28-201ENST00000397906 GTDC1Q4AE62 458 aa10.7□□□□□ -0.7
TTC28-201ENST00000397906 INSM2Q96T92 566 aaPredicted RBP10.7□□□□□ -0.7
TTC28-201ENST00000397906 MED16Q9Y2X0 877 aa10.7□□□□□ -0.7
TTC28-201ENST00000397906 SHISA7A6NL88 538 aa10.7□□□□□ -0.7
TTC28-201ENST00000397906 DLGAP1O14490 977 aa10.7□□□□□ -0.7
TTC28-201ENST00000397906 SPATS1Q496A3 300 aa10.7□□□□□ -0.7
TTC28-201ENST00000397906 FAM76BQ5HYJ3 339 aa10.7□□□□□ -0.7
TTC28-201ENST00000397906 ZNF808Q8N4W9 903 aaPredicted RBP10.7□□□□□ -0.7
TTC28-201ENST00000397906 LRRC42Q9Y546 428 aa10.7□□□□□ -0.7
TTC28-201ENST00000397906 PCDHGB6Q9Y5F9 930 aa10.7□□□□□ -0.7
TTC28-201ENST00000397906 RBBP9O75884 186 aa10.7□□□□□ -0.7
TTC28-201ENST00000397906 PABPC4LP0CB38 370 aaKnown RBP10.7□□□□□ -0.7
TTC28-201ENST00000397906 FNTBP49356 437 aa10.7□□□□□ -0.7
TTC28-201ENST00000397906 IST1P53990 364 aa10.7□□□□□ -0.7
TTC28-201ENST00000397906 PLCXD3Q63HM9 321 aa10.7□□□□□ -0.7
TTC28-201ENST00000397906 TLDC1Q6P9B6 456 aa10.7□□□□□ -0.7
TTC28-201ENST00000397906 VN1R2Q8NFZ6 395 aa10.7□□□□□ -0.7
TTC28-201ENST00000397906 KLHL15Q96M94 604 aa10.7□□□□□ -0.7
TTC28-201ENST00000397906 C14orf119Q9NWQ9 140 aa10.7□□□□□ -0.7
TTC28-201ENST00000397906 DRGXA6NNA5 263 aa10.7□□□□□ -0.7
TTC28-201ENST00000397906 ANKRD30BLA7E2S9 258 aa10.7□□□□□ -0.7
TTC28-201ENST00000397906 ZBED5Q49AG3 693 aa10.7□□□□□ -0.7
TTC28-201ENST00000397906 TCTN2Q96GX1 697 aa10.7□□□□□ -0.7
TTC28-201ENST00000397906 CBLCQ9ULV8 474 aa10.7□□□□□ -0.7
TTC28-201ENST00000397906 AIMP2Q13155 320 aaKnown RBP10.69□□□□□ -0.7
TTC28-201ENST00000397906 EIF2S3LQ2VIR3 472 aaKnown RBP10.69□□□□□ -0.7
TTC28-201ENST00000397906 OR1J4Q8NGS1 313 aa10.69□□□□□ -0.7
TTC28-201ENST00000397906 L3HYPDHQ96EM0 354 aa10.69□□□□□ -0.7
TTC28-201ENST00000397906 PRSS16Q9NQE7 514 aa10.69□□□□□ -0.7
TTC28-201ENST00000397906 CLCA1A8K7I4 914 aa10.69□□□□□ -0.7
TTC28-201ENST00000397906 SLC19A2O60779 497 aa10.69□□□□□ -0.7
TTC28-201ENST00000397906 RGRP47804 291 aa10.69□□□□□ -0.7
TTC28-201ENST00000397906 MUCL1Q96DR8 90 aa10.69□□□□□ -0.7
TTC28-201ENST00000397906 FOXQ1Q9C009 403 aa10.69□□□□□ -0.7
TTC28-201ENST00000397906 ZBP1Q9H171 429 aa10.69□□□□□ -0.7
TTC28-201ENST00000397906 RPS3P23396 243 aaKnown RBP eCLIP10.69□□□□□ -0.7
TTC28-201ENST00000397906 GABRA2P47869 451 aa10.69□□□□□ -0.7
TTC28-201ENST00000397906 DCDP81605 110 aaKnown RBP10.69□□□□□ -0.7
TTC28-201ENST00000397906 CDRT4Q8N9R6 151 aa10.69□□□□□ -0.7
TTC28-201ENST00000397906 GAREM2Q75VX8 874 aa10.69□□□□□ -0.7
TTC28-201ENST00000397906 SLC35F2Q8IXU6 374 aa10.69□□□□□ -0.7
TTC28-201ENST00000397906 MINDY2Q8NBR6 621 aa10.69□□□□□ -0.7
TTC28-201ENST00000397906 RFT1Q96AA3 541 aa10.69□□□□□ -0.7
TTC28-201ENST00000397906 CSNK1G3Q9Y6M4 447 aa10.69□□□□□ -0.7
TTC28-201ENST00000397906 TMEM189-UBE2V1I3L0A0 370 aa10.69□□□□□ -0.7
TTC28-201ENST00000397906 ZFAND5O76080 213 aa10.69□□□□□ -0.7
TTC28-201ENST00000397906 PRDX3P30048 256 aaKnown RBP10.69□□□□□ -0.7
TTC28-201ENST00000397906 PITPNBP48739 271 aa10.69□□□□□ -0.7
TTC28-201ENST00000397906 PRPS1P60891 318 aa10.69□□□□□ -0.7
TTC28-201ENST00000397906 MVKQ03426 396 aa10.69□□□□□ -0.7
TTC28-201ENST00000397906 ANKK1Q8NFD2 765 aa10.69□□□□□ -0.7
TTC28-201ENST00000397906 MAFAQ8NHW3 353 aaPredicted RBP10.69□□□□□ -0.7
TTC28-201ENST00000397906 SLC22A12Q96S37 553 aa10.69□□□□□ -0.7
TTC28-201ENST00000397906 TRAV27A0A087WT01 109 aa10.69□□□□□ -0.7
TTC28-201ENST00000397906 FBXO45P0C2W1 286 aa10.69□□□□□ -0.7
TTC28-201ENST00000397906 SENP5Q96HI0 755 aaPredicted RBP10.69□□□□□ -0.7
TTC28-201ENST00000397906 GABRR1P24046 479 aa10.69□□□□□ -0.7
TTC28-201ENST00000397906 NUDT1P36639 197 aa10.69□□□□□ -0.7
TTC28-201ENST00000397906 ERVK-25P63136 954 aa10.69□□□□□ -0.7
TTC28-201ENST00000397906 MBTPS1Q14703 1052 aa10.69□□□□□ -0.7
TTC28-201ENST00000397906 TREX2Q9BQ50 279 aaPredicted RBP10.69□□□□□ -0.7
TTC28-201ENST00000397906 IL17CQ9P0M4 197 aa10.69□□□□□ -0.7
TTC28-201ENST00000397906 OR14J1Q9UGF5 321 aa10.69□□□□□ -0.7
TTC28-201ENST00000397906 PRLHRP49683 370 aa10.69□□□□□ -0.7
TTC28-201ENST00000397906 LTC4SQ16873 150 aa10.69□□□□□ -0.7
TTC28-201ENST00000397906 OR4K5Q8NGD3 323 aa10.69□□□□□ -0.7
TTC28-201ENST00000397906 FAM46BQ96A09 425 aa10.69□□□□□ -0.7
TTC28-201ENST00000397906 OXSR1O95747 527 aaPredicted RBP10.69□□□□□ -0.7
TTC28-201ENST00000397906 MTNR1AP48039 350 aa10.69□□□□□ -0.7
TTC28-201ENST00000397906 OR5T1Q8NG75 326 aa10.69□□□□□ -0.7
TTC28-201ENST00000397906 CFAP77Q6ZQR2 320 aa10.69□□□□□ -0.7
TTC28-201ENST00000397906 OR5K2Q8NHB8 316 aa10.69□□□□□ -0.7
TTC28-201ENST00000397906 ZNF845Q96IR2 970 aaPredicted RBP10.69□□□□□ -0.7
TTC28-201ENST00000397906 CALHM2Q9HA72 323 aa10.69□□□□□ -0.7
TTC28-201ENST00000397906 EMC3Q9P0I2 261 aa10.69□□□□□ -0.7
TTC28-201ENST00000397906 BOKQ9UMX3 212 aaPredicted RBP10.69□□□□□ -0.7
TTC28-201ENST00000397906 MRPL33O75394 65 aaKnown RBP10.68□□□□□ -0.7
TTC28-201ENST00000397906 HMGN2P05204 90 aaKnown RBP10.68□□□□□ -0.7
TTC28-201ENST00000397906 TGFBR3Q03167 851 aa10.68□□□□□ -0.7
TTC28-201ENST00000397906 RANBP10Q6VN20 620 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms