RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 KCND3Q9UK17 655 aa17.98■□□□□ 0.47
PDLIM2-205ENST00000397761 DTNAQ9Y4J8 743 aa17.98■□□□□ 0.47
PDLIM2-205ENST00000397761 CDHR4A6H8M9 788 aa17.97■□□□□ 0.47
PDLIM2-205ENST00000397761 SAC3D1A6NKF1 404 aa17.97■□□□□ 0.47
PDLIM2-205ENST00000397761 TMEM200CA6NKL6 621 aa17.97■□□□□ 0.47
PDLIM2-205ENST00000397761 DXOO77932 396 aaKnown RBP17.97■□□□□ 0.47
PDLIM2-205ENST00000397761 DIRAS1O95057 198 aa17.97■□□□□ 0.47
PDLIM2-205ENST00000397761 IL7RP16871 459 aa17.97■□□□□ 0.47
PDLIM2-205ENST00000397761 DCTP40126 519 aa17.97■□□□□ 0.47
PDLIM2-205ENST00000397761 ATP12AP54707 1039 aa17.97■□□□□ 0.47
PDLIM2-205ENST00000397761 RPS15P62841 145 aaKnown RBP17.97■□□□□ 0.47
PDLIM2-205ENST00000397761 SSPNQ14714 243 aa17.97■□□□□ 0.47
PDLIM2-205ENST00000397761 EIPR1Q53HC9 387 aa17.97■□□□□ 0.47
PDLIM2-205ENST00000397761 TCTN3Q6NUS6 607 aa17.97■□□□□ 0.47
PDLIM2-205ENST00000397761 LACC1Q8IV20 430 aa17.97■□□□□ 0.47
PDLIM2-205ENST00000397761 SLC34A3Q8N130 599 aa17.97■□□□□ 0.47
PDLIM2-205ENST00000397761 CLIP4Q8N3C7 705 aa17.97■□□□□ 0.47
PDLIM2-205ENST00000397761 AMER2Q8N7J2 671 aa17.97■□□□□ 0.47
PDLIM2-205ENST00000397761 PHF10Q8WUB8 498 aaKnown RBP17.97■□□□□ 0.47
PDLIM2-205ENST00000397761 DIO2Q92813 273 aa17.97■□□□□ 0.47
PDLIM2-205ENST00000397761 NRBF2Q96F24 287 aa17.97■□□□□ 0.47
PDLIM2-205ENST00000397761 PIP5K1AQ99755 562 aa17.97■□□□□ 0.47
PDLIM2-205ENST00000397761 SLC29A1Q99808 456 aa17.97■□□□□ 0.47
PDLIM2-205ENST00000397761 COQ10BQ9H8M1 238 aa17.97■□□□□ 0.47
PDLIM2-205ENST00000397761 EVA1AQ9H8M9 152 aa17.97■□□□□ 0.47
PDLIM2-205ENST00000397761 CACYBPQ9HB71 228 aaKnown RBP17.97■□□□□ 0.47
PDLIM2-205ENST00000397761 MRTO4Q9UKD2 239 aaKnown RBP17.97■□□□□ 0.47
PDLIM2-205ENST00000397761 LRRC42Q9Y546 428 aa17.97■□□□□ 0.47
PDLIM2-205ENST00000397761 PCDHGA6Q9Y5G7 932 aa17.97■□□□□ 0.47
PDLIM2-205ENST00000397761 NPIPA5A0A0B4J1W7 369 aa17.96■□□□□ 0.47
PDLIM2-205ENST00000397761 NPIPA7E9PJI5 369 aa17.96■□□□□ 0.47
PDLIM2-205ENST00000397761 ADAMDEC1O15204 470 aa17.96■□□□□ 0.47
PDLIM2-205ENST00000397761 TSPAN2O60636 221 aa17.96■□□□□ 0.47
PDLIM2-205ENST00000397761 RASAL1O95294 804 aa17.96■□□□□ 0.47
PDLIM2-205ENST00000397761 NPIPA8P0DM63 369 aa17.96■□□□□ 0.47
PDLIM2-205ENST00000397761 HMGA2P52926 109 aa17.96■□□□□ 0.47
PDLIM2-205ENST00000397761 PLAURQ03405 335 aa17.96■□□□□ 0.47
PDLIM2-205ENST00000397761 GK3PQ14409 553 aa17.96■□□□□ 0.47
PDLIM2-205ENST00000397761 NPTX1Q15818 432 aa17.96■□□□□ 0.47
PDLIM2-205ENST00000397761 EXT1Q16394 746 aa17.96■□□□□ 0.47
PDLIM2-205ENST00000397761 ZSWIM7Q19AV6 140 aa17.96■□□□□ 0.47
PDLIM2-205ENST00000397761 PLAG1Q6DJT9 500 aa17.96■□□□□ 0.47
PDLIM2-205ENST00000397761 SHQ1Q6PI26 577 aaKnown RBP17.96■□□□□ 0.47
PDLIM2-205ENST00000397761 IZUMO2Q6UXV1 221 aa17.96■□□□□ 0.47
PDLIM2-205ENST00000397761 ZBTB49Q6ZSB9 765 aa17.96■□□□□ 0.47
PDLIM2-205ENST00000397761 TMEM179BQ7Z7N9 219 aa17.96■□□□□ 0.47
PDLIM2-205ENST00000397761 DTX1Q86Y01 620 aa17.96■□□□□ 0.47
PDLIM2-205ENST00000397761 GRAMD2AQ8IUY3 354 aa17.96■□□□□ 0.47
PDLIM2-205ENST00000397761 OR6T1Q8NGN1 323 aa17.96■□□□□ 0.47
PDLIM2-205ENST00000397761 OR5K1Q8NHB7 308 aa17.96■□□□□ 0.47
PDLIM2-205ENST00000397761 DHRS1Q96LJ7 313 aa17.96■□□□□ 0.47
PDLIM2-205ENST00000397761 EPYCQ99645 322 aa17.96■□□□□ 0.47
PDLIM2-205ENST00000397761 ZNF184Q99676 751 aaPredicted RBP17.96■□□□□ 0.47
PDLIM2-205ENST00000397761 TACO1Q9BSH4 297 aaKnown RBP17.96■□□□□ 0.47
PDLIM2-205ENST00000397761 NRSN2Q9GZP1 204 aa17.96■□□□□ 0.47
PDLIM2-205ENST00000397761 KLHL28Q9NXS3 571 aa17.96■□□□□ 0.47
PDLIM2-205ENST00000397761 TRBV11-1A0A0K0K1C0 115 aa17.95■□□□□ 0.46
PDLIM2-205ENST00000397761 M0R3H8 397 aa17.95■□□□□ 0.46
PDLIM2-205ENST00000397761 SOCS2O14508 198 aa17.95■□□□□ 0.46
PDLIM2-205ENST00000397761 GNGT2O14610 69 aa17.95■□□□□ 0.46
PDLIM2-205ENST00000397761 FFAR1O14842 300 aa17.95■□□□□ 0.46
PDLIM2-205ENST00000397761 ZNF23P17027 643 aa17.95■□□□□ 0.46
PDLIM2-205ENST00000397761 F8A1P23610 371 aa17.95■□□□□ 0.46
PDLIM2-205ENST00000397761 RBMS1P29558 406 aaKnown RBP17.95■□□□□ 0.46
PDLIM2-205ENST00000397761 DNAJA1P31689 397 aaKnown RBP17.95■□□□□ 0.46
PDLIM2-205ENST00000397761 LIMS1P48059 325 aa17.95■□□□□ 0.46
PDLIM2-205ENST00000397761 NR0B1P51843 470 aaKnown RBP17.95■□□□□ 0.46
PDLIM2-205ENST00000397761 IST1P53990 364 aa17.95■□□□□ 0.46
PDLIM2-205ENST00000397761 RPS18P62269 152 aaKnown RBP17.95■□□□□ 0.46
PDLIM2-205ENST00000397761 FGFBP1Q14512 234 aa17.95■□□□□ 0.46
PDLIM2-205ENST00000397761 NDUFAF7Q7L592 441 aa17.95■□□□□ 0.46
PDLIM2-205ENST00000397761 RBM45Q8IUH3 476 aaKnown RBP17.95■□□□□ 0.46
PDLIM2-205ENST00000397761 CMIPQ8IY22 773 aa17.95■□□□□ 0.46
PDLIM2-205ENST00000397761 CBR4Q8N4T8 237 aa17.95■□□□□ 0.46
PDLIM2-205ENST00000397761 OR5L2Q8NGL0 311 aa17.95■□□□□ 0.46
PDLIM2-205ENST00000397761 M1APQ8TC57 530 aa17.95■□□□□ 0.46
PDLIM2-205ENST00000397761 NKD1Q969G9 470 aa17.95■□□□□ 0.46
PDLIM2-205ENST00000397761 SLC35B4Q969S0 331 aa17.95■□□□□ 0.46
PDLIM2-205ENST00000397761 HOXD1Q9GZZ0 328 aa17.95■□□□□ 0.46
PDLIM2-205ENST00000397761 GABARAPL1Q9H0R8 117 aa17.95■□□□□ 0.46
PDLIM2-205ENST00000397761 REEP1Q9H902 201 aa17.95■□□□□ 0.46
PDLIM2-205ENST00000397761 MMP25Q9NPA2 562 aa17.95■□□□□ 0.46
PDLIM2-205ENST00000397761 RLIMQ9NVW2 624 aa17.95■□□□□ 0.46
PDLIM2-205ENST00000397761 LYVE1Q9Y5Y7 322 aa17.95■□□□□ 0.46
PDLIM2-205ENST00000397761 CLDN24A6NM45 220 aa17.95■□□□□ 0.46
PDLIM2-205ENST00000397761 PDLIM1O00151 329 aa17.95■□□□□ 0.46
PDLIM2-205ENST00000397761 ZFAND5O76080 213 aa17.95■□□□□ 0.46
PDLIM2-205ENST00000397761 NGFRP08138 427 aa17.95■□□□□ 0.46
PDLIM2-205ENST00000397761 FPR1P21462 350 aa17.95■□□□□ 0.46
PDLIM2-205ENST00000397761 ABCD3P28288 659 aa17.95■□□□□ 0.46
PDLIM2-205ENST00000397761 RRM2P31350 389 aa17.95■□□□□ 0.46
PDLIM2-205ENST00000397761 DLSTP36957 453 aa17.95■□□□□ 0.46
PDLIM2-205ENST00000397761 RFX3P48380 749 aa17.95■□□□□ 0.46
PDLIM2-205ENST00000397761 PNLIPRP2P54317 469 aa17.95■□□□□ 0.46
PDLIM2-205ENST00000397761 KLHL26Q53HC5 615 aa17.95■□□□□ 0.46
PDLIM2-205ENST00000397761 PDZK1Q5T2W1 519 aa17.95■□□□□ 0.46
PDLIM2-205ENST00000397761 MRPL2Q5T653 305 aaKnown RBP17.95■□□□□ 0.46
PDLIM2-205ENST00000397761 ZDHHC13Q8IUH4 622 aa17.95■□□□□ 0.46
PDLIM2-205ENST00000397761 OR4C15Q8NGM1 316 aa17.95■□□□□ 0.46
PDLIM2-205ENST00000397761 OR4C3Q8NH37 302 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms