RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 RNF220Q5VTB9 566 aa21.7■■□□□ 1.06
TSPAN4-202ENST00000397396 NUP54Q7Z3B4 507 aa21.7■■□□□ 1.06
TSPAN4-202ENST00000397396 GALNT10Q86SR1 603 aa21.7■■□□□ 1.06
TSPAN4-202ENST00000397396 GEMIN6Q8WXD5 167 aaKnown RBP21.7■■□□□ 1.06
TSPAN4-202ENST00000397396 ASB15Q8WXK1 588 aa21.7■■□□□ 1.06
TSPAN4-202ENST00000397396 SPACA9Q96E40 222 aaPredicted RBP21.7■■□□□ 1.06
TSPAN4-202ENST00000397396 SLC47A1Q96FL8 570 aa21.7■■□□□ 1.06
TSPAN4-202ENST00000397396 TPD52L3Q96J77 140 aa21.7■■□□□ 1.06
TSPAN4-202ENST00000397396 HSH2DQ96JZ2 352 aa21.7■■□□□ 1.06
TSPAN4-202ENST00000397396 LMF1Q96S06 567 aa21.7■■□□□ 1.06
TSPAN4-202ENST00000397396 LIN28AQ9H9Z2 209 aaKnown RBP21.7■■□□□ 1.06
TSPAN4-202ENST00000397396 ST6GALNAC1Q9NSC7 600 aaPredicted RBP21.7■■□□□ 1.06
TSPAN4-202ENST00000397396 FBXO34Q9NWN3 711 aa21.7■■□□□ 1.06
TSPAN4-202ENST00000397396 ABCG2Q9UNQ0 655 aa21.7■■□□□ 1.06
TSPAN4-202ENST00000397396 SSUH2Q9Y2M2 353 aa21.7■■□□□ 1.06
TSPAN4-202ENST00000397396 NPIPB9F8W1W9 429 aa21.69■■□□□ 1.06
TSPAN4-202ENST00000397396 H3BNH8 94 aa21.69■■□□□ 1.06
TSPAN4-202ENST00000397396 TP53I11O14683 189 aa21.69■■□□□ 1.06
TSPAN4-202ENST00000397396 EFSO43281 561 aa21.69■■□□□ 1.06
TSPAN4-202ENST00000397396 UGT2B17O75795 530 aa21.69■■□□□ 1.06
TSPAN4-202ENST00000397396 UTS2O95399 124 aa21.69■■□□□ 1.06
TSPAN4-202ENST00000397396 RAP2AP10114 183 aa21.69■■□□□ 1.06
TSPAN4-202ENST00000397396 CD247P20963 164 aa21.69■■□□□ 1.06
TSPAN4-202ENST00000397396 TBXA2RP21731 343 aa21.69■■□□□ 1.06
TSPAN4-202ENST00000397396 EIF2S3P41091 472 aaKnown RBP21.69■■□□□ 1.06
TSPAN4-202ENST00000397396 SRSF6Q13247 344 aaKnown RBP21.69■■□□□ 1.06
TSPAN4-202ENST00000397396 ADGRG5Q8IZF4 528 aa21.69■■□□□ 1.06
TSPAN4-202ENST00000397396 GALNT16Q8N428 558 aa21.69■■□□□ 1.06
TSPAN4-202ENST00000397396 TMEM156Q8N614 296 aa21.69■■□□□ 1.06
TSPAN4-202ENST00000397396 CCM2LQ9NUG4 571 aaPredicted RBP21.69■■□□□ 1.06
TSPAN4-202ENST00000397396 AURKCQ9UQB9 309 aa21.69■■□□□ 1.06
TSPAN4-202ENST00000397396 SLC9A8Q9Y2E8 581 aa21.69■■□□□ 1.06
TSPAN4-202ENST00000397396 A0A1W2PQD3 144 aa21.68■■□□□ 1.06
TSPAN4-202ENST00000397396 CYP4B1P13584 511 aa21.68■■□□□ 1.06
TSPAN4-202ENST00000397396 WT1P19544 449 aaPredicted RBP21.68■■□□□ 1.06
TSPAN4-202ENST00000397396 UCNP55089 124 aa21.68■■□□□ 1.06
TSPAN4-202ENST00000397396 KCNC4Q03721 635 aa21.68■■□□□ 1.06
TSPAN4-202ENST00000397396 NTRK2Q16620 822 aa21.68■■□□□ 1.06
TSPAN4-202ENST00000397396 ACER2Q5QJU3 275 aa21.68■■□□□ 1.06
TSPAN4-202ENST00000397396 ATP1A1-AS1Q5TC04 95 aa21.68■■□□□ 1.06
TSPAN4-202ENST00000397396 ABHD17BQ5VST6 288 aa21.68■■□□□ 1.06
TSPAN4-202ENST00000397396 ENPP6Q6UWR7 440 aa21.68■■□□□ 1.06
TSPAN4-202ENST00000397396 CCDC81Q6ZN84 652 aa21.68■■□□□ 1.06
TSPAN4-202ENST00000397396 LRRC69Q6ZNQ3 347 aa21.68■■□□□ 1.06
TSPAN4-202ENST00000397396 OLIG3Q7RTU3 272 aa21.68■■□□□ 1.06
TSPAN4-202ENST00000397396 ZAR1Q86SH2 424 aa21.68■■□□□ 1.06
TSPAN4-202ENST00000397396 SMYD1Q8NB12 490 aa21.68■■□□□ 1.06
TSPAN4-202ENST00000397396 CANT1Q8WVQ1 401 aa21.68■■□□□ 1.06
TSPAN4-202ENST00000397396 SECISBP2Q96T21 854 aaKnown RBP21.68■■□□□ 1.06
TSPAN4-202ENST00000397396 QRSL1Q9H0R6 528 aaKnown RBP21.68■■□□□ 1.06
TSPAN4-202ENST00000397396 ING2Q9H160 280 aa21.68■■□□□ 1.06
TSPAN4-202ENST00000397396 ARMC1Q9NVT9 282 aa21.68■■□□□ 1.06
TSPAN4-202ENST00000397396 SLC35A3Q9Y2D2 325 aa21.68■■□□□ 1.06
TSPAN4-202ENST00000397396 DTNAQ9Y4J8 743 aa21.68■■□□□ 1.06
TSPAN4-202ENST00000397396 PCSK5Q92824 1860 aa21.67■■□□□ 1.06
TSPAN4-202ENST00000397396 FESP07332 822 aa21.67■■□□□ 1.06
TSPAN4-202ENST00000397396 FCGR1AP12314 374 aa21.67■■□□□ 1.06
TSPAN4-202ENST00000397396 CASRP41180 1078 aa21.67■■□□□ 1.06
TSPAN4-202ENST00000397396 RIPK1Q13546 671 aa21.67■■□□□ 1.06
TSPAN4-202ENST00000397396 TBCELQ5QJ74 424 aa21.67■■□□□ 1.06
TSPAN4-202ENST00000397396 PDZK1Q5T2W1 519 aa21.67■■□□□ 1.06
TSPAN4-202ENST00000397396 MISPQ8IVT2 679 aa21.67■■□□□ 1.06
TSPAN4-202ENST00000397396 SPACA3Q8IXA5 215 aa21.67■■□□□ 1.06
TSPAN4-202ENST00000397396 SIRT6Q8N6T7 355 aa21.67■■□□□ 1.06
TSPAN4-202ENST00000397396 ZNF614Q8N883 585 aa21.67■■□□□ 1.06
TSPAN4-202ENST00000397396 PSMF1Q92530 271 aa21.67■■□□□ 1.06
TSPAN4-202ENST00000397396 SLC35B4Q969S0 331 aa21.67■■□□□ 1.06
TSPAN4-202ENST00000397396 SEPHS2Q99611 448 aa21.67■■□□□ 1.06
TSPAN4-202ENST00000397396 ZBTB20Q9HC78 741 aaPredicted RBP21.67■■□□□ 1.06
TSPAN4-202ENST00000397396 AP4S1Q9Y587 144 aa21.67■■□□□ 1.06
TSPAN4-202ENST00000397396 V9GYQ6 96 aa21.67■■□□□ 1.06
TSPAN4-202ENST00000397396 ICOSLGO75144 302 aa21.66■■□□□ 1.06
TSPAN4-202ENST00000397396 UGT2B11O75310 529 aa21.66■■□□□ 1.06
TSPAN4-202ENST00000397396 OXSR1O95747 527 aaPredicted RBP21.66■■□□□ 1.06
TSPAN4-202ENST00000397396 ITGA2P17301 1181 aa21.66■■□□□ 1.06
TSPAN4-202ENST00000397396 ADH7P40394 386 aa21.66■■□□□ 1.06
TSPAN4-202ENST00000397396 SOX3P41225 446 aa21.66■■□□□ 1.06
TSPAN4-202ENST00000397396 ERFP50548 548 aa21.66■■□□□ 1.06
TSPAN4-202ENST00000397396 FGFBP1Q14512 234 aa21.66■■□□□ 1.06
TSPAN4-202ENST00000397396 DUSP7Q16829 419 aa21.66■■□□□ 1.06
TSPAN4-202ENST00000397396 GRAMD1BQ3KR37 738 aa21.66■■□□□ 1.06
TSPAN4-202ENST00000397396 LYPD8Q6UX82 237 aa21.66■■□□□ 1.06
TSPAN4-202ENST00000397396 C16orf47Q6ZP98 133 aaPredicted RBP21.66■■□□□ 1.06
TSPAN4-202ENST00000397396 ERMP1Q7Z2K6 904 aa21.66■■□□□ 1.06
TSPAN4-202ENST00000397396 VRK2Q86Y07 508 aa21.66■■□□□ 1.06
TSPAN4-202ENST00000397396 APLFQ8IW19 511 aaPredicted RBP21.66■■□□□ 1.06
TSPAN4-202ENST00000397396 PAPD5Q8NDF8 572 aaKnown RBP21.66■■□□□ 1.06
TSPAN4-202ENST00000397396 SGCZQ96LD1 299 aa21.66■■□□□ 1.06
TSPAN4-202ENST00000397396 TBL1XR1Q9BZK7 514 aa21.66■■□□□ 1.06
TSPAN4-202ENST00000397396 DCLRE1BQ9H816 532 aa21.66■■□□□ 1.06
TSPAN4-202ENST00000397396 S100A14Q9HCY8 104 aa21.66■■□□□ 1.06
TSPAN4-202ENST00000397396 HPF1Q9NWY4 346 aa21.66■■□□□ 1.06
TSPAN4-202ENST00000397396 NPIPA5A0A0B4J1W7 369 aa21.65■■□□□ 1.06
TSPAN4-202ENST00000397396 SERINC4A6NH21 518 aa21.65■■□□□ 1.06
TSPAN4-202ENST00000397396 ALG1L2C9J202 215 aa21.65■■□□□ 1.06
TSPAN4-202ENST00000397396 NPIPA7E9PJI5 369 aa21.65■■□□□ 1.06
TSPAN4-202ENST00000397396 MASP2O00187 686 aa21.65■■□□□ 1.06
TSPAN4-202ENST00000397396 HNRNPRO43390 633 aaKnown RBP21.65■■□□□ 1.06
TSPAN4-202ENST00000397396 MGRN1O60291 552 aa21.65■■□□□ 1.06
TSPAN4-202ENST00000397396 LGI1O95970 557 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms