RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 TMED5Q9Y3A6 229 aa4.04□□□□□ -1.76
HMGB1P10-201ENST00000395823 AUP1Q9Y679 476 aa4.04□□□□□ -1.76
HMGB1P10-201ENST00000395823 EIF4G1Q04637 1599 aaKnown RBP4.04□□□□□ -1.76
HMGB1P10-201ENST00000395823 ARPC4-TTLL3A0A0A6YYG9 625 aa4.03□□□□□ -1.76
HMGB1P10-201ENST00000395823 FOXI3A8MTJ6 420 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P10-201ENST00000395823 A8MXK9 166 aa4.03□□□□□ -1.76
HMGB1P10-201ENST00000395823 ARHGEF9O43307 516 aa4.03□□□□□ -1.76
HMGB1P10-201ENST00000395823 STX11O75558 287 aa4.03□□□□□ -1.76
HMGB1P10-201ENST00000395823 ADCY5O95622 1261 aa4.03□□□□□ -1.76
HMGB1P10-201ENST00000395823 SPRP35270 261 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P10-201ENST00000395823 PLOD1Q02809 727 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P10-201ENST00000395823 MECOMQ03112 1051 aa4.03□□□□□ -1.76
HMGB1P10-201ENST00000395823 ACY1Q03154 408 aa4.03□□□□□ -1.76
HMGB1P10-201ENST00000395823 ATXN7L3Q14CW9 347 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P10-201ENST00000395823 SYPL1Q16563 259 aa4.03□□□□□ -1.76
HMGB1P10-201ENST00000395823 RABL6Q3YEC7 729 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P10-201ENST00000395823 FILIP1LQ4L180 1135 aa4.03□□□□□ -1.76
HMGB1P10-201ENST00000395823 C14orf28Q4W4Y0 310 aa4.03□□□□□ -1.76
HMGB1P10-201ENST00000395823 MS4A13Q5J8X5 152 aa4.03□□□□□ -1.76
HMGB1P10-201ENST00000395823 C9orf66Q5T8R8 295 aa4.03□□□□□ -1.76
HMGB1P10-201ENST00000395823 ZC2HC1BQ5TFG8 222 aa4.03□□□□□ -1.76
HMGB1P10-201ENST00000395823 ATF7IP2Q5U623 682 aa4.03□□□□□ -1.76
HMGB1P10-201ENST00000395823 STAC2Q6ZMT1 411 aa4.03□□□□□ -1.76
HMGB1P10-201ENST00000395823 LRRC70Q7Z2Q7 622 aa4.03□□□□□ -1.76
HMGB1P10-201ENST00000395823 TMEM17Q86X19 198 aa4.03□□□□□ -1.76
HMGB1P10-201ENST00000395823 PHC2Q8IXK0 858 aa4.03□□□□□ -1.76
HMGB1P10-201ENST00000395823 ZNF683Q8IZ20 524 aa4.03□□□□□ -1.76
HMGB1P10-201ENST00000395823 LINC01561Q8N1V8 128 aa4.03□□□□□ -1.76
HMGB1P10-201ENST00000395823 OR8J1Q8NGP2 316 aa4.03□□□□□ -1.76
HMGB1P10-201ENST00000395823 TBCKQ8TEA7 893 aa4.03□□□□□ -1.76
HMGB1P10-201ENST00000395823 CRYGNQ8WXF5 182 aa4.03□□□□□ -1.76
HMGB1P10-201ENST00000395823 C18orf12Q96KH6 178 aa4.03□□□□□ -1.76
HMGB1P10-201ENST00000395823 GON7Q9BXV9 100 aa4.03□□□□□ -1.76
HMGB1P10-201ENST00000395823 MAGT1Q9H0U3 335 aa4.03□□□□□ -1.76
HMGB1P10-201ENST00000395823 POLR3FQ9H1D9 316 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P10-201ENST00000395823 JPT2Q9H910 190 aa4.03□□□□□ -1.76
HMGB1P10-201ENST00000395823 CLEC4AQ9UMR7 237 aa4.03□□□□□ -1.76
HMGB1P10-201ENST00000395823 IGHV3OR16-10A0A075B7F0 116 aa4.02□□□□□ -1.77
HMGB1P10-201ENST00000395823 LINC00854A0A1B0GVQ3 168 aa4.02□□□□□ -1.77
HMGB1P10-201ENST00000395823 C11orf98E9PRG8 122 aa4.02□□□□□ -1.77
HMGB1P10-201ENST00000395823 BTN3A3O00478 584 aa4.02□□□□□ -1.77
HMGB1P10-201ENST00000395823 PRRG1O14668 218 aa4.02□□□□□ -1.77
HMGB1P10-201ENST00000395823 STAMBPO95630 424 aa4.02□□□□□ -1.77
HMGB1P10-201ENST00000395823 POP4O95707 220 aaKnown RBP4.02□□□□□ -1.77
HMGB1P10-201ENST00000395823 NUDT14O95848 222 aa4.02□□□□□ -1.77
HMGB1P10-201ENST00000395823 IL1BP01584 269 aa4.02□□□□□ -1.77
HMGB1P10-201ENST00000395823 IGKV3-20P01619 116 aa4.02□□□□□ -1.77
HMGB1P10-201ENST00000395823 IGFBP1P08833 259 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P10-201ENST00000395823 GZMAP12544 262 aa4.02□□□□□ -1.77
HMGB1P10-201ENST00000395823 IGFBP5P24593 272 aa4.02□□□□□ -1.77
HMGB1P10-201ENST00000395823 PPP2R1BP30154 601 aa4.02□□□□□ -1.77
HMGB1P10-201ENST00000395823 OXTRP30559 389 aa4.02□□□□□ -1.77
HMGB1P10-201ENST00000395823 RIDAP52758 137 aaKnown RBP4.02□□□□□ -1.77
HMGB1P10-201ENST00000395823 IMMTQ16891 758 aaKnown RBP4.02□□□□□ -1.77
HMGB1P10-201ENST00000395823 BOLA3Q53S33 107 aa4.02□□□□□ -1.77
HMGB1P10-201ENST00000395823 FAM120AOSQ5T036 256 aa4.02□□□□□ -1.77
HMGB1P10-201ENST00000395823 PMF1Q6P1K2 205 aa4.02□□□□□ -1.77
HMGB1P10-201ENST00000395823 EMBQ6PCB8 327 aa4.02□□□□□ -1.77
HMGB1P10-201ENST00000395823 SLC38A6Q8IZM9 456 aa4.02□□□□□ -1.77
HMGB1P10-201ENST00000395823 OR4Q3Q8NH05 313 aa4.02□□□□□ -1.77
HMGB1P10-201ENST00000395823 NPRL2Q8WTW4 380 aa4.02□□□□□ -1.77
HMGB1P10-201ENST00000395823 TADA1Q96BN2 335 aa4.02□□□□□ -1.77
HMGB1P10-201ENST00000395823 SLC41A3Q96GZ6 507 aa4.02□□□□□ -1.77
HMGB1P10-201ENST00000395823 NAF1Q96HR8 494 aaKnown RBP4.02□□□□□ -1.77
HMGB1P10-201ENST00000395823 AMDHD1Q96NU7 426 aa4.02□□□□□ -1.77
HMGB1P10-201ENST00000395823 ATF6BQ99941 703 aa4.02□□□□□ -1.77
HMGB1P10-201ENST00000395823 OMDQ99983 421 aa4.02□□□□□ -1.77
HMGB1P10-201ENST00000395823 SLC30A2Q9BRI3 323 aa4.02□□□□□ -1.77
HMGB1P10-201ENST00000395823 CHCHD5Q9BSY4 110 aa4.02□□□□□ -1.77
HMGB1P10-201ENST00000395823 NFKBIZQ9BYH8 718 aa4.02□□□□□ -1.77
HMGB1P10-201ENST00000395823 TRIM9Q9C026 710 aa4.02□□□□□ -1.77
HMGB1P10-201ENST00000395823 TUBB1Q9H4B7 451 aa4.02□□□□□ -1.77
HMGB1P10-201ENST00000395823 SP140LQ9H930 580 aa4.02□□□□□ -1.77
HMGB1P10-201ENST00000395823 LRRC40Q9H9A6 602 aa4.02□□□□□ -1.77
HMGB1P10-201ENST00000395823 NMRK1Q9NWW6 199 aa4.02□□□□□ -1.77
HMGB1P10-201ENST00000395823 MDFICQ9P1T7 246 aa4.02□□□□□ -1.77
HMGB1P10-201ENST00000395823 GALPQ9UBC7 116 aa4.02□□□□□ -1.77
HMGB1P10-201ENST00000395823 GNG12Q9UBI6 72 aa4.02□□□□□ -1.77
HMGB1P10-201ENST00000395823 BARX2Q9UMQ3 279 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P10-201ENST00000395823 KIF16BQ96L93 1317 aa4.01□□□□□ -1.77
HMGB1P10-201ENST00000395823 IGHV3OR16-12A0A075B7B8 117 aa4.01□□□□□ -1.77
HMGB1P10-201ENST00000395823 TRBV7-9A0A0J9YWB2 115 aa4.01□□□□□ -1.77
HMGB1P10-201ENST00000395823 METTL21EPA6NDL7 271 aa4.01□□□□□ -1.77
HMGB1P10-201ENST00000395823 L7N2F9 121 aa4.01□□□□□ -1.77
HMGB1P10-201ENST00000395823 ARPC3O15145 178 aa4.01□□□□□ -1.77
HMGB1P10-201ENST00000395823 NUDT21O43809 227 aaKnown RBP4.01□□□□□ -1.77
HMGB1P10-201ENST00000395823 RAMP1O60894 148 aa4.01□□□□□ -1.77
HMGB1P10-201ENST00000395823 SLITRK3O94933 977 aa4.01□□□□□ -1.77
HMGB1P10-201ENST00000395823 F10P00742 488 aa4.01□□□□□ -1.77
HMGB1P10-201ENST00000395823 CAPN1P07384 714 aa4.01□□□□□ -1.77
HMGB1P10-201ENST00000395823 CCDC172P0C7W6 258 aa4.01□□□□□ -1.77
HMGB1P10-201ENST00000395823 CAPGP40121 348 aa4.01□□□□□ -1.77
HMGB1P10-201ENST00000395823 ATP5OP48047 213 aa4.01□□□□□ -1.77
HMGB1P10-201ENST00000395823 NOVA1P51513 510 aaKnown RBP4.01□□□□□ -1.77
HMGB1P10-201ENST00000395823 CCNA1P78396 465 aa4.01□□□□□ -1.77
HMGB1P10-201ENST00000395823 IRX1P78414 480 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P10-201ENST00000395823 GSTO1P78417 241 aa4.01□□□□□ -1.77
HMGB1P10-201ENST00000395823 TNFRSF17Q02223 184 aa4.01□□□□□ -1.77
HMGB1P10-201ENST00000395823 CYLC2Q14093 348 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P10-201ENST00000395823 ELAVL3Q14576 367 aaKnown RBP4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms