RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 SPATA21Q7Z572 469 aa18.15■□□□□ 0.5
SNCA-203ENST00000394986 RETREG3Q86VR2 466 aa18.15■□□□□ 0.5
SNCA-203ENST00000394986 PLCZ1Q86YW0 608 aa18.15■□□□□ 0.5
SNCA-203ENST00000394986 NMUR2Q9GZQ4 415 aa18.15■□□□□ 0.5
SNCA-203ENST00000394986 PPP4R1LQ9P1A2 415 aa18.15■□□□□ 0.5
SNCA-203ENST00000394986 SH3BGRL2Q9UJC5 107 aa18.15■□□□□ 0.5
SNCA-203ENST00000394986 GMFGO60234 142 aa18.15■□□□□ 0.5
SNCA-203ENST00000394986 SLC19A2O60779 497 aa18.15■□□□□ 0.5
SNCA-203ENST00000394986 TRAPPC6AO75865 159 aa18.15■□□□□ 0.5
SNCA-203ENST00000394986 KRT75O95678 551 aa18.15■□□□□ 0.5
SNCA-203ENST00000394986 ANGPTL1O95841 491 aa18.15■□□□□ 0.5
SNCA-203ENST00000394986 IGHG3P01860 377 aa18.15■□□□□ 0.5
SNCA-203ENST00000394986 ETFAP13804 333 aa18.15■□□□□ 0.5
SNCA-203ENST00000394986 TBXA2RP21731 343 aa18.15■□□□□ 0.5
SNCA-203ENST00000394986 DCTP40126 519 aa18.15■□□□□ 0.5
SNCA-203ENST00000394986 KLF10Q13118 480 aa18.15■□□□□ 0.5
SNCA-203ENST00000394986 ARHGAP11BQ3KRB8 267 aa18.15■□□□□ 0.5
SNCA-203ENST00000394986 EIPR1Q53HC9 387 aa18.15■□□□□ 0.5
SNCA-203ENST00000394986 LRIF1Q5T3J3 769 aa18.15■□□□□ 0.5
SNCA-203ENST00000394986 C1QL3Q5VWW1 255 aa18.15■□□□□ 0.5
SNCA-203ENST00000394986 TRILQ7L0X0 811 aa18.15■□□□□ 0.5
SNCA-203ENST00000394986 UBQLN4Q9NRR5 601 aa18.15■□□□□ 0.5
SNCA-203ENST00000394986 EXD2Q9NVH0 621 aa18.15■□□□□ 0.5
SNCA-203ENST00000394986 MED11Q9P086 117 aa18.15■□□□□ 0.5
SNCA-203ENST00000394986 ARMCX1Q9P291 453 aa18.15■□□□□ 0.5
SNCA-203ENST00000394986 LEF1Q9UJU2 399 aaPredicted RBP18.15■□□□□ 0.5
SNCA-203ENST00000394986 MKLN1Q9UL63 735 aa18.15■□□□□ 0.5
SNCA-203ENST00000394986 FLNCQ14315 2725 aa18.14■□□□□ 0.5
SNCA-203ENST00000394986 CENPVL1A0A0U1RR11 272 aa18.14■□□□□ 0.49
SNCA-203ENST00000394986 GMNCA6NCL1 334 aa18.14■□□□□ 0.49
SNCA-203ENST00000394986 ALG1L2C9J202 215 aa18.14■□□□□ 0.49
SNCA-203ENST00000394986 SOX30O94993 753 aa18.14■□□□□ 0.49
SNCA-203ENST00000394986 NGFRP08138 427 aa18.14■□□□□ 0.49
SNCA-203ENST00000394986 ABOP16442 354 aa18.14■□□□□ 0.49
SNCA-203ENST00000394986 ENDOUP21128 410 aaKnown RBP18.14■□□□□ 0.49
SNCA-203ENST00000394986 TCEA1P23193 301 aaKnown RBP18.14■□□□□ 0.49
SNCA-203ENST00000394986 CRATP43155 626 aa18.14■□□□□ 0.49
SNCA-203ENST00000394986 CLK3P49761 638 aaKnown RBP18.14■□□□□ 0.49
SNCA-203ENST00000394986 RBPJQ06330 500 aa18.14■□□□□ 0.49
SNCA-203ENST00000394986 SRSF1Q07955 248 aaKnown RBP eCLIP18.14■□□□□ 0.49
SNCA-203ENST00000394986 GPR68Q15743 365 aa18.14■□□□□ 0.49
SNCA-203ENST00000394986 CD226Q15762 336 aa18.14■□□□□ 0.49
SNCA-203ENST00000394986 ATAD3BQ5T9A4 648 aa18.14■□□□□ 0.49
SNCA-203ENST00000394986 YRDCQ86U90 279 aaKnown RBP18.14■□□□□ 0.49
SNCA-203ENST00000394986 ANKFN1Q8N957 763 aa18.14■□□□□ 0.49
SNCA-203ENST00000394986 OR4K17Q8NGC6 315 aa18.14■□□□□ 0.49
SNCA-203ENST00000394986 DUSP19Q8WTR2 217 aa18.14■□□□□ 0.49
SNCA-203ENST00000394986 ROPN1LQ96C74 230 aa18.14■□□□□ 0.49
SNCA-203ENST00000394986 ZNF350Q9GZX5 532 aa18.14■□□□□ 0.49
SNCA-203ENST00000394986 DSN1Q9H410 356 aa18.14■□□□□ 0.49
SNCA-203ENST00000394986 LDAHQ9H6V9 325 aa18.14■□□□□ 0.49
SNCA-203ENST00000394986 EXO5Q9H790 373 aa18.14■□□□□ 0.49
SNCA-203ENST00000394986 QPCTLQ9NXS2 382 aa18.14■□□□□ 0.49
SNCA-203ENST00000394986 FAM53CQ9NYF3 392 aa18.14■□□□□ 0.49
SNCA-203ENST00000394986 VAPAQ9P0L0 249 aa18.14■□□□□ 0.49
SNCA-203ENST00000394986 TINAGQ9UJW2 476 aa18.14■□□□□ 0.49
SNCA-203ENST00000394986 NDUFAF1Q9Y375 327 aa18.14■□□□□ 0.49
SNCA-203ENST00000394986 NINQ8N4C6 2090 aa18.13■□□□□ 0.49
SNCA-203ENST00000394986 TRGV5A0A0B4J1U4 118 aa18.13■□□□□ 0.49
SNCA-203ENST00000394986 TRGV8A0A0C4DH27 118 aa18.13■□□□□ 0.49
SNCA-203ENST00000394986 SCDO00767 359 aa18.13■□□□□ 0.49
SNCA-203ENST00000394986 ANGPT2O15123 496 aa18.13■□□□□ 0.49
SNCA-203ENST00000394986 SEMA7AO75326 666 aa18.13■□□□□ 0.49
SNCA-203ENST00000394986 AK1P00568 194 aa18.13■□□□□ 0.49
SNCA-203ENST00000394986 HPNP05981 417 aa18.13■□□□□ 0.49
SNCA-203ENST00000394986 SNRPB2P08579 225 aaKnown RBP18.13■□□□□ 0.49
SNCA-203ENST00000394986 HPGDP15428 266 aa18.13■□□□□ 0.49
SNCA-203ENST00000394986 SYPL1Q16563 259 aa18.13■□□□□ 0.49
SNCA-203ENST00000394986 C3AR1Q16581 482 aa18.13■□□□□ 0.49
SNCA-203ENST00000394986 GPAT3Q53EU6 434 aa18.13■□□□□ 0.49
SNCA-203ENST00000394986 WIPI1Q5MNZ9 446 aaPredicted RBP18.13■□□□□ 0.49
SNCA-203ENST00000394986 ARHGAP11AQ6P4F7 1023 aa18.13■□□□□ 0.49
SNCA-203ENST00000394986 HMGN2P46Q86SG4 172 aa18.13■□□□□ 0.49
SNCA-203ENST00000394986 ZNF614Q8N883 585 aa18.13■□□□□ 0.49
SNCA-203ENST00000394986 FAM83FQ8NEG4 500 aaPredicted RBP18.13■□□□□ 0.49
SNCA-203ENST00000394986 OR2M3Q8NG83 312 aa18.13■□□□□ 0.49
SNCA-203ENST00000394986 NSRP1Q9H0G5 558 aaKnown RBP18.13■□□□□ 0.49
SNCA-203ENST00000394986 SPRR3Q9UBC9 169 aa18.13■□□□□ 0.49
SNCA-203ENST00000394986 KCNE5Q9UJ90 142 aa18.13■□□□□ 0.49
SNCA-203ENST00000394986 ZNF835Q9Y2P0 537 aa18.13■□□□□ 0.49
SNCA-203ENST00000394986 SLC6A5Q9Y345 797 aa18.13■□□□□ 0.49
SNCA-203ENST00000394986 NCKAP5O14513 1909 aa18.12■□□□□ 0.49
SNCA-203ENST00000394986 TRBV5-3A0A0A0MS03 114 aa18.12■□□□□ 0.49
SNCA-203ENST00000394986 NPIPA2E9PIF3 369 aa18.12■□□□□ 0.49
SNCA-203ENST00000394986 NPIPB9F8W1W9 429 aa18.12■□□□□ 0.49
SNCA-203ENST00000394986 NPIPA3F8WFD2 350 aa18.12■□□□□ 0.49
SNCA-203ENST00000394986 CLIC1O00299 241 aa18.12■□□□□ 0.49
SNCA-203ENST00000394986 NDUFB5O43674 189 aa18.12■□□□□ 0.49
SNCA-203ENST00000394986 TNFRSF21O75509 655 aa18.12■□□□□ 0.49
SNCA-203ENST00000394986 STX11O75558 287 aa18.12■□□□□ 0.49
SNCA-203ENST00000394986 CBR3O75828 277 aa18.12■□□□□ 0.49
SNCA-203ENST00000394986 AGR2O95994 175 aa18.12■□□□□ 0.49
SNCA-203ENST00000394986 STSP08842 583 aa18.12■□□□□ 0.49
SNCA-203ENST00000394986 LCN1P31025 176 aa18.12■□□□□ 0.49
SNCA-203ENST00000394986 PTGS2P35354 604 aa18.12■□□□□ 0.49
SNCA-203ENST00000394986 ATP12AP54707 1039 aa18.12■□□□□ 0.49
SNCA-203ENST00000394986 TYW3Q6IPR3 259 aaKnown RBP18.12■□□□□ 0.49
SNCA-203ENST00000394986 DLEU7Q6UYE1 221 aa18.12■□□□□ 0.49
SNCA-203ENST00000394986 FRRS1Q6ZNA5 592 aa18.12■□□□□ 0.49
SNCA-203ENST00000394986 CPLX4Q7Z7G2 160 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms