RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 SDHDO14521 159 aa2.42□□□□□ -2.02
PTPRC-205ENST00000391970 ZNF354AO60765 605 aaPredicted RBP2.42□□□□□ -2.02
PTPRC-205ENST00000391970 RAMP1O60894 148 aa2.42□□□□□ -2.02
PTPRC-205ENST00000391970 NOL3O60936 208 aaKnown RBP2.42□□□□□ -2.02
PTPRC-205ENST00000391970 PEX11AO75192 247 aa2.42□□□□□ -2.02
PTPRC-205ENST00000391970 PIGRP01833 764 aa2.42□□□□□ -2.02
PTPRC-205ENST00000391970 CHRNA1P02708 482 aa2.42□□□□□ -2.02
PTPRC-205ENST00000391970 IDO1P14902 403 aa2.42□□□□□ -2.02
PTPRC-205ENST00000391970 UQCRBP14927 111 aa2.42□□□□□ -2.02
PTPRC-205ENST00000391970 HMGCLP35914 325 aa2.42□□□□□ -2.02
PTPRC-205ENST00000391970 MAGEA9P43362 315 aa2.42□□□□□ -2.02
PTPRC-205ENST00000391970 METAP1P53582 386 aa2.42□□□□□ -2.02
PTPRC-205ENST00000391970 HMGCS2P54868 508 aa2.42□□□□□ -2.02
PTPRC-205ENST00000391970 RPS6P62753 249 aaKnown RBP2.42□□□□□ -2.02
PTPRC-205ENST00000391970 KLHL30Q0D2K2 578 aa2.42□□□□□ -2.02
PTPRC-205ENST00000391970 TRIP10Q15642 601 aa2.42□□□□□ -2.02
PTPRC-205ENST00000391970 UBE2V2Q15819 145 aa2.42□□□□□ -2.02
PTPRC-205ENST00000391970 HIGD2BQ4VC39 106 aa2.42□□□□□ -2.02
PTPRC-205ENST00000391970 EIPR1Q53HC9 387 aa2.42□□□□□ -2.02
PTPRC-205ENST00000391970 ZNF311Q5JNZ3 666 aa2.42□□□□□ -2.02
PTPRC-205ENST00000391970 C16orf87Q6PH81 154 aa2.42□□□□□ -2.02
PTPRC-205ENST00000391970 CBLN3Q6UW01 205 aa2.42□□□□□ -2.02
PTPRC-205ENST00000391970 ZNF600Q6ZNG1 722 aa2.42□□□□□ -2.02
PTPRC-205ENST00000391970 CENPLQ8N0S6 344 aaPredicted RBP2.42□□□□□ -2.02
PTPRC-205ENST00000391970 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.42□□□□□ -2.02
PTPRC-205ENST00000391970 FADS6Q8N9I5 356 aa2.42□□□□□ -2.02
PTPRC-205ENST00000391970 OR5AU1Q8NGC0 362 aa2.42□□□□□ -2.02
PTPRC-205ENST00000391970 SLC35B4Q969S0 331 aa2.42□□□□□ -2.02
PTPRC-205ENST00000391970 UPRTQ96BW1 309 aa2.42□□□□□ -2.02
PTPRC-205ENST00000391970 ZBED6CLQ96FA7 236 aaPredicted RBP2.42□□□□□ -2.02
PTPRC-205ENST00000391970 HPDLQ96IR7 371 aa2.42□□□□□ -2.02
PTPRC-205ENST00000391970 ELMO2Q96JJ3 720 aa2.42□□□□□ -2.02
PTPRC-205ENST00000391970 FOXN4Q96NZ1 517 aa2.42□□□□□ -2.02
PTPRC-205ENST00000391970 WDR76Q9H967 626 aa2.42□□□□□ -2.02
PTPRC-205ENST00000391970 MEPEQ9NQ76 525 aaPredicted RBP2.42□□□□□ -2.02
PTPRC-205ENST00000391970 TIGARQ9NQ88 270 aa2.42□□□□□ -2.02
PTPRC-205ENST00000391970 FAM120CQ9NX05 1096 aaKnown RBP2.42□□□□□ -2.02
PTPRC-205ENST00000391970 SENP1Q9P0U3 644 aa2.42□□□□□ -2.02
PTPRC-205ENST00000391970 GALPQ9UBC7 116 aa2.42□□□□□ -2.02
PTPRC-205ENST00000391970 PCSK1NQ9UHG2 260 aa2.42□□□□□ -2.02
PTPRC-205ENST00000391970 XPO7Q9UIA9 1087 aaKnown RBP2.42□□□□□ -2.02
PTPRC-205ENST00000391970 SH3BGRL2Q9UJC5 107 aa2.42□□□□□ -2.02
PTPRC-205ENST00000391970 EIF3LQ9Y262 564 aaKnown RBP2.42□□□□□ -2.02
PTPRC-205ENST00000391970 AP4B1Q9Y6B7 739 aa2.42□□□□□ -2.02
PTPRC-205ENST00000391970 V9GYY5 206 aaPredicted RBP2.42□□□□□ -2.02
PTPRC-205ENST00000391970 GRIN2DO15399 1336 aa2.42□□□□□ -2.02
PTPRC-205ENST00000391970 GON4LQ3T8J9 2241 aa2.41□□□□□ -2.02
PTPRC-205ENST00000391970 SYNMO15061 1565 aa2.41□□□□□ -2.02
PTPRC-205ENST00000391970 DNMBPQ6XZF7 1577 aa2.41□□□□□ -2.02
PTPRC-205ENST00000391970 METP08581 1390 aa2.41□□□□□ -2.02
PTPRC-205ENST00000391970 KTN1Q86UP2 1357 aaKnown RBP2.41□□□□□ -2.02
PTPRC-205ENST00000391970 TNIKQ9UKE5 1360 aa2.41□□□□□ -2.02
PTPRC-205ENST00000391970 A0A087WWV3 80 aa2.41□□□□□ -2.02
PTPRC-205ENST00000391970 TRIM49BA6NDI0 452 aa2.41□□□□□ -2.02
PTPRC-205ENST00000391970 TRIM64CA6NLI5 447 aa2.41□□□□□ -2.02
PTPRC-205ENST00000391970 SAP18O00422 153 aaKnown RBP2.41□□□□□ -2.02
PTPRC-205ENST00000391970 PPIHO43447 177 aaKnown RBP2.41□□□□□ -2.02
PTPRC-205ENST00000391970 SRPX2O60687 465 aaPredicted RBP2.41□□□□□ -2.02
PTPRC-205ENST00000391970 JCHAINP01591 159 aa2.41□□□□□ -2.02
PTPRC-205ENST00000391970 IGFBP1P08833 259 aaPredicted RBP2.41□□□□□ -2.02
PTPRC-205ENST00000391970 ANXA3P12429 323 aa2.41□□□□□ -2.02
PTPRC-205ENST00000391970 SDC1P18827 310 aa2.41□□□□□ -2.02
PTPRC-205ENST00000391970 CCNCP24863 283 aa2.41□□□□□ -2.02
PTPRC-205ENST00000391970 MSNP26038 577 aaKnown RBP2.41□□□□□ -2.02
PTPRC-205ENST00000391970 HTR2AP28223 471 aa2.41□□□□□ -2.02
PTPRC-205ENST00000391970 NF2P35240 595 aa2.41□□□□□ -2.02
PTPRC-205ENST00000391970 PTGER3P43115 390 aa2.41□□□□□ -2.02
PTPRC-205ENST00000391970 OR1D4P47884 311 aa2.41□□□□□ -2.02
PTPRC-205ENST00000391970 RPL34P49207 117 aaKnown RBP2.41□□□□□ -2.02
PTPRC-205ENST00000391970 EMDP50402 254 aa2.41□□□□□ -2.02
PTPRC-205ENST00000391970 ARHGDIBP52566 201 aa2.41□□□□□ -2.02
PTPRC-205ENST00000391970 KRTAP10-6P60371 365 aaPredicted RBP2.41□□□□□ -2.02
PTPRC-205ENST00000391970 OVGP1Q12889 678 aa2.41□□□□□ -2.02
PTPRC-205ENST00000391970 CCDC14Q49A88 953 aa2.41□□□□□ -2.02
PTPRC-205ENST00000391970 LINC01620Q4KN68 170 aa2.41□□□□□ -2.02
PTPRC-205ENST00000391970 CCDC122Q5T0U0 273 aa2.41□□□□□ -2.02
PTPRC-205ENST00000391970 LGSNQ5TDP6 509 aa2.41□□□□□ -2.02
PTPRC-205ENST00000391970 SLX4IPQ5VYV7 408 aa2.41□□□□□ -2.02
PTPRC-205ENST00000391970 SULT1C3Q6IMI6 304 aa2.41□□□□□ -2.02
PTPRC-205ENST00000391970 CENPUQ71F23 418 aa2.41□□□□□ -2.02
PTPRC-205ENST00000391970 CCDC80Q76M96 950 aa2.41□□□□□ -2.02
PTPRC-205ENST00000391970 SERINC5Q86VE9 423 aa2.41□□□□□ -2.02
PTPRC-205ENST00000391970 PARGQ86W56 976 aa2.41□□□□□ -2.02
PTPRC-205ENST00000391970 ERICH1Q86X53 443 aa2.41□□□□□ -2.02
PTPRC-205ENST00000391970 KRT222Q8N1A0 295 aa2.41□□□□□ -2.02
PTPRC-205ENST00000391970 STKLD1Q8NE28 680 aa2.41□□□□□ -2.02
PTPRC-205ENST00000391970 AGAP11Q8TF27 550 aa2.41□□□□□ -2.02
PTPRC-205ENST00000391970 TADA1Q96BN2 335 aa2.41□□□□□ -2.02
PTPRC-205ENST00000391970 DTNBP1Q96EV8 351 aa2.41□□□□□ -2.02
PTPRC-205ENST00000391970 RANBP9Q96S59 729 aa2.41□□□□□ -2.02
PTPRC-205ENST00000391970 APOL2Q9BQE5 337 aa2.41□□□□□ -2.02
PTPRC-205ENST00000391970 CRACR2AQ9BSW2 395 aa2.41□□□□□ -2.02
PTPRC-205ENST00000391970 SLC25A51Q9H1U9 297 aa2.41□□□□□ -2.02
PTPRC-205ENST00000391970 COG4Q9H9E3 785 aa2.41□□□□□ -2.02
PTPRC-205ENST00000391970 CALHM2Q9HA72 323 aa2.41□□□□□ -2.02
PTPRC-205ENST00000391970 POLD4Q9HCU8 107 aa2.41□□□□□ -2.02
PTPRC-205ENST00000391970 IMPAD1Q9NX62 359 aa2.41□□□□□ -2.02
PTPRC-205ENST00000391970 RDH8Q9NYR8 311 aa2.41□□□□□ -2.02
PTPRC-205ENST00000391970 SPATA7Q9P0W8 599 aa2.41□□□□□ -2.02
PTPRC-205ENST00000391970 PRODH2Q9UF12 536 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms