RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 NTMQ9P121 344 aa11.73□□□□□ -0.53
RPAIN-202ENST00000381208 AP4B1Q9Y6B7 739 aa11.73□□□□□ -0.53
RPAIN-202ENST00000381208 OR2M5A3KFT3 312 aa11.72□□□□□ -0.53
RPAIN-202ENST00000381208 TMEM114B3SHH9 223 aa11.72□□□□□ -0.53
RPAIN-202ENST00000381208 ALG1L2C9J202 215 aa11.72□□□□□ -0.53
RPAIN-202ENST00000381208 EMC8O43402 210 aa11.72□□□□□ -0.53
RPAIN-202ENST00000381208 NME6O75414 186 aaPredicted RBP11.72□□□□□ -0.53
RPAIN-202ENST00000381208 NKX2-2O95096 273 aa11.72□□□□□ -0.53
RPAIN-202ENST00000381208 UTS2O95399 124 aa11.72□□□□□ -0.53
RPAIN-202ENST00000381208 TGM6O95932 706 aa11.72□□□□□ -0.53
RPAIN-202ENST00000381208 HRGP04196 525 aa11.72□□□□□ -0.53
RPAIN-202ENST00000381208 SHBGP04278 402 aa11.72□□□□□ -0.53
RPAIN-202ENST00000381208 FGF4P08620 206 aa11.72□□□□□ -0.53
RPAIN-202ENST00000381208 ZNF17P17021 662 aa11.72□□□□□ -0.53
RPAIN-202ENST00000381208 MAPK1P28482 360 aa11.72□□□□□ -0.53
RPAIN-202ENST00000381208 HSPB3Q12988 150 aa11.72□□□□□ -0.53
RPAIN-202ENST00000381208 LRIG3Q6UXM1 1119 aa11.72□□□□□ -0.53
RPAIN-202ENST00000381208 TREML4Q6UXN2 200 aa11.72□□□□□ -0.53
RPAIN-202ENST00000381208 MISPQ8IVT2 679 aa11.72□□□□□ -0.53
RPAIN-202ENST00000381208 NATD1Q8N6N6 113 aa11.72□□□□□ -0.53
RPAIN-202ENST00000381208 OR6Y1Q8NGX8 325 aa11.72□□□□□ -0.53
RPAIN-202ENST00000381208 GPR151Q8TDV0 419 aa11.72□□□□□ -0.53
RPAIN-202ENST00000381208 DUSP19Q8WTR2 217 aa11.72□□□□□ -0.53
RPAIN-202ENST00000381208 PLEKHF2Q9H8W4 249 aa11.72□□□□□ -0.53
RPAIN-202ENST00000381208 FANCFQ9NPI8 374 aa11.72□□□□□ -0.53
RPAIN-202ENST00000381208 ZNF226Q9NYT6 803 aa11.72□□□□□ -0.53
RPAIN-202ENST00000381208 MED11Q9P086 117 aa11.72□□□□□ -0.53
RPAIN-202ENST00000381208 SH3BP4Q9P0V3 963 aa11.72□□□□□ -0.53
RPAIN-202ENST00000381208 NPHS1O60500 1241 aa11.71□□□□□ -0.53
RPAIN-202ENST00000381208 ATE1O95260 518 aa11.71□□□□□ -0.53
RPAIN-202ENST00000381208 ANGPTL1O95841 491 aa11.71□□□□□ -0.53
RPAIN-202ENST00000381208 CD8BP10966 210 aa11.71□□□□□ -0.53
RPAIN-202ENST00000381208 KLK2P20151 261 aa11.71□□□□□ -0.53
RPAIN-202ENST00000381208 SERPINB5P36952 375 aa11.71□□□□□ -0.53
RPAIN-202ENST00000381208 MAP3K8P41279 467 aa11.71□□□□□ -0.53
RPAIN-202ENST00000381208 FRKP42685 505 aaPredicted RBP11.71□□□□□ -0.53
RPAIN-202ENST00000381208 RFX3P48380 749 aa11.71□□□□□ -0.53
RPAIN-202ENST00000381208 SERPINB4P48594 390 aa11.71□□□□□ -0.53
RPAIN-202ENST00000381208 STX5Q13190 355 aa11.71□□□□□ -0.53
RPAIN-202ENST00000381208 PDE7AQ13946 482 aa11.71□□□□□ -0.53
RPAIN-202ENST00000381208 MLC1Q15049 377 aa11.71□□□□□ -0.53
RPAIN-202ENST00000381208 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.71□□□□□ -0.53
RPAIN-202ENST00000381208 PRSS53Q2L4Q9 553 aa11.71□□□□□ -0.53
RPAIN-202ENST00000381208 DEFB113Q30KQ7 82 aa11.71□□□□□ -0.53
RPAIN-202ENST00000381208 KRTAP21-3Q3LHN1 58 aa11.71□□□□□ -0.53
RPAIN-202ENST00000381208 CLEC6AQ6EIG7 209 aa11.71□□□□□ -0.53
RPAIN-202ENST00000381208 Q6ZSR9 355 aa11.71□□□□□ -0.53
RPAIN-202ENST00000381208 ZNF551Q7Z340 670 aaPredicted RBP11.71□□□□□ -0.53
RPAIN-202ENST00000381208 MED12LQ86YW9 2145 aa11.71□□□□□ -0.53
RPAIN-202ENST00000381208 C10orf107Q8IVU9 208 aa11.71□□□□□ -0.53
RPAIN-202ENST00000381208 GSPT2Q8IYD1 628 aaKnown RBP11.71□□□□□ -0.53
RPAIN-202ENST00000381208 UBQLNLQ8IYU4 475 aa11.71□□□□□ -0.53
RPAIN-202ENST00000381208 METTL25Q8N6Q8 603 aa11.71□□□□□ -0.53
RPAIN-202ENST00000381208 CNEP1R1Q8N9A8 125 aa11.71□□□□□ -0.53
RPAIN-202ENST00000381208 NUP43Q8NFH3 380 aa11.71□□□□□ -0.53
RPAIN-202ENST00000381208 STARD4Q96DR4 205 aa11.71□□□□□ -0.53
RPAIN-202ENST00000381208 EGLN2Q96KS0 407 aa11.71□□□□□ -0.53
RPAIN-202ENST00000381208 PPP3R2Q96LZ3 170 aa11.71□□□□□ -0.53
RPAIN-202ENST00000381208 MS4A4EQ96PG1 132 aa11.71□□□□□ -0.53
RPAIN-202ENST00000381208 GATA5Q9BWX5 397 aaPredicted RBP11.71□□□□□ -0.53
RPAIN-202ENST00000381208 LIME1Q9H400 295 aa11.71□□□□□ -0.53
RPAIN-202ENST00000381208 RNF122Q9H9V4 155 aa11.71□□□□□ -0.53
RPAIN-202ENST00000381208 NEUROD4Q9HD90 331 aa11.71□□□□□ -0.53
RPAIN-202ENST00000381208 ZNF337Q9Y3M9 751 aa11.71□□□□□ -0.53
RPAIN-202ENST00000381208 KIAA1549Q9HCM3 1950 aa11.7□□□□□ -0.54
RPAIN-202ENST00000381208 SMIM23A6NLE4 172 aa11.7□□□□□ -0.54
RPAIN-202ENST00000381208 B4DXG7 233 aa11.7□□□□□ -0.54
RPAIN-202ENST00000381208 NDUFB5O43674 189 aa11.7□□□□□ -0.54
RPAIN-202ENST00000381208 SMNDC1O75940 238 aaKnown RBP eCLIP11.7□□□□□ -0.54
RPAIN-202ENST00000381208 HPGDP15428 266 aa11.7□□□□□ -0.54
RPAIN-202ENST00000381208 SDC1P18827 310 aa11.7□□□□□ -0.54
RPAIN-202ENST00000381208 TBXA2RP21731 343 aa11.7□□□□□ -0.54
RPAIN-202ENST00000381208 TCEA1P23193 301 aaKnown RBP11.7□□□□□ -0.54
RPAIN-202ENST00000381208 CPOXP36551 454 aa11.7□□□□□ -0.54
RPAIN-202ENST00000381208 HPCAL1P37235 193 aa11.7□□□□□ -0.54
RPAIN-202ENST00000381208 CD79BP40259 229 aa11.7□□□□□ -0.54
RPAIN-202ENST00000381208 PRIM2P49643 509 aa11.7□□□□□ -0.54
RPAIN-202ENST00000381208 RPL38P63173 70 aaKnown RBP11.7□□□□□ -0.54
RPAIN-202ENST00000381208 PCLAFQ15004 111 aa11.7□□□□□ -0.54
RPAIN-202ENST00000381208 SGCBQ16585 318 aa11.7□□□□□ -0.54
RPAIN-202ENST00000381208 KANK2Q63ZY3 851 aa11.7□□□□□ -0.54
RPAIN-202ENST00000381208 MARCH3Q86UD3 253 aa11.7□□□□□ -0.54
RPAIN-202ENST00000381208 WDR75Q8IWA0 830 aaKnown RBP11.7□□□□□ -0.54
RPAIN-202ENST00000381208 C4orf33Q8N1A6 199 aa11.7□□□□□ -0.54
RPAIN-202ENST00000381208 ACTRT2Q8TDY3 377 aa11.7□□□□□ -0.54
RPAIN-202ENST00000381208 EPS8L3Q8TE67 593 aaKnown RBP11.7□□□□□ -0.54
RPAIN-202ENST00000381208 ZBTB8AQ96BR9 441 aa11.7□□□□□ -0.54
RPAIN-202ENST00000381208 PGM2Q96G03 612 aa11.7□□□□□ -0.54
RPAIN-202ENST00000381208 APOPT1Q96IL0 206 aa11.7□□□□□ -0.54
RPAIN-202ENST00000381208 ZNF845Q96IR2 970 aaPredicted RBP11.7□□□□□ -0.54
RPAIN-202ENST00000381208 TSSK3Q96PN8 268 aa11.7□□□□□ -0.54
RPAIN-202ENST00000381208 FAM111AQ96PZ2 611 aa11.7□□□□□ -0.54
RPAIN-202ENST00000381208 PINK1Q9BXM7 581 aa11.7□□□□□ -0.54
RPAIN-202ENST00000381208 TNFRSF12AQ9NP84 129 aa11.7□□□□□ -0.54
RPAIN-202ENST00000381208 EQTNQ9NQ60 294 aa11.7□□□□□ -0.54
RPAIN-202ENST00000381208 BEX4Q9NWD9 120 aaPredicted RBP11.7□□□□□ -0.54
RPAIN-202ENST00000381208 TESMINQ9Y4I5 508 aa11.7□□□□□ -0.54
RPAIN-202ENST00000381208 DNAJC15Q9Y5T4 150 aa11.7□□□□□ -0.54
RPAIN-202ENST00000381208 ACANP16112 2415 aa11.7□□□□□ -0.54
RPAIN-202ENST00000381208 C7orf72A4D263 438 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms