RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 OR6C76A6NM76 312 aa4.65□□□□□ -1.66
PCDH9-201ENST00000377861 ATXN1LP0C7T5 689 aaKnown RBP4.65□□□□□ -1.66
PCDH9-201ENST00000377861 SLC6A1P30531 599 aa4.65□□□□□ -1.66
PCDH9-201ENST00000377861 DNASE1L1P49184 302 aa4.65□□□□□ -1.66
PCDH9-201ENST00000377861 CD200R1LQ6Q8B3 271 aa4.65□□□□□ -1.66
PCDH9-201ENST00000377861 SMCO4Q9NRQ5 59 aa4.65□□□□□ -1.66
PCDH9-201ENST00000377861 V9GY05 133 aa4.65□□□□□ -1.66
PCDH9-201ENST00000377861 STEAP2Q8NFT2 490 aa4.65□□□□□ -1.66
PCDH9-201ENST00000377861 ARHGAP9Q9BRR9 750 aa4.65□□□□□ -1.66
PCDH9-201ENST00000377861 TSSK6Q9BXA6 273 aa4.65□□□□□ -1.66
PCDH9-201ENST00000377861 POT1Q9NUX5 634 aa4.65□□□□□ -1.66
PCDH9-201ENST00000377861 KLHL13Q9P2N7 655 aa4.65□□□□□ -1.66
PCDH9-201ENST00000377861 CAPN3P20807 821 aa4.65□□□□□ -1.66
PCDH9-201ENST00000377861 UBXN11Q5T124 520 aa4.65□□□□□ -1.66
PCDH9-201ENST00000377861 ZNF584Q8IVC4 421 aa4.65□□□□□ -1.66
PCDH9-201ENST00000377861 LILRA2Q8N149 483 aa4.65□□□□□ -1.66
PCDH9-201ENST00000377861 SIDT2Q8NBJ9 832 aaKnown RBP4.65□□□□□ -1.66
PCDH9-201ENST00000377861 NPEPPSL1A6NEC2 478 aa4.65□□□□□ -1.66
PCDH9-201ENST00000377861 DIRAS1O95057 198 aa4.65□□□□□ -1.66
PCDH9-201ENST00000377861 TSPAN5P62079 268 aa4.65□□□□□ -1.66
PCDH9-201ENST00000377861 SLC25A43Q8WUT9 341 aaPredicted RBP4.65□□□□□ -1.66
PCDH9-201ENST00000377861 SLC35G5Q96KT7 338 aa4.65□□□□□ -1.66
PCDH9-201ENST00000377861 MRGPRX1Q96LB2 322 aa4.65□□□□□ -1.66
PCDH9-201ENST00000377861 RBM38Q9H0Z9 239 aaKnown RBP4.65□□□□□ -1.66
PCDH9-201ENST00000377861 A0A0G2JMP0 313 aa4.65□□□□□ -1.67
PCDH9-201ENST00000377861 SLC16A8O95907 504 aa4.65□□□□□ -1.67
PCDH9-201ENST00000377861 ADH7P40394 386 aa4.65□□□□□ -1.67
PCDH9-201ENST00000377861 OR4M2Q8NGB6 313 aa4.65□□□□□ -1.67
PCDH9-201ENST00000377861 GNPNAT1Q96EK6 184 aaPredicted RBP4.65□□□□□ -1.67
PCDH9-201ENST00000377861 ARL5AQ9Y689 179 aa4.65□□□□□ -1.67
PCDH9-201ENST00000377861 HOXC11O43248 304 aaPredicted RBP4.65□□□□□ -1.67
PCDH9-201ENST00000377861 ZNF286BP0CG31 522 aa4.65□□□□□ -1.67
PCDH9-201ENST00000377861 PXKQ7Z7A4 578 aa4.65□□□□□ -1.67
PCDH9-201ENST00000377861 DBF4BQ8NFT6 615 aa4.65□□□□□ -1.67
PCDH9-201ENST00000377861 MSLNLQ96KJ4 702 aa4.65□□□□□ -1.67
PCDH9-201ENST00000377861 SLIRPQ9GZT3 109 aaKnown RBP4.65□□□□□ -1.67
PCDH9-201ENST00000377861 HHLA2Q9UM44 414 aa4.65□□□□□ -1.67
PCDH9-201ENST00000377861 SCO2O43819 266 aa4.65□□□□□ -1.67
PCDH9-201ENST00000377861 SLC25A1P53007 311 aa4.65□□□□□ -1.67
PCDH9-201ENST00000377861 FAM217AQ8IXS0 508 aa4.65□□□□□ -1.67
PCDH9-201ENST00000377861 TSSK2Q96PF2 358 aa4.65□□□□□ -1.67
PCDH9-201ENST00000377861 TMEM150CB9EJG8 249 aa4.65□□□□□ -1.67
PCDH9-201ENST00000377861 RNASE10Q5GAN6 216 aaKnown RBP4.65□□□□□ -1.67
PCDH9-201ENST00000377861 BTN2A1Q7KYR7 527 aa4.65□□□□□ -1.67
PCDH9-201ENST00000377861 EIF3KQ9UBQ5 218 aaKnown RBP4.65□□□□□ -1.67
PCDH9-201ENST00000377861 KIF20BQ96Q89 1820 aa4.65□□□□□ -1.67
PCDH9-201ENST00000377861 FAM230AA0A1W2PPH8 454 aa4.65□□□□□ -1.67
PCDH9-201ENST00000377861 A8MUI8 341 aa4.65□□□□□ -1.67
PCDH9-201ENST00000377861 CTSAP10619 480 aa4.65□□□□□ -1.67
PCDH9-201ENST00000377861 DNASE1P24855 282 aa4.65□□□□□ -1.67
PCDH9-201ENST00000377861 CSNK1EP49674 416 aaKnown RBP4.65□□□□□ -1.67
PCDH9-201ENST00000377861 SLC5A12Q1EHB4 618 aa4.65□□□□□ -1.67
PCDH9-201ENST00000377861 ACOT7LQ6ZUV0 252 aa4.65□□□□□ -1.67
PCDH9-201ENST00000377861 OSTM1Q86WC4 334 aa4.65□□□□□ -1.67
PCDH9-201ENST00000377861 LMNTD1Q8N9Z9 388 aa4.65□□□□□ -1.67
PCDH9-201ENST00000377861 MCHR1Q99705 422 aa4.65□□□□□ -1.67
PCDH9-201ENST00000377861 NRIP3Q9NQ35 241 aa4.65□□□□□ -1.67
PCDH9-201ENST00000377861 IFT172Q9UG01 1749 aa4.65□□□□□ -1.67
PCDH9-201ENST00000377861 CXorf65A6NEN9 183 aa4.65□□□□□ -1.67
PCDH9-201ENST00000377861 FBXW4P57775 412 aa4.65□□□□□ -1.67
PCDH9-201ENST00000377861 ZNF266Q14584 549 aa4.65□□□□□ -1.67
PCDH9-201ENST00000377861 CXorf57Q6NSI4 855 aaKnown RBP4.65□□□□□ -1.67
PCDH9-201ENST00000377861 CRTC1Q6UUV9 634 aa4.65□□□□□ -1.67
PCDH9-201ENST00000377861 MRPL43Q8N983 215 aaKnown RBP4.65□□□□□ -1.67
PCDH9-201ENST00000377861 HGDQ93099 445 aa4.65□□□□□ -1.67
PCDH9-201ENST00000377861 UCK1Q9HA47 277 aa4.65□□□□□ -1.67
PCDH9-201ENST00000377861 APMAPQ9HDC9 416 aa4.65□□□□□ -1.67
PCDH9-201ENST00000377861 CMC2Q9NRP2 79 aa4.65□□□□□ -1.67
PCDH9-201ENST00000377861 FIGNL2A6NMB9 653 aa4.65□□□□□ -1.67
PCDH9-201ENST00000377861 ZNF865P0CJ78 1059 aaPredicted RBP4.65□□□□□ -1.67
PCDH9-201ENST00000377861 SBSNQ6UWP8 590 aa4.65□□□□□ -1.67
PCDH9-201ENST00000377861 GKN2Q86XP6 184 aa4.65□□□□□ -1.67
PCDH9-201ENST00000377861 KLHDC9Q8NEP7 349 aa4.65□□□□□ -1.67
PCDH9-201ENST00000377861 EIF2B4Q9UI10 523 aaKnown RBP4.65□□□□□ -1.67
PCDH9-201ENST00000377861 U3KQV3 271 aa4.65□□□□□ -1.67
PCDH9-201ENST00000377861 FFAR3O14843 346 aa4.65□□□□□ -1.67
PCDH9-201ENST00000377861 GPR42O15529 346 aa4.65□□□□□ -1.67
PCDH9-201ENST00000377861 PDYNP01213 254 aa4.65□□□□□ -1.67
PCDH9-201ENST00000377861 ATP1B1P05026 303 aa4.65□□□□□ -1.67
PCDH9-201ENST00000377861 AKAIN1P0CW23 69 aa4.65□□□□□ -1.67
PCDH9-201ENST00000377861 LRRC26Q2I0M4 334 aa4.65□□□□□ -1.67
PCDH9-201ENST00000377861 EIF4E3Q8N5X7 224 aaKnown RBP4.65□□□□□ -1.67
PCDH9-201ENST00000377861 C16orf78Q8WTQ4 265 aa4.65□□□□□ -1.67
PCDH9-201ENST00000377861 SCARB1Q8WTV0 552 aa4.65□□□□□ -1.67
PCDH9-201ENST00000377861 OR1F2PQ96R84 312 aa4.65□□□□□ -1.67
PCDH9-201ENST00000377861 CLSTN3Q9BQT9 956 aa4.65□□□□□ -1.67
PCDH9-201ENST00000377861 DPH7Q9BTV6 452 aa4.65□□□□□ -1.67
PCDH9-201ENST00000377861 COX19Q49B96 90 aa4.65□□□□□ -1.67
PCDH9-201ENST00000377861 WBP2NLQ6ICG8 309 aa4.65□□□□□ -1.67
PCDH9-201ENST00000377861 MYOTQ9UBF9 498 aa4.65□□□□□ -1.67
PCDH9-201ENST00000377861 SIX3O95343 332 aaPredicted RBP4.65□□□□□ -1.67
PCDH9-201ENST00000377861 MGMTP16455 207 aa4.65□□□□□ -1.67
PCDH9-201ENST00000377861 ALAS2P22557 587 aa4.65□□□□□ -1.67
PCDH9-201ENST00000377861 DOC2BQ14184 412 aa4.65□□□□□ -1.67
PCDH9-201ENST00000377861 P2RY14Q15391 338 aa4.65□□□□□ -1.67
PCDH9-201ENST00000377861 GPAT4Q86UL3 456 aa4.65□□□□□ -1.67
PCDH9-201ENST00000377861 OR6T1Q8NGN1 323 aa4.65□□□□□ -1.67
PCDH9-201ENST00000377861 HSPBAP1Q96EW2 488 aa4.65□□□□□ -1.67
PCDH9-201ENST00000377861 ENAMQ9NRM1 1142 aa4.65□□□□□ -1.67
PCDH9-201ENST00000377861 SDC1P18827 310 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms