RNA–Protein interactions for RNA: ENST00000375759.7

SPEN-201, Transcript of spen family transcriptional repressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPEN, Length 12,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-201ENST00000375759 ZNF860A6NHJ4 632 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 HNRNPKP61978 463 aaKnown RBP eCLIP9.31□□□□□ -0.926e-16■■■■□ 26.1
SPEN-201ENST00000375759 DLX2Q07687 328 aaPredicted RBP9.31□□□□□ -0.92
SPEN-201ENST00000375759 ZNF679Q8IYX0 411 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 LILRB4Q8NHJ6 448 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 C16orf78Q8WTQ4 265 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 GATA6Q92908 595 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 ACTR10Q9NZ32 417 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 OR1A2Q9Y585 309 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 INSL5Q9Y5Q6 135 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 D6RAR5 112 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 EGFP01133 1207 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 SERPINE2P07093 398 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 FGF4P08620 206 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 MSX1P28360 303 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 CRABP1P29762 137 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 HOXA9P31269 272 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 MMP12P39900 470 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 SUOXP51687 545 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 SLC22A25Q6T423 547 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 IQCF1Q8N6M8 205 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 Q8N9G6 341 aaPredicted RBP9.31□□□□□ -0.92
SPEN-201ENST00000375759 SMAP2Q8WU79 429 aaPredicted RBP9.31□□□□□ -0.92
SPEN-201ENST00000375759 FOXRED1Q96CU9 486 aaPredicted RBP9.31□□□□□ -0.92
SPEN-201ENST00000375759 PINK1Q9BXM7 581 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 GPATCH2Q9NW75 528 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 ARGFXA6NJG6 315 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 TOR1AO14656 332 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 ARPC1BO15143 372 aaKnown RBP9.31□□□□□ -0.92
SPEN-201ENST00000375759 SERPINA7P05543 415 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 GLO1Q04760 184 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 POU4F3Q15319 338 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 SPRYD7Q5W111 196 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 METAP1DQ6UB28 335 aaPredicted RBP9.31□□□□□ -0.92
SPEN-201ENST00000375759 DTWD1Q8N5C7 304 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 A0A0D9SG52 128 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 LEFTY2O00292 366 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 NDUFB2O95178 105 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 RFPL4BQ6ZWI9 263 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 ZBED3Q96IU2 234 aaPredicted RBP9.31□□□□□ -0.92
SPEN-201ENST00000375759 SDHAF2Q9NX18 166 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 PCDHA9Q9Y5H5 950 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 HPGDSO60760 199 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 RAB3AP20336 220 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 CTXN1P60606 82 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 ELOAQ14241 798 aaKnown RBP9.31□□□□□ -0.92
SPEN-201ENST00000375759 SPARTQ8N0X7 666 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 SLC2A13Q96QE2 648 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 GORASP2Q9H8Y8 452 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 PRMT8Q9NR22 394 aaPredicted RBP9.31□□□□□ -0.92
SPEN-201ENST00000375759 THSD1Q9NS62 852 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 AK6Q9Y3D8 172 aaKnown RBP9.31□□□□□ -0.92
SPEN-201ENST00000375759 TMEM88BA6NKF7 163 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 KIAA0355O15063 1070 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 RAB6AP20340 208 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 TAS2R19P59542 299 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 ELAVL3Q14576 367 aaKnown RBP9.31□□□□□ -0.92
SPEN-201ENST00000375759 CLVS2Q5SYC1 327 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 RAET1LQ5VY80 246 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 OSTM1Q86WC4 334 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 KLHDC7BQ96G42 594 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 ZNF681Q96N22 645 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 ARHGAP39Q9C0H5 1083 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 SLC38A1Q9H2H9 487 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 RNASET2O00584 256 aaKnown RBP9.31□□□□□ -0.92
SPEN-201ENST00000375759 FXYD4P59646 89 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 OR5D14Q8NGL3 314 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 SLC2A12Q8TD20 617 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 SLC19A3Q9BZV2 496 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 NMNAT1Q9HAN9 279 aaPredicted RBP9.31□□□□□ -0.92
SPEN-201ENST00000375759 IL21RQ9HBE5 538 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 A0A0U1RQK1 487 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.31□□□□□ -0.92
SPEN-201ENST00000375759 MTMR11A4FU01 709 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 SGCEO43556 437 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 LCMT2O60294 686 aaKnown RBP9.31□□□□□ -0.92
SPEN-201ENST00000375759 GMPRP36959 345 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 RPS5P46782 204 aaKnown RBP9.31□□□□□ -0.92
SPEN-201ENST00000375759 ZNF691Q5VV52 312 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 BTF3L4Q96K17 158 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 B3GNT2Q9NY97 397 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 PIRO00625 290 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 AGPAT2O15120 278 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 ZNF43P17038 809 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 GIFP27352 417 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 DCTP40126 519 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 DAP3P51398 398 aaKnown RBP9.31□□□□□ -0.92
SPEN-201ENST00000375759 FOXK1P85037 733 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 C14orf80Q86SX3 495 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 OR9Q2Q8NGE9 314 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 GCDHQ92947 438 aaPredicted RBP9.31□□□□□ -0.92
SPEN-201ENST00000375759 TBC1D20Q96BZ9 403 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 SAMD8Q96LT4 415 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 DEFB126Q9BYW3 111 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 STRADBQ9C0K7 418 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 PDE7BQ9NP56 450 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 CCDC163A0A0D9SF12 145 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 IL1AP01583 271 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 SSTR4P31391 388 aa9.31□□□□□ -0.92
SPEN-201ENST00000375759 CNKSR3Q6P9H4 555 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms