RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 ZFP28Q8NHY6 868 aa12.84□□□□□ -0.35
NELFE-201ENST00000375425 FIG4Q92562 907 aa12.84□□□□□ -0.35
NELFE-201ENST00000375425 SLC9A6Q92581 669 aa12.84□□□□□ -0.35
NELFE-201ENST00000375425 STARD4Q96DR4 205 aa12.84□□□□□ -0.35
NELFE-201ENST00000375425 APOPT1Q96IL0 206 aa12.84□□□□□ -0.35
NELFE-201ENST00000375425 FAM111AQ96PZ2 611 aa12.84□□□□□ -0.35
NELFE-201ENST00000375425 MECRQ9BV79 373 aa12.84□□□□□ -0.35
NELFE-201ENST00000375425 ANKZF1Q9H8Y5 726 aa12.84□□□□□ -0.35
NELFE-201ENST00000375425 ACSS1Q9NUB1 689 aaPredicted RBP12.84□□□□□ -0.35
NELFE-201ENST00000375425 MKS1Q9NXB0 559 aa12.84□□□□□ -0.35
NELFE-201ENST00000375425 NTMQ9P121 344 aa12.84□□□□□ -0.35
NELFE-201ENST00000375425 SLC17A7Q9P2U7 560 aa12.84□□□□□ -0.35
NELFE-201ENST00000375425 C2CD3Q4AC94 2353 aa12.83□□□□□ -0.35
NELFE-201ENST00000375425 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.83□□□□□ -0.36
NELFE-201ENST00000375425 SH3D21A4FU49 640 aa12.83□□□□□ -0.36
NELFE-201ENST00000375425 H3BML4 177 aa12.83□□□□□ -0.36
NELFE-201ENST00000375425 MSTNO14793 375 aa12.83□□□□□ -0.36
NELFE-201ENST00000375425 SEC14L5O43304 696 aa12.83□□□□□ -0.36
NELFE-201ENST00000375425 NPHS1O60500 1241 aa12.83□□□□□ -0.36
NELFE-201ENST00000375425 SPAG7O75391 227 aa12.83□□□□□ -0.36
NELFE-201ENST00000375425 TNFRSF21O75509 655 aa12.83□□□□□ -0.36
NELFE-201ENST00000375425 SMNDC1O75940 238 aaKnown RBP eCLIP12.83□□□□□ -0.36
NELFE-201ENST00000375425 NKX2-2O95096 273 aa12.83□□□□□ -0.36
NELFE-201ENST00000375425 CRHP06850 196 aa12.83□□□□□ -0.36
NELFE-201ENST00000375425 BCKDHAP12694 445 aa12.83□□□□□ -0.36
NELFE-201ENST00000375425 CD99P14209 185 aa12.83□□□□□ -0.36
NELFE-201ENST00000375425 CLDN20P56880 219 aa12.83□□□□□ -0.36
NELFE-201ENST00000375425 FAM27E3Q08E93 113 aa12.83□□□□□ -0.36
NELFE-201ENST00000375425 GRAMD1BQ3KR37 738 aa12.83□□□□□ -0.36
NELFE-201ENST00000375425 GLYR1Q49A26 553 aaPredicted RBP12.83□□□□□ -0.36
NELFE-201ENST00000375425 SZRD1Q7Z422 152 aa12.83□□□□□ -0.36
NELFE-201ENST00000375425 HOMEZQ8IX15 550 aa12.83□□□□□ -0.36
NELFE-201ENST00000375425 SLC16A11Q8NCK7 471 aa12.83□□□□□ -0.36
NELFE-201ENST00000375425 CHDHQ8NE62 594 aaPredicted RBP12.83□□□□□ -0.36
NELFE-201ENST00000375425 OR4C3Q8NH37 302 aa12.83□□□□□ -0.36
NELFE-201ENST00000375425 TWIST2Q8WVJ9 160 aa12.83□□□□□ -0.36
NELFE-201ENST00000375425 GIMAP5Q96F15 307 aa12.83□□□□□ -0.36
NELFE-201ENST00000375425 TMUB1Q9BVT8 246 aa12.83□□□□□ -0.36
NELFE-201ENST00000375425 PINK1Q9BXM7 581 aa12.83□□□□□ -0.36
NELFE-201ENST00000375425 PLEKHF2Q9H8W4 249 aa12.83□□□□□ -0.36
NELFE-201ENST00000375425 EML4Q9HC35 981 aaKnown RBP12.83□□□□□ -0.36
NELFE-201ENST00000375425 NDRG3Q9UGV2 375 aa12.83□□□□□ -0.36
NELFE-201ENST00000375425 ABCA4P78363 2273 aa12.83□□□□□ -0.36
NELFE-201ENST00000375425 NF1P21359 2839 aa12.83□□□□□ -0.36
NELFE-201ENST00000375425 IGLV3-32A0A0A0MS00 114 aa12.82□□□□□ -0.36
NELFE-201ENST00000375425 SHISA8B8ZZ34 492 aa12.82□□□□□ -0.36
NELFE-201ENST00000375425 ALG1L2C9J202 215 aa12.82□□□□□ -0.36
NELFE-201ENST00000375425 CASKO14936 926 aa12.82□□□□□ -0.36
NELFE-201ENST00000375425 PIP5K1BO14986 540 aa12.82□□□□□ -0.36
NELFE-201ENST00000375425 EMC8O43402 210 aa12.82□□□□□ -0.36
NELFE-201ENST00000375425 NDUFB5O43674 189 aa12.82□□□□□ -0.36
NELFE-201ENST00000375425 KCNK2O95069 426 aa12.82□□□□□ -0.36
NELFE-201ENST00000375425 HRGP04196 525 aa12.82□□□□□ -0.36
NELFE-201ENST00000375425 NUDT17P0C025 328 aa12.82□□□□□ -0.36
NELFE-201ENST00000375425 ACP2P11117 423 aa12.82□□□□□ -0.36
NELFE-201ENST00000375425 EFNA1P20827 205 aaPredicted RBP12.82□□□□□ -0.36
NELFE-201ENST00000375425 CPOXP36551 454 aa12.82□□□□□ -0.36
NELFE-201ENST00000375425 KIR2DL2P43627 348 aaPredicted RBP12.82□□□□□ -0.36
NELFE-201ENST00000375425 ASMTP46597 345 aa12.82□□□□□ -0.36
NELFE-201ENST00000375425 POU4F3Q15319 338 aa12.82□□□□□ -0.36
NELFE-201ENST00000375425 VWA1Q6PCB0 445 aa12.82□□□□□ -0.36
NELFE-201ENST00000375425 BTLAQ7Z6A9 289 aa12.82□□□□□ -0.36
NELFE-201ENST00000375425 TGIF2LYQ8IUE0 185 aa12.82□□□□□ -0.36
NELFE-201ENST00000375425 RIBC1Q8N443 379 aaPredicted RBP12.82□□□□□ -0.36
NELFE-201ENST00000375425 FBXO30Q8TB52 745 aa12.82□□□□□ -0.36
NELFE-201ENST00000375425 FAM110BQ8TC76 370 aa12.82□□□□□ -0.36
NELFE-201ENST00000375425 AGR3Q8TD06 166 aa12.82□□□□□ -0.36
NELFE-201ENST00000375425 TCP10LQ8TDR4 215 aa12.82□□□□□ -0.36
NELFE-201ENST00000375425 SMPDL3BQ92485 455 aa12.82□□□□□ -0.36
NELFE-201ENST00000375425 MTERF3Q96E29 417 aa12.82□□□□□ -0.36
NELFE-201ENST00000375425 PGM2Q96G03 612 aa12.82□□□□□ -0.36
NELFE-201ENST00000375425 C16orf58Q96GQ5 468 aa12.82□□□□□ -0.36
NELFE-201ENST00000375425 ZNF845Q96IR2 970 aaPredicted RBP12.82□□□□□ -0.36
NELFE-201ENST00000375425 ALPK1Q96QP1 1244 aa12.82□□□□□ -0.36
NELFE-201ENST00000375425 RNF122Q9H9V4 155 aa12.82□□□□□ -0.36
NELFE-201ENST00000375425 GIMAP2Q9UG22 337 aa12.82□□□□□ -0.36
NELFE-201ENST00000375425 VDAC3Q9Y277 283 aa12.82□□□□□ -0.36
NELFE-201ENST00000375425 AP4B1Q9Y6B7 739 aa12.82□□□□□ -0.36
NELFE-201ENST00000375425 MED12LQ86YW9 2145 aa12.82□□□□□ -0.36
NELFE-201ENST00000375425 TMEM114B3SHH9 223 aa12.81□□□□□ -0.36
NELFE-201ENST00000375425 PEX11AO75192 247 aa12.81□□□□□ -0.36
NELFE-201ENST00000375425 GOSR1O95249 250 aa12.81□□□□□ -0.36
NELFE-201ENST00000375425 SLU7O95391 586 aaKnown RBP12.81□□□□□ -0.36
NELFE-201ENST00000375425 OXSR1O95747 527 aaPredicted RBP12.81□□□□□ -0.36
NELFE-201ENST00000375425 VSNL1P62760 191 aa12.81□□□□□ -0.36
NELFE-201ENST00000375425 IFFO1Q0D2I5 559 aa12.81□□□□□ -0.36
NELFE-201ENST00000375425 KEAP1Q14145 624 aa12.81□□□□□ -0.36
NELFE-201ENST00000375425 PON3Q15166 354 aa12.81□□□□□ -0.36
NELFE-201ENST00000375425 DUSP5Q16690 384 aa12.81□□□□□ -0.36
NELFE-201ENST00000375425 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.81□□□□□ -0.36
NELFE-201ENST00000375425 TMEM44Q2T9K0 475 aa12.81□□□□□ -0.36
NELFE-201ENST00000375425 MFSD12Q6NUT3 480 aa12.81□□□□□ -0.36
NELFE-201ENST00000375425 ZCCHC12Q6PEW1 402 aa12.81□□□□□ -0.36
NELFE-201ENST00000375425 FIGNL1Q6PIW4 674 aa12.81□□□□□ -0.36
NELFE-201ENST00000375425 ZNF474Q6S9Z5 364 aaPredicted RBP12.81□□□□□ -0.36
NELFE-201ENST00000375425 PAMR1Q6UXH9 720 aa12.81□□□□□ -0.36
NELFE-201ENST00000375425 LRIG3Q6UXM1 1119 aa12.81□□□□□ -0.36
NELFE-201ENST00000375425 ZCCHC23Q6ZST2 131 aa12.81□□□□□ -0.36
NELFE-201ENST00000375425 R3HCC1LQ7Z5L2 792 aaKnown RBP12.81□□□□□ -0.36
NELFE-201ENST00000375425 CAMKMTQ7Z624 323 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms