RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 IFT27Q9BW83 186 aa10.11□□□□□ -0.79
CXCL12-203ENST00000374429 HMG20AQ9NP66 347 aa10.11□□□□□ -0.79
CXCL12-203ENST00000374429 HELZP42694 1942 aaKnown RBP10.1□□□□□ -0.79
CXCL12-203ENST00000374429 A0A087WUU8 490 aa10.1□□□□□ -0.79
CXCL12-203ENST00000374429 CD8B2A6NJW9 211 aa10.1□□□□□ -0.79
CXCL12-203ENST00000374429 CDRT1O95170 752 aa10.1□□□□□ -0.79
CXCL12-203ENST00000374429 CLUP10909 449 aa10.1□□□□□ -0.79
CXCL12-203ENST00000374429 CD8BP10966 210 aa10.1□□□□□ -0.79
CXCL12-203ENST00000374429 BMP4P12644 408 aa10.1□□□□□ -0.79
CXCL12-203ENST00000374429 MAGEA2P43356 314 aa10.1□□□□□ -0.79
CXCL12-203ENST00000374429 MAPK14Q16539 360 aa10.1□□□□□ -0.79
CXCL12-203ENST00000374429 ENTPD8Q5MY95 495 aa10.1□□□□□ -0.79
CXCL12-203ENST00000374429 BORAQ6PGQ7 559 aa10.1□□□□□ -0.79
CXCL12-203ENST00000374429 ZNF765Q7L2R6 523 aa10.1□□□□□ -0.79
CXCL12-203ENST00000374429 PJA1Q8NG27 643 aa10.1□□□□□ -0.79
CXCL12-203ENST00000374429 OR2L8Q8NGY9 312 aa10.1□□□□□ -0.79
CXCL12-203ENST00000374429 PFN4Q8NHR9 129 aa10.1□□□□□ -0.79
CXCL12-203ENST00000374429 HRASLS5Q96KN8 279 aa10.1□□□□□ -0.79
CXCL12-203ENST00000374429 ZNF354BQ96LW1 612 aa10.1□□□□□ -0.79
CXCL12-203ENST00000374429 DHRS9Q9BPW9 319 aa10.1□□□□□ -0.79
CXCL12-203ENST00000374429 IER2Q9BTL4 223 aa10.1□□□□□ -0.79
CXCL12-203ENST00000374429 PRRG3Q9BZD7 231 aa10.1□□□□□ -0.79
CXCL12-203ENST00000374429 DZANK1Q9NVP4 752 aa10.1□□□□□ -0.79
CXCL12-203ENST00000374429 ENPP5Q9UJA9 477 aa10.1□□□□□ -0.79
CXCL12-203ENST00000374429 POLHQ9Y253 713 aa10.1□□□□□ -0.79
CXCL12-203ENST00000374429 TPRP12270 2363 aaKnown RBP10.1□□□□□ -0.79
CXCL12-203ENST00000374429 HRO43593 1189 aa10.1□□□□□ -0.79
CXCL12-203ENST00000374429 PLRG1O43660 514 aaKnown RBP10.1□□□□□ -0.79
CXCL12-203ENST00000374429 CLEC3AO75596 197 aa10.1□□□□□ -0.79
CXCL12-203ENST00000374429 PDE9AO76083 593 aa10.1□□□□□ -0.79
CXCL12-203ENST00000374429 SOX18P35713 384 aa10.1□□□□□ -0.79
CXCL12-203ENST00000374429 NRROSQ86YC3 692 aa10.1□□□□□ -0.79
CXCL12-203ENST00000374429 CYP4Z2PQ8N1L4 340 aa10.1□□□□□ -0.79
CXCL12-203ENST00000374429 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.1□□□□□ -0.79
CXCL12-203ENST00000374429 TBC1D20Q96BZ9 403 aa10.1□□□□□ -0.79
CXCL12-203ENST00000374429 LINC00615Q96LM1 132 aaPredicted RBP10.1□□□□□ -0.79
CXCL12-203ENST00000374429 HSPA12BQ96MM6 686 aa10.1□□□□□ -0.79
CXCL12-203ENST00000374429 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.1□□□□□ -0.79
CXCL12-203ENST00000374429 CCDC86Q9H6F5 360 aaKnown RBP10.1□□□□□ -0.79
CXCL12-203ENST00000374429 SPACA6W5XKT8 324 aa10.1□□□□□ -0.79
CXCL12-203ENST00000374429 A0A1B0GVT2 93 aa10.1□□□□□ -0.79
CXCL12-203ENST00000374429 ARHGAP33O14559 1287 aa10.1□□□□□ -0.79
CXCL12-203ENST00000374429 ALOX5P09917 674 aa10.1□□□□□ -0.79
CXCL12-203ENST00000374429 PRPH2P23942 346 aa10.1□□□□□ -0.79
CXCL12-203ENST00000374429 NAA10P41227 235 aaPredicted RBP10.1□□□□□ -0.79
CXCL12-203ENST00000374429 RPS27P42677 84 aaKnown RBP10.1□□□□□ -0.79
CXCL12-203ENST00000374429 TMBIM6P55061 237 aa10.1□□□□□ -0.79
CXCL12-203ENST00000374429 CTAG1AP78358 180 aa10.1□□□□□ -0.79
CXCL12-203ENST00000374429 ZIC1Q15915 447 aa10.1□□□□□ -0.79
CXCL12-203ENST00000374429 BHLHB9Q6PI77 547 aa10.1□□□□□ -0.79
CXCL12-203ENST00000374429 RCBTB1Q8NDN9 531 aa10.1□□□□□ -0.79
CXCL12-203ENST00000374429 RHOXF1Q8NHV9 184 aa10.1□□□□□ -0.79
CXCL12-203ENST00000374429 SUN3Q8TAQ9 357 aa10.1□□□□□ -0.79
CXCL12-203ENST00000374429 ZDHHC1Q8WTX9 485 aa10.1□□□□□ -0.79
CXCL12-203ENST00000374429 ELSPBP1Q96BH3 223 aa10.1□□□□□ -0.79
CXCL12-203ENST00000374429 EPYCQ99645 322 aa10.1□□□□□ -0.79
CXCL12-203ENST00000374429 ZFYVE21Q9BQ24 234 aa10.1□□□□□ -0.79
CXCL12-203ENST00000374429 FBXL4Q9UKA2 621 aa10.1□□□□□ -0.79
CXCL12-203ENST00000374429 PADI2Q9Y2J8 665 aa10.1□□□□□ -0.79
CXCL12-203ENST00000374429 ASB4Q9Y574 426 aa10.1□□□□□ -0.79
CXCL12-203ENST00000374429 IGHV3-20A0A0C4DH32 117 aa10.09□□□□□ -0.79
CXCL12-203ENST00000374429 LOC110117498-PIK3R3F6TDL0 507 aa10.09□□□□□ -0.79
CXCL12-203ENST00000374429 BLOC1S5-TXNDC5H3BN57 136 aa10.09□□□□□ -0.79
CXCL12-203ENST00000374429 EMC8O43402 210 aa10.09□□□□□ -0.79
CXCL12-203ENST00000374429 DOK2O60496 412 aa10.09□□□□□ -0.79
CXCL12-203ENST00000374429 CT62P0C5K7 136 aa10.09□□□□□ -0.79
CXCL12-203ENST00000374429 CSTF2P33240 577 aaKnown RBP eCLIP10.09□□□□□ -0.79
CXCL12-203ENST00000374429 ACVR1BP36896 505 aa10.09□□□□□ -0.79
CXCL12-203ENST00000374429 LTBRP36941 435 aa10.09□□□□□ -0.79
CXCL12-203ENST00000374429 SELENBP1Q13228 472 aa10.09□□□□□ -0.79
CXCL12-203ENST00000374429 FAM214AQ32MH5 1076 aa10.09□□□□□ -0.79
CXCL12-203ENST00000374429 DDI2Q5TDH0 399 aa10.09□□□□□ -0.79
CXCL12-203ENST00000374429 PGBD2Q6P3X8 592 aa10.09□□□□□ -0.79
CXCL12-203ENST00000374429 C16orf47Q6ZP98 133 aaPredicted RBP10.09□□□□□ -0.79
CXCL12-203ENST00000374429 DGAT2L6Q6ZPD8 337 aa10.09□□□□□ -0.79
CXCL12-203ENST00000374429 SYT9Q86SS6 491 aa10.09□□□□□ -0.79
CXCL12-203ENST00000374429 CPOQ8IVL8 374 aa10.09□□□□□ -0.79
CXCL12-203ENST00000374429 OR6K6Q8NGW6 343 aa10.09□□□□□ -0.79
CXCL12-203ENST00000374429 ATOH1Q92858 354 aaPredicted RBP10.09□□□□□ -0.79
CXCL12-203ENST00000374429 ORAI1Q96D31 301 aa10.09□□□□□ -0.79
CXCL12-203ENST00000374429 MAP6Q96JE9 813 aa10.09□□□□□ -0.79
CXCL12-203ENST00000374429 MOV10Q9HCE1 1003 aaKnown RBP10.09□□□□□ -0.79
CXCL12-203ENST00000374429 EVA1BQ9NVM1 165 aa10.09□□□□□ -0.79
CXCL12-203ENST00000374429 KCNN3Q9UGI6 736 aa10.09□□□□□ -0.79
CXCL12-203ENST00000374429 COL4A3Q01955 1670 aa10.09□□□□□ -0.79
CXCL12-203ENST00000374429 A0A1W2PQ72 361 aa10.09□□□□□ -0.79
CXCL12-203ENST00000374429 MEN1O00255 615 aa10.09□□□□□ -0.79
CXCL12-203ENST00000374429 SOCS6O14544 535 aa10.09□□□□□ -0.79
CXCL12-203ENST00000374429 PLD2O14939 933 aa10.09□□□□□ -0.79
CXCL12-203ENST00000374429 PROM1O43490 865 aa10.09□□□□□ -0.79
CXCL12-203ENST00000374429 PCMT1P22061 227 aa10.09□□□□□ -0.79
CXCL12-203ENST00000374429 PAICSP22234 425 aaKnown RBP10.09□□□□□ -0.79
CXCL12-203ENST00000374429 KCNJ5P48544 419 aa10.09□□□□□ -0.79
CXCL12-203ENST00000374429 GIPRP48546 466 aa10.09□□□□□ -0.79
CXCL12-203ENST00000374429 RUNX1T1Q06455 604 aa10.09□□□□□ -0.79
CXCL12-203ENST00000374429 SLC3A1Q07837 685 aa10.09□□□□□ -0.79
CXCL12-203ENST00000374429 RBBP4Q09028 425 aa10.09□□□□□ -0.79
CXCL12-203ENST00000374429 FLYWCH1Q4VC44 716 aa10.09□□□□□ -0.79
CXCL12-203ENST00000374429 PDZK1Q5T2W1 519 aa10.09□□□□□ -0.79
CXCL12-203ENST00000374429 SAXO2Q658L1 398 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms