RNA–Protein interactions for RNA: ENST00000373997.7

A1CF-204, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene A1CF, Length 2,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-204ENST00000373997 GFERP55789 205 aa12.38□□□□□ -0.43
A1CF-204ENST00000373997 BNC1Q01954 994 aa12.38□□□□□ -0.43
A1CF-204ENST00000373997 SCN1BQ07699 218 aa12.38□□□□□ -0.43
A1CF-204ENST00000373997 LARS2Q15031 903 aaKnown RBP12.38□□□□□ -0.43
A1CF-204ENST00000373997 RPS26P11Q5JNZ5 115 aaPredicted RBP12.38□□□□□ -0.43
A1CF-204ENST00000373997 C17orf82Q86X59 251 aaPredicted RBP12.38□□□□□ -0.43
A1CF-204ENST00000373997 PHC2Q8IXK0 858 aa12.38□□□□□ -0.43
A1CF-204ENST00000373997 TP53INP1Q96A56 240 aa12.38□□□□□ -0.43
A1CF-204ENST00000373997 SLC25A46Q96AG3 418 aa12.38□□□□□ -0.43
A1CF-204ENST00000373997 ZBED6CLQ96FA7 236 aaPredicted RBP12.38□□□□□ -0.43
A1CF-204ENST00000373997 POLDIP3Q9BY77 421 aaKnown RBP12.38□□□□□ -0.43
A1CF-204ENST00000373997 TPK1Q9H3S4 243 aa12.38□□□□□ -0.43
A1CF-204ENST00000373997 FSCN3Q9NQT6 498 aa12.38□□□□□ -0.43
A1CF-204ENST00000373997 SEMA3GQ9NS98 782 aa12.38□□□□□ -0.43
A1CF-204ENST00000373997 SNTG1Q9NSN8 517 aa12.38□□□□□ -0.43
A1CF-204ENST00000373997 LYARQ9NX58 379 aaKnown RBP12.38□□□□□ -0.43
A1CF-204ENST00000373997 IRGMA1A4Y4 181 aa12.38□□□□□ -0.43
A1CF-204ENST00000373997 SOX14O95416 240 aa12.38□□□□□ -0.43
A1CF-204ENST00000373997 HBQ1P09105 142 aa12.38□□□□□ -0.43
A1CF-204ENST00000373997 C8orf89P0DMQ9 161 aa12.38□□□□□ -0.43
A1CF-204ENST00000373997 ALPPL2P10696 532 aa12.38□□□□□ -0.43
A1CF-204ENST00000373997 IL7P13232 177 aa12.38□□□□□ -0.43
A1CF-204ENST00000373997 MYF5P13349 255 aa12.38□□□□□ -0.43
A1CF-204ENST00000373997 GNSP15586 552 aa12.38□□□□□ -0.43
A1CF-204ENST00000373997 NTSP30990 170 aa12.38□□□□□ -0.43
A1CF-204ENST00000373997 FRKP42685 505 aaPredicted RBP12.38□□□□□ -0.43
A1CF-204ENST00000373997 RFX2P48378 723 aa12.38□□□□□ -0.43
A1CF-204ENST00000373997 PCBP4P57723 403 aaKnown RBP12.38□□□□□ -0.43
A1CF-204ENST00000373997 ASAH1Q13510 395 aa12.38□□□□□ -0.43
A1CF-204ENST00000373997 ZNF79Q15937 498 aa12.38□□□□□ -0.43
A1CF-204ENST00000373997 ZNF750Q32MQ0 723 aa12.38□□□□□ -0.43
A1CF-204ENST00000373997 SPDYE7PQ495Y7 208 aa12.38□□□□□ -0.43
A1CF-204ENST00000373997 NKAIN2Q5VXU1 208 aa12.38□□□□□ -0.43
A1CF-204ENST00000373997 TNFAIP8L2Q6P589 184 aaPredicted RBP12.38□□□□□ -0.43
A1CF-204ENST00000373997 ABHD13Q7L211 337 aa12.38□□□□□ -0.43
A1CF-204ENST00000373997 PRSS41Q7RTY9 318 aa12.38□□□□□ -0.43
A1CF-204ENST00000373997 SZRD1Q7Z422 152 aa12.38□□□□□ -0.43
A1CF-204ENST00000373997 ZNF655Q8N720 491 aaPredicted RBP12.38□□□□□ -0.43
A1CF-204ENST00000373997 CSNK1A1LQ8N752 337 aa12.38□□□□□ -0.43
A1CF-204ENST00000373997 VANGL1Q8TAA9 524 aaPredicted RBP12.38□□□□□ -0.43
A1CF-204ENST00000373997 TGM7Q96PF1 710 aa12.38□□□□□ -0.43
A1CF-204ENST00000373997 BBS4Q96RK4 519 aa12.38□□□□□ -0.43
A1CF-204ENST00000373997 SLC22A4Q9H015 551 aa12.38□□□□□ -0.43
A1CF-204ENST00000373997 UCK1Q9HA47 277 aa12.38□□□□□ -0.43
A1CF-204ENST00000373997 SLC35C2Q9NQQ7 365 aa12.38□□□□□ -0.43
A1CF-204ENST00000373997 RNF215Q9Y6U7 377 aa12.38□□□□□ -0.43
A1CF-204ENST00000373997 MUC3AQ02505 3323 aa12.38□□□□□ -0.43
A1CF-204ENST00000373997 A0A1W2PRQ8 180 aa12.37□□□□□ -0.43
A1CF-204ENST00000373997 A0A1W2PS29 197 aa12.37□□□□□ -0.43
A1CF-204ENST00000373997 HMX3A6NHT5 357 aa12.37□□□□□ -0.43
A1CF-204ENST00000373997 SEC14L5O43304 696 aa12.37□□□□□ -0.43
A1CF-204ENST00000373997 SEMA7AO75326 666 aa12.37□□□□□ -0.43
A1CF-204ENST00000373997 RAB36O95755 333 aa12.37□□□□□ -0.43
A1CF-204ENST00000373997 CTSBP07858 339 aa12.37□□□□□ -0.43
A1CF-204ENST00000373997 NR2F6P10588 404 aa12.37□□□□□ -0.43
A1CF-204ENST00000373997 CPEP16870 476 aa12.37□□□□□ -0.43
A1CF-204ENST00000373997 GPC1P35052 558 aa12.37□□□□□ -0.43
A1CF-204ENST00000373997 FEN1P39748 380 aaKnown RBP12.37□□□□□ -0.43
A1CF-204ENST00000373997 NCBP2P52298 156 aaKnown RBP eCLIP12.37□□□□□ -0.432e-13■□□□□ 9.5
A1CF-204ENST00000373997 RPS26P62854 115 aaKnown RBP12.37□□□□□ -0.43
A1CF-204ENST00000373997 ZFP69Q49AA0 526 aa12.37□□□□□ -0.43
A1CF-204ENST00000373997 C6orf132Q5T0Z8 1188 aa12.37□□□□□ -0.43
A1CF-204ENST00000373997 NXNL2Q5VZ03 156 aa12.37□□□□□ -0.43
A1CF-204ENST00000373997 OGFOD3Q6PK18 319 aa12.37□□□□□ -0.43
A1CF-204ENST00000373997 XKRXQ6PP77 449 aa12.37□□□□□ -0.43
A1CF-204ENST00000373997 HSDL2Q6YN16 418 aa12.37□□□□□ -0.43
A1CF-204ENST00000373997 DEF8Q6ZN54 512 aa12.37□□□□□ -0.43
A1CF-204ENST00000373997 C6orf120Q7Z4R8 191 aa12.37□□□□□ -0.43
A1CF-204ENST00000373997 C1orf210Q8IVY1 113 aa12.37□□□□□ -0.43
A1CF-204ENST00000373997 LAX1Q8IWV1 398 aa12.37□□□□□ -0.43
A1CF-204ENST00000373997 MAML2Q8IZL2 1156 aaPredicted RBP12.37□□□□□ -0.43
A1CF-204ENST00000373997 SLC25A45Q8N413 288 aa12.37□□□□□ -0.43
A1CF-204ENST00000373997 TCEANCQ8N8B7 351 aa12.37□□□□□ -0.43
A1CF-204ENST00000373997 GDPD1Q8N9F7 314 aa12.37□□□□□ -0.43
A1CF-204ENST00000373997 Q8N9G6 341 aaPredicted RBP12.37□□□□□ -0.43
A1CF-204ENST00000373997 KIAA1143Q96AT1 154 aaPredicted RBP12.37□□□□□ -0.43
A1CF-204ENST00000373997 PHOX2BQ99453 314 aa12.37□□□□□ -0.43
A1CF-204ENST00000373997 MED18Q9BUE0 208 aa12.37□□□□□ -0.43
A1CF-204ENST00000373997 YIPF2Q9BWQ6 316 aa12.37□□□□□ -0.43
A1CF-204ENST00000373997 GLIPR2Q9H4G4 154 aa12.37□□□□□ -0.43
A1CF-204ENST00000373997 SIRT3Q9NTG7 399 aaPredicted RBP12.37□□□□□ -0.43
A1CF-204ENST00000373997 LRIT1Q9P2V4 623 aa12.37□□□□□ -0.43
A1CF-204ENST00000373997 ENTPD4Q9Y227 616 aa12.37□□□□□ -0.43
A1CF-204ENST00000373997 ADAMTS20P59510 1910 aa12.37□□□□□ -0.43
A1CF-204ENST00000373997 CENPXA8MT69 81 aa12.37□□□□□ -0.43
A1CF-204ENST00000373997 CENPBD1B2RD01 187 aa12.37□□□□□ -0.43
A1CF-204ENST00000373997 PROM1O43490 865 aa12.37□□□□□ -0.43
A1CF-204ENST00000373997 B3GALT2O43825 422 aa12.37□□□□□ -0.43
A1CF-204ENST00000373997 DNAJB6O75190 326 aa12.37□□□□□ -0.43
A1CF-204ENST00000373997 SMIM10L1P0DMW3 83 aa12.37□□□□□ -0.43
A1CF-204ENST00000373997 ZNF24P17028 368 aa12.37□□□□□ -0.43
A1CF-204ENST00000373997 CPN2P22792 545 aa12.37□□□□□ -0.43
A1CF-204ENST00000373997 DUSP2Q05923 314 aa12.37□□□□□ -0.43
A1CF-204ENST00000373997 TARDBPQ13148 414 aaKnown RBP eCLIP12.37□□□□□ -0.43
A1CF-204ENST00000373997 BAK1Q16611 211 aa12.37□□□□□ -0.43
A1CF-204ENST00000373997 PLK5Q496M5 336 aa12.37□□□□□ -0.43
A1CF-204ENST00000373997 GLYR1Q49A26 553 aaPredicted RBP12.37□□□□□ -0.43
A1CF-204ENST00000373997 C3orf38Q5JPI3 329 aa12.37□□□□□ -0.43
A1CF-204ENST00000373997 SLC35F3Q8IY50 421 aa12.37□□□□□ -0.43
A1CF-204ENST00000373997 PIGKQ92643 395 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms