RNA–Protein interactions for RNA: ENST00000373514.2

CDX4-201, Transcript of caudal type homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX4, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4-201ENST00000373514 ENTPD5O75356 428 aa16.98■□□□□ 0.31
CDX4-201ENST00000373514 RASAL1O95294 804 aa16.98■□□□□ 0.31
CDX4-201ENST00000373514 ZCCHC18P0CG32 403 aa16.98■□□□□ 0.31
CDX4-201ENST00000373514 NPIPA8P0DM63 369 aa16.98■□□□□ 0.31
CDX4-201ENST00000373514 OR12D1P0DN82 309 aa16.98■□□□□ 0.31
CDX4-201ENST00000373514 HSD17B1P14061 328 aa16.98■□□□□ 0.31
CDX4-201ENST00000373514 NAGAP17050 411 aa16.98■□□□□ 0.31
CDX4-201ENST00000373514 PTGDSP41222 190 aa16.98■□□□□ 0.31
CDX4-201ENST00000373514 GSK3BP49841 420 aa16.98■□□□□ 0.31
CDX4-201ENST00000373514 ACTR3P61158 418 aa16.98■□□□□ 0.31
CDX4-201ENST00000373514 MS4A2Q01362 244 aa16.98■□□□□ 0.31
CDX4-201ENST00000373514 OR2M7Q8NG81 312 aa16.98■□□□□ 0.31
CDX4-201ENST00000373514 MIPOL1Q8TD10 442 aa16.98■□□□□ 0.31
CDX4-201ENST00000373514 SNRNP40Q96DI7 357 aaKnown RBP16.98■□□□□ 0.31
CDX4-201ENST00000373514 SH3GL1Q99961 368 aa16.98■□□□□ 0.31
CDX4-201ENST00000373514 THUMPD3Q9BV44 507 aaKnown RBP16.98■□□□□ 0.31
CDX4-201ENST00000373514 BTBD2Q9BX70 525 aa16.98■□□□□ 0.31
CDX4-201ENST00000373514 ALG2Q9H553 416 aa16.98■□□□□ 0.31
CDX4-201ENST00000373514 TPT1P8Q9HAU6 139 aa16.98■□□□□ 0.31
CDX4-201ENST00000373514 TUBA8Q9NY65 449 aaPredicted RBP16.98■□□□□ 0.31
CDX4-201ENST00000373514 PCNX3Q9H6A9 2034 aa16.98■□□□□ 0.31
CDX4-201ENST00000373514 HMGN4O00479 90 aa16.97■□□□□ 0.31
CDX4-201ENST00000373514 CASP3P42574 277 aa16.97■□□□□ 0.31
CDX4-201ENST00000373514 PNLIPRP2P54317 469 aa16.97■□□□□ 0.31
CDX4-201ENST00000373514 PSPHP78330 225 aa16.97■□□□□ 0.31
CDX4-201ENST00000373514 TRIM25Q14258 630 aaKnown RBP16.97■□□□□ 0.31
CDX4-201ENST00000373514 INPP5JQ15735 1006 aaPredicted RBP16.97■□□□□ 0.31
CDX4-201ENST00000373514 GRAMD1BQ3KR37 738 aa16.97■□□□□ 0.31
CDX4-201ENST00000373514 RNFT1Q5M7Z0 435 aa16.97■□□□□ 0.31
CDX4-201ENST00000373514 FBXW10Q5XX13 1052 aa16.97■□□□□ 0.31
CDX4-201ENST00000373514 RPUSD3Q6P087 351 aaKnown RBP16.97■□□□□ 0.31
CDX4-201ENST00000373514 NUP54Q7Z3B4 507 aa16.97■□□□□ 0.31
CDX4-201ENST00000373514 IFNEQ86WN2 208 aa16.97■□□□□ 0.31
CDX4-201ENST00000373514 C10orf67Q8IYJ2 551 aa16.97■□□□□ 0.31
CDX4-201ENST00000373514 C10orf111Q8N326 155 aa16.97■□□□□ 0.31
CDX4-201ENST00000373514 FAM110BQ8TC76 370 aa16.97■□□□□ 0.31
CDX4-201ENST00000373514 GRHL3Q8TE85 626 aa16.97■□□□□ 0.31
CDX4-201ENST00000373514 ASB9Q96DX5 294 aa16.97■□□□□ 0.31
CDX4-201ENST00000373514 ECSITQ9BQ95 431 aa16.97■□□□□ 0.31
CDX4-201ENST00000373514 OSBPL11Q9BXB4 747 aa16.97■□□□□ 0.31
CDX4-201ENST00000373514 PCDHAC1Q9H158 963 aa16.97■□□□□ 0.31
CDX4-201ENST00000373514 TSPAN10Q9H1Z9 355 aaPredicted RBP16.97■□□□□ 0.31
CDX4-201ENST00000373514 METTL7AQ9H8H3 244 aa16.97■□□□□ 0.31
CDX4-201ENST00000373514 ASF1BQ9NVP2 202 aa16.97■□□□□ 0.31
CDX4-201ENST00000373514 GIN1Q9NXP7 522 aa16.97■□□□□ 0.31
CDX4-201ENST00000373514 KLRF1Q9NZS2 232 aa16.97■□□□□ 0.31
CDX4-201ENST00000373514 PRAMEF27A3QJZ7 478 aa16.96■□□□□ 0.31
CDX4-201ENST00000373514 C2orf72A6NCS6 295 aa16.96■□□□□ 0.31
CDX4-201ENST00000373514 PRAMEF25A6NGN4 478 aa16.96■□□□□ 0.31
CDX4-201ENST00000373514 DNAJA2O60884 412 aa16.96■□□□□ 0.31
CDX4-201ENST00000373514 WISP2O76076 250 aa16.96■□□□□ 0.31
CDX4-201ENST00000373514 ETFAP13804 333 aa16.96■□□□□ 0.31
CDX4-201ENST00000373514 CNR1P21554 472 aa16.96■□□□□ 0.31
CDX4-201ENST00000373514 RNF144AP50876 292 aaPredicted RBP16.96■□□□□ 0.31
CDX4-201ENST00000373514 INAQ16352 499 aa16.96■□□□□ 0.31
CDX4-201ENST00000373514 XAGE5Q8WWM1 108 aa16.96■□□□□ 0.31
CDX4-201ENST00000373514 KCTD14Q9BQ13 255 aaPredicted RBP16.96■□□□□ 0.31
CDX4-201ENST00000373514 RTN4RQ9BZR6 473 aa16.96■□□□□ 0.31
CDX4-201ENST00000373514 PIF1Q9H611 641 aa16.96■□□□□ 0.31
CDX4-201ENST00000373514 AP3M1Q9Y2T2 418 aa16.96■□□□□ 0.31
CDX4-201ENST00000373514 KLRC4-KLRK1H3BQV0 150 aa16.96■□□□□ 0.3
CDX4-201ENST00000373514 CLIC1O00299 241 aa16.96■□□□□ 0.3
CDX4-201ENST00000373514 ACOT8O14734 319 aa16.96■□□□□ 0.3
CDX4-201ENST00000373514 SCO2O43819 266 aa16.96■□□□□ 0.3
CDX4-201ENST00000373514 ABCB7O75027 752 aa16.96■□□□□ 0.3
CDX4-201ENST00000373514 UTS2O95399 124 aa16.96■□□□□ 0.3
CDX4-201ENST00000373514 ZIC2O95409 532 aaPredicted RBP16.96■□□□□ 0.3
CDX4-201ENST00000373514 EVI2BP34910 448 aa16.96■□□□□ 0.3
CDX4-201ENST00000373514 ERFP50548 548 aa16.96■□□□□ 0.3
CDX4-201ENST00000373514 RIPK1Q13546 671 aa16.96■□□□□ 0.3
CDX4-201ENST00000373514 CCNIQ14094 377 aa16.96■□□□□ 0.3
CDX4-201ENST00000373514 EFR3AQ14156 821 aa16.96■□□□□ 0.3
CDX4-201ENST00000373514 FLOT2Q14254 428 aa16.96■□□□□ 0.3
CDX4-201ENST00000373514 FAM180AQ6UWF9 173 aa16.96■□□□□ 0.3
CDX4-201ENST00000373514 OR10A6Q8NH74 314 aa16.96■□□□□ 0.3
CDX4-201ENST00000373514 CPT1CQ8TCG5 803 aa16.96■□□□□ 0.3
CDX4-201ENST00000373514 RNF138Q8WVD3 245 aa16.96■□□□□ 0.3
CDX4-201ENST00000373514 JSRP1Q96MG2 331 aaPredicted RBP16.96■□□□□ 0.3
CDX4-201ENST00000373514 FAM173AQ9BQD7 235 aa16.96■□□□□ 0.3
CDX4-201ENST00000373514 DOHHQ9BU89 302 aa16.96■□□□□ 0.3
CDX4-201ENST00000373514 TTTY12Q9BZ98 90 aa16.96■□□□□ 0.3
CDX4-201ENST00000373514 KAT8Q9H7Z6 458 aaKnown RBP16.96■□□□□ 0.3
CDX4-201ENST00000373514 RYDENQ9NUL5 291 aaKnown RBP16.96■□□□□ 0.3
CDX4-201ENST00000373514 CNIH4Q9P003 139 aa16.96■□□□□ 0.3
CDX4-201ENST00000373514 MRTO4Q9UKD2 239 aaKnown RBP16.96■□□□□ 0.3
CDX4-201ENST00000373514 USP22Q9UPT9 525 aa16.96■□□□□ 0.3
CDX4-201ENST00000373514 LRRC3CA6NJW4 275 aa16.95■□□□□ 0.3
CDX4-201ENST00000373514 FAM166BA8MTA8 275 aa16.95■□□□□ 0.3
CDX4-201ENST00000373514 EVPLLA8MZ36 301 aa16.95■□□□□ 0.3
CDX4-201ENST00000373514 ADAM10O14672 748 aa16.95■□□□□ 0.3
CDX4-201ENST00000373514 SLC28A2O43868 658 aa16.95■□□□□ 0.3
CDX4-201ENST00000373514 KRT75O95678 551 aa16.95■□□□□ 0.3
CDX4-201ENST00000373514 NUDT7P0C024 238 aa16.95■□□□□ 0.3
CDX4-201ENST00000373514 CRATP43155 626 aa16.95■□□□□ 0.3
CDX4-201ENST00000373514 TLE1Q04724 770 aa16.95■□□□□ 0.3
CDX4-201ENST00000373514 FOXO1Q12778 655 aa16.95■□□□□ 0.3
CDX4-201ENST00000373514 TRAP1Q12931 704 aaKnown RBP16.95■□□□□ 0.3
CDX4-201ENST00000373514 BNIP2Q12982 314 aa16.95■□□□□ 0.3
CDX4-201ENST00000373514 SYPL1Q16563 259 aa16.95■□□□□ 0.3
CDX4-201ENST00000373514 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms