RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 SEC22CQ9BRL7 303 aa14.5□□□□□ -0.09
COL5A1-201ENST00000371817 MEIS3P1A6NDR6 274 aa14.49□□□□□ -0.09
COL5A1-201ENST00000371817 CRYZQ08257 329 aaKnown RBP14.49□□□□□ -0.09
COL5A1-201ENST00000371817 MICAQ29983 383 aa14.49□□□□□ -0.09
COL5A1-201ENST00000371817 NAA40Q86UY6 237 aa14.49□□□□□ -0.09
COL5A1-201ENST00000371817 B4GALT5O43286 388 aa14.49□□□□□ -0.09
COL5A1-201ENST00000371817 SRPX2O60687 465 aaPredicted RBP14.49□□□□□ -0.09
COL5A1-201ENST00000371817 SULT1C4O75897 302 aa14.49□□□□□ -0.09
COL5A1-201ENST00000371817 RAB40ALP0C0E4 278 aa14.49□□□□□ -0.09
COL5A1-201ENST00000371817 POU6F2P78424 691 aaPredicted RBP14.49□□□□□ -0.09
COL5A1-201ENST00000371817 HSF1Q00613 529 aa14.49□□□□□ -0.09
COL5A1-201ENST00000371817 SLC14A1Q13336 389 aa14.49□□□□□ -0.09
COL5A1-201ENST00000371817 ZNF551Q7Z340 670 aaPredicted RBP14.49□□□□□ -0.09
COL5A1-201ENST00000371817 OR2T4Q8NH00 348 aa14.49□□□□□ -0.09
COL5A1-201ENST00000371817 RAB40AQ8WXH6 277 aa14.49□□□□□ -0.09
COL5A1-201ENST00000371817 C8orf33Q9H7E9 229 aaPredicted RBP14.49□□□□□ -0.09
COL5A1-201ENST00000371817 POPDC3Q9HBV1 291 aa14.49□□□□□ -0.09
COL5A1-201ENST00000371817 RAB9BQ9NP90 201 aa14.49□□□□□ -0.09
COL5A1-201ENST00000371817 CHRNA9Q9UGM1 479 aa14.49□□□□□ -0.09
COL5A1-201ENST00000371817 FBXL2Q9UKC9 423 aa14.49□□□□□ -0.09
COL5A1-201ENST00000371817 RASD1Q9Y272 281 aa14.49□□□□□ -0.09
COL5A1-201ENST00000371817 FZD7O75084 574 aa14.49□□□□□ -0.09
COL5A1-201ENST00000371817 LYPLA2O95372 231 aa14.49□□□□□ -0.09
COL5A1-201ENST00000371817 FHP07954 510 aa14.49□□□□□ -0.09
COL5A1-201ENST00000371817 ELK1P19419 428 aa14.49□□□□□ -0.09
COL5A1-201ENST00000371817 SPCS2Q15005 226 aa14.49□□□□□ -0.09
COL5A1-201ENST00000371817 NRSN1Q8IZ57 195 aa14.49□□□□□ -0.09
COL5A1-201ENST00000371817 RSPRY1Q96DX4 576 aa14.49□□□□□ -0.09
COL5A1-201ENST00000371817 PPP1R14DQ9NXH3 145 aa14.49□□□□□ -0.09
COL5A1-201ENST00000371817 SPHK1Q9NYA1 384 aa14.49□□□□□ -0.09
COL5A1-201ENST00000371817 COL1A2P08123 1366 aa14.49□□□□□ -0.09
COL5A1-201ENST00000371817 TMEM82A0PJX8 343 aa14.49□□□□□ -0.09
COL5A1-201ENST00000371817 A8MUA0 341 aa14.49□□□□□ -0.09
COL5A1-201ENST00000371817 CXADRP78310 365 aa14.49□□□□□ -0.09
COL5A1-201ENST00000371817 EMC10Q5UCC4 262 aa14.49□□□□□ -0.09
COL5A1-201ENST00000371817 C18orf63Q68DL7 685 aa14.49□□□□□ -0.09
COL5A1-201ENST00000371817 KLHDC1Q8N7A1 406 aa14.49□□□□□ -0.09
COL5A1-201ENST00000371817 C15orf54Q8N8G6 183 aa14.49□□□□□ -0.09
COL5A1-201ENST00000371817 KATNB1Q9BVA0 655 aa14.49□□□□□ -0.09
COL5A1-201ENST00000371817 ITGAMP11215 1152 aa14.49□□□□□ -0.09
COL5A1-201ENST00000371817 HCCSP53701 268 aa14.49□□□□□ -0.09
COL5A1-201ENST00000371817 GRB2P62993 217 aaKnown RBP14.49□□□□□ -0.09
COL5A1-201ENST00000371817 ATPAF1Q5TC12 328 aaPredicted RBP14.49□□□□□ -0.09
COL5A1-201ENST00000371817 ZNF691Q5VV52 312 aa14.49□□□□□ -0.09
COL5A1-201ENST00000371817 NPAS4Q8IUM7 802 aa14.49□□□□□ -0.09
COL5A1-201ENST00000371817 ZNF586Q9NXT0 402 aa14.49□□□□□ -0.09
COL5A1-201ENST00000371817 GLOD5A6NK44 160 aa14.49□□□□□ -0.09
COL5A1-201ENST00000371817 BCKDHBP21953 392 aa14.49□□□□□ -0.09
COL5A1-201ENST00000371817 OR1D2P34982 312 aa14.49□□□□□ -0.09
COL5A1-201ENST00000371817 ADCYAP1R1P41586 468 aa14.49□□□□□ -0.09
COL5A1-201ENST00000371817 SGCAQ16586 387 aa14.49□□□□□ -0.09
COL5A1-201ENST00000371817 LYPD4Q6UWN0 246 aa14.49□□□□□ -0.09
COL5A1-201ENST00000371817 FJX1Q86VR8 437 aa14.49□□□□□ -0.09
COL5A1-201ENST00000371817 PLD6Q8N2A8 252 aaKnown RBP14.49□□□□□ -0.09
COL5A1-201ENST00000371817 RHEBL1Q8TAI7 183 aa14.49□□□□□ -0.09
COL5A1-201ENST00000371817 SOCS4Q8WXH5 440 aa14.49□□□□□ -0.09
COL5A1-201ENST00000371817 THSD1Q9NS62 852 aa14.49□□□□□ -0.09
COL5A1-201ENST00000371817 TAC3Q9UHF0 121 aa14.49□□□□□ -0.09
COL5A1-201ENST00000371817 AGTR2P50052 363 aa14.48□□□□□ -0.09
COL5A1-201ENST00000371817 P2RX1P51575 399 aa14.48□□□□□ -0.09
COL5A1-201ENST00000371817 H3F3AP84243 136 aa14.48□□□□□ -0.09
COL5A1-201ENST00000371817 STEAP3Q658P3 488 aa14.48□□□□□ -0.09
COL5A1-201ENST00000371817 RTL6Q6ICC9 239 aa14.48□□□□□ -0.09
COL5A1-201ENST00000371817 OR5M8Q8NGP6 311 aa14.48□□□□□ -0.09
COL5A1-201ENST00000371817 KIF1AQ12756 1690 aa14.48□□□□□ -0.09
COL5A1-201ENST00000371817 F10P00742 488 aa14.48□□□□□ -0.09
COL5A1-201ENST00000371817 C8orf89P0DMQ9 161 aa14.48□□□□□ -0.09
COL5A1-201ENST00000371817 ZNF44P15621 663 aa14.48□□□□□ -0.09
COL5A1-201ENST00000371817 TAS2R46P59540 309 aa14.48□□□□□ -0.09
COL5A1-201ENST00000371817 OR52W1Q6IF63 320 aa14.48□□□□□ -0.09
COL5A1-201ENST00000371817 MRPL38Q96DV4 380 aaKnown RBP14.48□□□□□ -0.09
COL5A1-201ENST00000371817 DHRS9Q9BPW9 319 aa14.48□□□□□ -0.09
COL5A1-201ENST00000371817 CPNE7Q9UBL6 633 aa14.48□□□□□ -0.09
COL5A1-201ENST00000371817 SPATA31A3Q5VYP0 1347 aa14.48□□□□□ -0.09
COL5A1-201ENST00000371817 TTC24A2A3L6 582 aaPredicted RBP14.48□□□□□ -0.09
COL5A1-201ENST00000371817 NUDT19A8MXV4 375 aa14.48□□□□□ -0.09
COL5A1-201ENST00000371817 PMM2O15305 246 aa14.48□□□□□ -0.09
COL5A1-201ENST00000371817 HNF1BP35680 557 aa14.48□□□□□ -0.09
COL5A1-201ENST00000371817 ZDHHC14Q8IZN3 488 aa14.48□□□□□ -0.09
COL5A1-201ENST00000371817 TMEM130Q8N3G9 435 aa14.48□□□□□ -0.09
COL5A1-201ENST00000371817 SCARB1Q8WTV0 552 aa14.48□□□□□ -0.09
COL5A1-201ENST00000371817 OR5P2Q8WZ92 322 aa14.48□□□□□ -0.09
COL5A1-201ENST00000371817 ANKRD26Q9UPS8 1709 aa14.48□□□□□ -0.09
COL5A1-201ENST00000371817 SYT7O43581 403 aa14.48□□□□□ -0.09
COL5A1-201ENST00000371817 BLKP51451 505 aa14.48□□□□□ -0.09
COL5A1-201ENST00000371817 CLDN6P56747 220 aa14.48□□□□□ -0.09
COL5A1-201ENST00000371817 TAP2Q03519 686 aa14.48□□□□□ -0.09
COL5A1-201ENST00000371817 EMX1Q04741 257 aaPredicted RBP14.48□□□□□ -0.09
COL5A1-201ENST00000371817 SMYD5Q6GMV2 418 aa14.48□□□□□ -0.09
COL5A1-201ENST00000371817 OR4K14Q8NGD5 310 aa14.48□□□□□ -0.09
COL5A1-201ENST00000371817 ZNF599Q96NL3 588 aa14.48□□□□□ -0.09
COL5A1-201ENST00000371817 C2orf72A6NCS6 295 aa14.48□□□□□ -0.09
COL5A1-201ENST00000371817 SDHDO14521 159 aa14.48□□□□□ -0.09
COL5A1-201ENST00000371817 GABRB3P28472 473 aa14.48□□□□□ -0.09
COL5A1-201ENST00000371817 TSFMP43897 325 aaKnown RBP14.48□□□□□ -0.09
COL5A1-201ENST00000371817 SGK3Q96BR1 496 aa14.48□□□□□ -0.09
COL5A1-201ENST00000371817 ZDHHC11Q9H8X9 412 aa14.48□□□□□ -0.09
COL5A1-201ENST00000371817 AGPAT4Q9NRZ5 378 aa14.48□□□□□ -0.09
COL5A1-201ENST00000371817 CSTAP01040 98 aa14.48□□□□□ -0.09
COL5A1-201ENST00000371817 HOXB5P09067 269 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms