RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 DAG1Q14118 895 aa22.06■■□□□ 1.12
SNX3-203ENST00000368979 PCOLCEQ15113 449 aa22.06■■□□□ 1.12
SNX3-203ENST00000368979 ZNF141Q15928 474 aa22.06■■□□□ 1.12
SNX3-203ENST00000368979 WLSQ5T9L3 541 aa22.06■■□□□ 1.12
SNX3-203ENST00000368979 OR4C15Q8NGM1 316 aa22.06■■□□□ 1.12
SNX3-203ENST00000368979 USE1Q9NZ43 259 aa22.06■■□□□ 1.12
SNX3-203ENST00000368979 DLGAP1O14490 977 aa22.05■■□□□ 1.12
SNX3-203ENST00000368979 TNFSF15O95150 251 aa22.05■■□□□ 1.12
SNX3-203ENST00000368979 HPRP00739 348 aa22.05■■□□□ 1.12
SNX3-203ENST00000368979 ALPLP05186 524 aa22.05■■□□□ 1.12
SNX3-203ENST00000368979 LIMS1P48059 325 aa22.05■■□□□ 1.12
SNX3-203ENST00000368979 ALDH3A2P51648 485 aa22.05■■□□□ 1.12
SNX3-203ENST00000368979 PSMD4P55036 377 aaKnown RBP22.05■■□□□ 1.12
SNX3-203ENST00000368979 RNF4P78317 190 aa22.05■■□□□ 1.12
SNX3-203ENST00000368979 GK3PQ14409 553 aa22.05■■□□□ 1.12
SNX3-203ENST00000368979 CYP4Z1Q86W10 505 aa22.05■■□□□ 1.12
SNX3-203ENST00000368979 ESX1Q8N693 406 aa22.05■■□□□ 1.12
SNX3-203ENST00000368979 MAGEE2Q8TD90 523 aaPredicted RBP22.05■■□□□ 1.12
SNX3-203ENST00000368979 PHF10Q8WUB8 498 aaKnown RBP22.05■■□□□ 1.12
SNX3-203ENST00000368979 DHRS1Q96LJ7 313 aa22.05■■□□□ 1.12
SNX3-203ENST00000368979 BARD1Q99728 777 aaKnown RBP22.05■■□□□ 1.12
SNX3-203ENST00000368979 OSBPL10Q9BXB5 764 aa22.05■■□□□ 1.12
SNX3-203ENST00000368979 NRSN2Q9GZP1 204 aa22.05■■□□□ 1.12
SNX3-203ENST00000368979 RLIMQ9NVW2 624 aa22.05■■□□□ 1.12
SNX3-203ENST00000368979 A4GNTQ9UNA3 340 aa22.05■■□□□ 1.12
SNX3-203ENST00000368979 HS3ST3B1Q9Y662 390 aa22.05■■□□□ 1.12
SNX3-203ENST00000368979 TNFRSF11BO00300 401 aa22.04■■□□□ 1.12
SNX3-203ENST00000368979 TCN2P20062 427 aa22.04■■□□□ 1.12
SNX3-203ENST00000368979 NR0B1P51843 470 aaKnown RBP22.04■■□□□ 1.12
SNX3-203ENST00000368979 ARHGDIAP52565 204 aa22.04■■□□□ 1.12
SNX3-203ENST00000368979 HMGA2P52926 109 aa22.04■■□□□ 1.12
SNX3-203ENST00000368979 ATP12AP54707 1039 aa22.04■■□□□ 1.12
SNX3-203ENST00000368979 CDH12P55289 794 aa22.04■■□□□ 1.12
SNX3-203ENST00000368979 GANABQ14697 944 aaKnown RBP22.04■■□□□ 1.12
SNX3-203ENST00000368979 PDZK1Q5T2W1 519 aa22.04■■□□□ 1.12
SNX3-203ENST00000368979 MRPL2Q5T653 305 aaKnown RBP22.04■■□□□ 1.12
SNX3-203ENST00000368979 HSDL2Q6YN16 418 aa22.04■■□□□ 1.12
SNX3-203ENST00000368979 OR8K3Q8NH51 312 aa22.04■■□□□ 1.12
SNX3-203ENST00000368979 NUBPLQ8TB37 319 aa22.04■■□□□ 1.12
SNX3-203ENST00000368979 HSPBAP1Q96EW2 488 aa22.04■■□□□ 1.12
SNX3-203ENST00000368979 ACER3Q9NUN7 267 aa22.04■■□□□ 1.12
SNX3-203ENST00000368979 MRTO4Q9UKD2 239 aaKnown RBP22.04■■□□□ 1.12
SNX3-203ENST00000368979 RAB26Q9ULW5 256 aa22.04■■□□□ 1.12
SNX3-203ENST00000368979 IGHV1-45A0A0A0MS14 117 aa22.03■■□□□ 1.12
SNX3-203ENST00000368979 A0A1W2PQ72 361 aa22.03■■□□□ 1.12
SNX3-203ENST00000368979 CDHR4A6H8M9 788 aa22.03■■□□□ 1.12
SNX3-203ENST00000368979 FRS3O43559 492 aa22.03■■□□□ 1.12
SNX3-203ENST00000368979 IGHEP01854 428 aa22.03■■□□□ 1.12
SNX3-203ENST00000368979 UQCRBP14927 111 aa22.03■■□□□ 1.12
SNX3-203ENST00000368979 FUT4P22083 530 aa22.03■■□□□ 1.12
SNX3-203ENST00000368979 PSPHP78330 225 aa22.03■■□□□ 1.12
SNX3-203ENST00000368979 PLAURQ03405 335 aa22.03■■□□□ 1.12
SNX3-203ENST00000368979 LAPTM4AQ15012 233 aa22.03■■□□□ 1.12
SNX3-203ENST00000368979 OIT3Q8WWZ8 545 aa22.03■■□□□ 1.12
SNX3-203ENST00000368979 TP53INP1Q96A56 240 aa22.03■■□□□ 1.12
SNX3-203ENST00000368979 EFHD2Q96C19 240 aaPredicted RBP22.03■■□□□ 1.12
SNX3-203ENST00000368979 PRRC1Q96M27 445 aa22.03■■□□□ 1.12
SNX3-203ENST00000368979 RBM4BQ9BQ04 359 aaKnown RBP22.03■■□□□ 1.12
SNX3-203ENST00000368979 RBM4Q9BWF3 364 aaKnown RBP22.03■■□□□ 1.12
SNX3-203ENST00000368979 ZNF700Q9H0M5 742 aa22.03■■□□□ 1.12
SNX3-203ENST00000368979 TCFL5Q9UL49 500 aa22.03■■□□□ 1.12
SNX3-203ENST00000368979 SDK2Q58EX2 2172 aa22.03■■□□□ 1.12
SNX3-203ENST00000368979 TPST2O60704 377 aa22.02■■□□□ 1.12
SNX3-203ENST00000368979 GADD45GO95257 159 aa22.02■■□□□ 1.12
SNX3-203ENST00000368979 COX6A1P12074 109 aa22.02■■□□□ 1.12
SNX3-203ENST00000368979 PRKACGP22612 351 aa22.02■■□□□ 1.12
SNX3-203ENST00000368979 MMP11P24347 488 aa22.02■■□□□ 1.12
SNX3-203ENST00000368979 RGS8P57771 180 aaPredicted RBP22.02■■□□□ 1.12
SNX3-203ENST00000368979 FGFBP1Q14512 234 aa22.02■■□□□ 1.12
SNX3-203ENST00000368979 TSPYL5Q86VY4 417 aaPredicted RBP22.02■■□□□ 1.12
SNX3-203ENST00000368979 PIK3C3Q8NEB9 887 aa22.02■■□□□ 1.12
SNX3-203ENST00000368979 DIO2Q92813 273 aa22.02■■□□□ 1.12
SNX3-203ENST00000368979 NAF1Q96HR8 494 aaKnown RBP22.02■■□□□ 1.12
SNX3-203ENST00000368979 SMURF2Q9HAU4 748 aa22.02■■□□□ 1.12
SNX3-203ENST00000368979 PDP1Q9P0J1 537 aaPredicted RBP22.02■■□□□ 1.12
SNX3-203ENST00000368979 RHCGQ9UBD6 479 aa22.02■■□□□ 1.12
SNX3-203ENST00000368979 EP300Q09472 2414 aaPredicted RBP22.02■■□□□ 1.12
SNX3-203ENST00000368979 TRBV11-1A0A0K0K1C0 115 aa22.01■■□□□ 1.11
SNX3-203ENST00000368979 CDC14CA4D256 554 aa22.01■■□□□ 1.11
SNX3-203ENST00000368979 LCN1P31025 176 aa22.01■■□□□ 1.11
SNX3-203ENST00000368979 NOVA1P51513 510 aaKnown RBP22.01■■□□□ 1.11
SNX3-203ENST00000368979 EXOC3L2Q2M3D2 409 aa22.01■■□□□ 1.11
SNX3-203ENST00000368979 NHSL2Q5HYW2 709 aa22.01■■□□□ 1.11
SNX3-203ENST00000368979 COLEC12Q5KU26 742 aa22.01■■□□□ 1.11
SNX3-203ENST00000368979 ANKRD34AQ69YU3 496 aa22.01■■□□□ 1.11
SNX3-203ENST00000368979 NLGN4XQ8N0W4 816 aa22.01■■□□□ 1.11
SNX3-203ENST00000368979 SLC34A3Q8N130 599 aa22.01■■□□□ 1.11
SNX3-203ENST00000368979 NLGN4YQ8NFZ3 816 aaPredicted RBP22.01■■□□□ 1.11
SNX3-203ENST00000368979 OR4C3Q8NH37 302 aa22.01■■□□□ 1.11
SNX3-203ENST00000368979 ZNF570Q96NI8 536 aa22.01■■□□□ 1.11
SNX3-203ENST00000368979 OSBPL11Q9BXB4 747 aa22.01■■□□□ 1.11
SNX3-203ENST00000368979 HOXD1Q9GZZ0 328 aa22.01■■□□□ 1.11
SNX3-203ENST00000368979 ARMC7Q9H6L4 198 aa22.01■■□□□ 1.11
SNX3-203ENST00000368979 EVA1AQ9H8M9 152 aa22.01■■□□□ 1.11
SNX3-203ENST00000368979 NMNAT1Q9HAN9 279 aaPredicted RBP22.01■■□□□ 1.11
SNX3-203ENST00000368979 ST6GALNAC1Q9NSC7 600 aaPredicted RBP22.01■■□□□ 1.11
SNX3-203ENST00000368979 SMPD3Q9NY59 655 aaPredicted RBP22.01■■□□□ 1.11
SNX3-203ENST00000368979 FARSAQ9Y285 508 aaKnown RBP22.01■■□□□ 1.11
SNX3-203ENST00000368979 LRCH1Q9Y2L9 728 aa22.01■■□□□ 1.11
SNX3-203ENST00000368979 AP4B1Q9Y6B7 739 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms