RNA–Protein interactions for RNA: ENST00000368445.9

SHC1-202, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-202ENST00000368445 YIPF6Q96EC8 236 aa12.87□□□□□ -0.35
SHC1-202ENST00000368445 PTCHD1Q96NR3 888 aa12.87□□□□□ -0.35
SHC1-202ENST00000368445 GAL3ST4Q96RP7 486 aa12.87□□□□□ -0.35
SHC1-202ENST00000368445 TMEM27Q9HBJ8 222 aa12.87□□□□□ -0.35
SHC1-202ENST00000368445 TRPV5Q9NQA5 729 aa12.87□□□□□ -0.35
SHC1-202ENST00000368445 POLE4Q9NR33 117 aa12.87□□□□□ -0.35
SHC1-202ENST00000368445 PILRAQ9UKJ1 303 aa12.87□□□□□ -0.35
SHC1-202ENST00000368445 DCNP07585 359 aaKnown RBP12.87□□□□□ -0.35
SHC1-202ENST00000368445 PSMA1P25786 263 aaKnown RBP12.87□□□□□ -0.35
SHC1-202ENST00000368445 DAB2P98082 770 aa12.87□□□□□ -0.35
SHC1-202ENST00000368445 BNC1Q01954 994 aa12.87□□□□□ -0.35
SHC1-202ENST00000368445 ZNF846Q147U1 533 aa12.87□□□□□ -0.35
SHC1-202ENST00000368445 PDZK1Q5T2W1 519 aa12.87□□□□□ -0.35
SHC1-202ENST00000368445 OR2G6Q5TZ20 316 aa12.87□□□□□ -0.35
SHC1-202ENST00000368445 SLX4IPQ5VYV7 408 aa12.87□□□□□ -0.35
SHC1-202ENST00000368445 TP53INP1Q96A56 240 aa12.87□□□□□ -0.35
SHC1-202ENST00000368445 TM4SF19Q96DZ7 209 aa12.87□□□□□ -0.35
SHC1-202ENST00000368445 PIGUQ9H490 435 aa12.87□□□□□ -0.35
SHC1-202ENST00000368445 ATP13A2Q9NQ11 1180 aa12.87□□□□□ -0.35
SHC1-202ENST00000368445 SNTG1Q9NSN8 517 aa12.87□□□□□ -0.35
SHC1-202ENST00000368445 MAN2C1Q9NTJ4 1040 aa12.87□□□□□ -0.35
SHC1-202ENST00000368445 PTGFRNQ9P2B2 879 aa12.87□□□□□ -0.35
SHC1-202ENST00000368445 C19orf53Q9UNZ5 99 aaPredicted RBP12.87□□□□□ -0.35
SHC1-202ENST00000368445 KNTC1P50748 2209 aa12.87□□□□□ -0.35
SHC1-202ENST00000368445 MUC22E2RYF6 1773 aaPredicted RBP12.87□□□□□ -0.35
SHC1-202ENST00000368445 SH3D21A4FU49 640 aa12.86□□□□□ -0.35
SHC1-202ENST00000368445 HRKO00198 91 aa12.86□□□□□ -0.35
SHC1-202ENST00000368445 KIAA0513O60268 411 aa12.86□□□□□ -0.35
SHC1-202ENST00000368445 PAICSP22234 425 aaKnown RBP12.86□□□□□ -0.35
SHC1-202ENST00000368445 SOX6P35712 828 aa12.86□□□□□ -0.35
SHC1-202ENST00000368445 GCGRP47871 477 aa12.86□□□□□ -0.35
SHC1-202ENST00000368445 EMP3P54852 163 aa12.86□□□□□ -0.35
SHC1-202ENST00000368445 SMAD4Q13485 552 aaKnown RBP12.86□□□□□ -0.35
SHC1-202ENST00000368445 FAAH2Q6GMR7 532 aa12.86□□□□□ -0.35
SHC1-202ENST00000368445 POMZP3Q6PJE2 187 aa12.86□□□□□ -0.35
SHC1-202ENST00000368445 IGFN1Q86VF2 1251 aa12.86□□□□□ -0.35
SHC1-202ENST00000368445 OR52L1Q8NGH7 329 aa12.86□□□□□ -0.35
SHC1-202ENST00000368445 IFT27Q9BW83 186 aa12.86□□□□□ -0.35
SHC1-202ENST00000368445 PRRG3Q9BZD7 231 aa12.86□□□□□ -0.35
SHC1-202ENST00000368445 OR8D2Q9GZM6 311 aa12.86□□□□□ -0.35
SHC1-202ENST00000368445 ERVK-19Q9WJR5 959 aa12.86□□□□□ -0.35
SHC1-202ENST00000368445 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.86□□□□□ -0.35
SHC1-202ENST00000368445 CCRL2O00421 344 aa12.86□□□□□ -0.35
SHC1-202ENST00000368445 TNFSF14O43557 240 aa12.86□□□□□ -0.35
SHC1-202ENST00000368445 ZIC2O95409 532 aaPredicted RBP12.86□□□□□ -0.35
SHC1-202ENST00000368445 SLC9A3P48764 834 aa12.86□□□□□ -0.35
SHC1-202ENST00000368445 CDH11P55287 796 aa12.86□□□□□ -0.35
SHC1-202ENST00000368445 COL13A1Q5TAT6 717 aaPredicted RBP12.86□□□□□ -0.35
SHC1-202ENST00000368445 KBTBD8Q8NFY9 601 aa12.86□□□□□ -0.35
SHC1-202ENST00000368445 ACOT11Q8WXI4 607 aaPredicted RBP12.86□□□□□ -0.35
SHC1-202ENST00000368445 RNFT2Q96EX2 444 aa12.86□□□□□ -0.35
SHC1-202ENST00000368445 GIMAP5Q96F15 307 aa12.86□□□□□ -0.35
SHC1-202ENST00000368445 ZNF764Q96H86 408 aaPredicted RBP12.86□□□□□ -0.35
SHC1-202ENST00000368445 CRELD1Q96HD1 420 aa12.86□□□□□ -0.35
SHC1-202ENST00000368445 SPACA7Q96KW9 195 aa12.86□□□□□ -0.35
SHC1-202ENST00000368445 PDE7BQ9NP56 450 aa12.86□□□□□ -0.35
SHC1-202ENST00000368445 KRCC1Q9NPI7 259 aaPredicted RBP12.86□□□□□ -0.35
SHC1-202ENST00000368445 PLCXD1Q9NUJ7 323 aa12.86□□□□□ -0.35
SHC1-202ENST00000368445 DHCR7Q9UBM7 475 aaKnown RBP12.86□□□□□ -0.35
SHC1-202ENST00000368445 HYKKA2RU49 373 aa12.86□□□□□ -0.35
SHC1-202ENST00000368445 GRK5P34947 590 aa12.86□□□□□ -0.35
SHC1-202ENST00000368445 IDUAP35475 653 aa12.86□□□□□ -0.35
SHC1-202ENST00000368445 MAN2A2P49641 1150 aa12.86□□□□□ -0.35
SHC1-202ENST00000368445 ZNF404Q494X3 552 aa12.86□□□□□ -0.35
SHC1-202ENST00000368445 EIPR1Q53HC9 387 aa12.86□□□□□ -0.35
SHC1-202ENST00000368445 DGAT2L6Q6ZPD8 337 aa12.86□□□□□ -0.35
SHC1-202ENST00000368445 GJD3Q8N144 294 aa12.86□□□□□ -0.35
SHC1-202ENST00000368445 ZNF619Q8N2I2 560 aa12.86□□□□□ -0.35
SHC1-202ENST00000368445 OR2L13Q8N349 312 aa12.86□□□□□ -0.35
SHC1-202ENST00000368445 FNDC8Q8TC99 324 aa12.86□□□□□ -0.35
SHC1-202ENST00000368445 UCKL1Q9NWZ5 548 aa12.86□□□□□ -0.35
SHC1-202ENST00000368445 LRIT1Q9P2V4 623 aa12.86□□□□□ -0.35
SHC1-202ENST00000368445 ARHGAP33O14559 1287 aa12.85□□□□□ -0.35
SHC1-202ENST00000368445 AQP9O43315 295 aa12.85□□□□□ -0.35
SHC1-202ENST00000368445 SLC2A10O95528 541 aa12.85□□□□□ -0.35
SHC1-202ENST00000368445 WNT1P04628 370 aa12.85□□□□□ -0.35
SHC1-202ENST00000368445 DNASE1L3Q13609 305 aa12.85□□□□□ -0.35
SHC1-202ENST00000368445 NCF4Q15080 339 aa12.85□□□□□ -0.35
SHC1-202ENST00000368445 TIMM50Q3ZCQ8 353 aa12.85□□□□□ -0.35
SHC1-202ENST00000368445 C1orf189Q5VU69 101 aa12.85□□□□□ -0.35
SHC1-202ENST00000368445 UBE2UQ5VVX9 321 aa12.85□□□□□ -0.35
SHC1-202ENST00000368445 ZAR1Q86SH2 424 aa12.85□□□□□ -0.35
SHC1-202ENST00000368445 LINC00471Q8N535 108 aa12.85□□□□□ -0.35
SHC1-202ENST00000368445 C9orf43Q8TAL5 461 aaPredicted RBP12.85□□□□□ -0.35
SHC1-202ENST00000368445 LYRM4Q9HD34 91 aa12.85□□□□□ -0.35
SHC1-202ENST00000368445 POMT2Q9UKY4 750 aa12.85□□□□□ -0.35
SHC1-202ENST00000368445 VPS13AQ96RL7 3174 aa12.85□□□□□ -0.35
SHC1-202ENST00000368445 TBX1O43435 398 aa12.85□□□□□ -0.35
SHC1-202ENST00000368445 DBIP07108 87 aaKnown RBP12.85□□□□□ -0.35
SHC1-202ENST00000368445 IL9P15248 144 aa12.85□□□□□ -0.35
SHC1-202ENST00000368445 CD27P26842 260 aa12.85□□□□□ -0.35
SHC1-202ENST00000368445 HNRNPKP61978 463 aaKnown RBP eCLIP12.85□□□□□ -0.358e-9■■□□□ 12.1
SHC1-202ENST00000368445 RUNX1T1Q06455 604 aa12.85□□□□□ -0.35
SHC1-202ENST00000368445 OR1Q1Q15612 314 aa12.85□□□□□ -0.35
SHC1-202ENST00000368445 SHISA6Q6ZSJ9 500 aa12.85□□□□□ -0.35
SHC1-202ENST00000368445 USP43Q70EL4 1123 aa12.85□□□□□ -0.35
SHC1-202ENST00000368445 GPR135Q8IZ08 494 aa12.85□□□□□ -0.35
SHC1-202ENST00000368445 ANKK1Q8NFD2 765 aa12.85□□□□□ -0.35
SHC1-202ENST00000368445 CNOT9Q92600 299 aaKnown RBP12.85□□□□□ -0.35
SHC1-202ENST00000368445 SPRTNQ9H040 489 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms