RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 ANGPTL1O95841 491 aa14.4□□□□□ -0.1
CKS1B-202ENST00000368436 IGKV1D-16P01601 117 aa14.4□□□□□ -0.1
CKS1B-202ENST00000368436 UROSP10746 265 aa14.4□□□□□ -0.1
CKS1B-202ENST00000368436 GABRA3P34903 492 aa14.4□□□□□ -0.1
CKS1B-202ENST00000368436 RPS3AP61247 264 aaKnown RBP14.4□□□□□ -0.1
CKS1B-202ENST00000368436 SIRPAP78324 504 aa14.4□□□□□ -0.1
CKS1B-202ENST00000368436 PON3Q15166 354 aa14.4□□□□□ -0.1
CKS1B-202ENST00000368436 ACKR1Q16570 336 aa14.4□□□□□ -0.1
CKS1B-202ENST00000368436 ZNF551Q7Z340 670 aaPredicted RBP14.4□□□□□ -0.1
CKS1B-202ENST00000368436 GGNQ86UU5 652 aa14.4□□□□□ -0.1
CKS1B-202ENST00000368436 ZNF764Q96H86 408 aaPredicted RBP14.4□□□□□ -0.1
CKS1B-202ENST00000368436 MED18Q9BUE0 208 aa14.4□□□□□ -0.1
CKS1B-202ENST00000368436 TBL1XR1Q9BZK7 514 aa14.4□□□□□ -0.1
CKS1B-202ENST00000368436 DSCAMO60469 2012 aa14.4□□□□□ -0.1
CKS1B-202ENST00000368436 PLIN3O60664 434 aa14.39□□□□□ -0.11
CKS1B-202ENST00000368436 TBX19O60806 448 aa14.39□□□□□ -0.11
CKS1B-202ENST00000368436 SEC22BO75396 215 aa14.39□□□□□ -0.11
CKS1B-202ENST00000368436 CRCPO75575 148 aa14.39□□□□□ -0.11
CKS1B-202ENST00000368436 NKX2-2O95096 273 aa14.39□□□□□ -0.11
CKS1B-202ENST00000368436 KCNH1O95259 989 aa14.39□□□□□ -0.11
CKS1B-202ENST00000368436 PRPS2P11908 318 aa14.39□□□□□ -0.11
CKS1B-202ENST00000368436 FPR1P21462 350 aa14.39□□□□□ -0.11
CKS1B-202ENST00000368436 LOXP28300 417 aaPredicted RBP14.39□□□□□ -0.11
CKS1B-202ENST00000368436 ADSLP30566 484 aaPredicted RBP14.39□□□□□ -0.11
CKS1B-202ENST00000368436 RFX3P48380 749 aa14.39□□□□□ -0.11
CKS1B-202ENST00000368436 GRAMD1BQ3KR37 738 aa14.39□□□□□ -0.11
CKS1B-202ENST00000368436 CCDC153Q494R4 210 aa14.39□□□□□ -0.11
CKS1B-202ENST00000368436 C22orf34Q6ZV56 151 aa14.39□□□□□ -0.11
CKS1B-202ENST00000368436 FAM214BQ7L5A3 538 aa14.39□□□□□ -0.11
CKS1B-202ENST00000368436 PIK3R3Q92569 461 aa14.39□□□□□ -0.11
CKS1B-202ENST00000368436 GFM2Q969S9 779 aaKnown RBP14.39□□□□□ -0.11
CKS1B-202ENST00000368436 PIK3IP1Q96FE7 263 aa14.39□□□□□ -0.11
CKS1B-202ENST00000368436 FCRL1Q96LA6 429 aa14.39□□□□□ -0.11
CKS1B-202ENST00000368436 OXSMQ9NWU1 459 aa14.39□□□□□ -0.11
CKS1B-202ENST00000368436 NTMQ9P121 344 aa14.39□□□□□ -0.11
CKS1B-202ENST00000368436 PROCRQ9UNN8 238 aa14.39□□□□□ -0.11
CKS1B-202ENST00000368436 ARID1AO14497 2285 aa14.38□□□□□ -0.11
CKS1B-202ENST00000368436 SHISA8B8ZZ34 492 aa14.38□□□□□ -0.11
CKS1B-202ENST00000368436 ALG1L2C9J202 215 aa14.38□□□□□ -0.11
CKS1B-202ENST00000368436 SLC28A1O00337 649 aa14.38□□□□□ -0.11
CKS1B-202ENST00000368436 SMPD2O60906 423 aa14.38□□□□□ -0.11
CKS1B-202ENST00000368436 AQP8O94778 261 aa14.38□□□□□ -0.11
CKS1B-202ENST00000368436 NGFRP08138 427 aa14.38□□□□□ -0.11
CKS1B-202ENST00000368436 FCGR2AP12318 317 aa14.38□□□□□ -0.11
CKS1B-202ENST00000368436 IL11P20809 199 aa14.38□□□□□ -0.11
CKS1B-202ENST00000368436 CRHR1P34998 444 aa14.38□□□□□ -0.11
CKS1B-202ENST00000368436 FRKP42685 505 aaPredicted RBP14.38□□□□□ -0.11
CKS1B-202ENST00000368436 CCT5P48643 541 aa14.38□□□□□ -0.11
CKS1B-202ENST00000368436 HSPB3Q12988 150 aa14.38□□□□□ -0.11
CKS1B-202ENST00000368436 SGCBQ16585 318 aa14.38□□□□□ -0.11
CKS1B-202ENST00000368436 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.38□□□□□ -0.11
CKS1B-202ENST00000368436 CFAP157Q5JU67 520 aa14.38□□□□□ -0.11
CKS1B-202ENST00000368436 Q5PR19 223 aa14.38□□□□□ -0.11
CKS1B-202ENST00000368436 PRSS57Q6UWY2 283 aa14.38□□□□□ -0.11
CKS1B-202ENST00000368436 Q71RC1 249 aaPredicted RBP14.38□□□□□ -0.11
CKS1B-202ENST00000368436 ZNF550Q7Z398 422 aa14.38□□□□□ -0.11
CKS1B-202ENST00000368436 EXOC3L1Q86VI1 746 aa14.38□□□□□ -0.11
CKS1B-202ENST00000368436 P3H2Q8IVL5 708 aa14.38□□□□□ -0.11
CKS1B-202ENST00000368436 CEP112Q8N8E3 955 aa14.38□□□□□ -0.11
CKS1B-202ENST00000368436 CEP70Q8NHQ1 597 aa14.38□□□□□ -0.11
CKS1B-202ENST00000368436 FAM110BQ8TC76 370 aa14.38□□□□□ -0.11
CKS1B-202ENST00000368436 CAVIN3Q969G5 261 aa14.38□□□□□ -0.11
CKS1B-202ENST00000368436 ARSGQ96EG1 525 aa14.38□□□□□ -0.11
CKS1B-202ENST00000368436 HS3ST6Q96QI5 342 aa14.38□□□□□ -0.11
CKS1B-202ENST00000368436 HHATLQ9HCP6 504 aa14.38□□□□□ -0.11
CKS1B-202ENST00000368436 EQTNQ9NQ60 294 aa14.38□□□□□ -0.11
CKS1B-202ENST00000368436 PLSCR4Q9NRQ2 329 aa14.38□□□□□ -0.11
CKS1B-202ENST00000368436 C1orf109Q9NX04 203 aa14.38□□□□□ -0.11
CKS1B-202ENST00000368436 STOML1Q9UBI4 398 aa14.38□□□□□ -0.11
CKS1B-202ENST00000368436 NSD1Q96L73 2696 aaPredicted RBP14.38□□□□□ -0.11
CKS1B-202ENST00000368436 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.37□□□□□ -0.11
CKS1B-202ENST00000368436 A0A087WZY1 265 aa14.37□□□□□ -0.11
CKS1B-202ENST00000368436 PDPK1O15530 556 aa14.37□□□□□ -0.11
CKS1B-202ENST00000368436 HEXAP06865 529 aa14.37□□□□□ -0.11
CKS1B-202ENST00000368436 CPA3P15088 417 aa14.37□□□□□ -0.11
CKS1B-202ENST00000368436 ZNF17P17021 662 aa14.37□□□□□ -0.11
CKS1B-202ENST00000368436 TBXA2RP21731 343 aa14.37□□□□□ -0.11
CKS1B-202ENST00000368436 PSMA4P25789 261 aaKnown RBP14.37□□□□□ -0.11
CKS1B-202ENST00000368436 SLC6A8P48029 635 aa14.37□□□□□ -0.11
CKS1B-202ENST00000368436 KCNJ5P48544 419 aa14.37□□□□□ -0.11
CKS1B-202ENST00000368436 VPS26BQ4G0F5 336 aa14.37□□□□□ -0.11
CKS1B-202ENST00000368436 CLEC6AQ6EIG7 209 aa14.37□□□□□ -0.11
CKS1B-202ENST00000368436 ANKRD26P1Q6NSI1 321 aa14.37□□□□□ -0.11
CKS1B-202ENST00000368436 CLEC9AQ6UXN8 241 aa14.37□□□□□ -0.11
CKS1B-202ENST00000368436 C20orf204Q6ZNR8 217 aa14.37□□□□□ -0.11
CKS1B-202ENST00000368436 RNF165Q6ZSG1 346 aa14.37□□□□□ -0.11
CKS1B-202ENST00000368436 Q6ZSR9 355 aa14.37□□□□□ -0.11
CKS1B-202ENST00000368436 CDRT4Q8N9R6 151 aa14.37□□□□□ -0.11
CKS1B-202ENST00000368436 OR4C3Q8NH37 302 aa14.37□□□□□ -0.11
CKS1B-202ENST00000368436 GPR151Q8TDV0 419 aa14.37□□□□□ -0.11
CKS1B-202ENST00000368436 CIDECQ96AQ7 238 aaPredicted RBP14.37□□□□□ -0.11
CKS1B-202ENST00000368436 GIMAP5Q96F15 307 aa14.37□□□□□ -0.11
CKS1B-202ENST00000368436 ADGRG7Q96K78 797 aa14.37□□□□□ -0.11
CKS1B-202ENST00000368436 REEP4Q9H6H4 257 aa14.37□□□□□ -0.11
CKS1B-202ENST00000368436 UBTD1Q9HAC8 227 aa14.37□□□□□ -0.11
CKS1B-202ENST00000368436 LRTM1Q9HBL6 345 aa14.37□□□□□ -0.11
CKS1B-202ENST00000368436 VDAC3Q9Y277 283 aa14.37□□□□□ -0.11
CKS1B-202ENST00000368436 PTGDR2Q9Y5Y4 395 aa14.37□□□□□ -0.11
CKS1B-202ENST00000368436 C7orf72A4D263 438 aa14.36□□□□□ -0.11
CKS1B-202ENST00000368436 FAM171A2A8MVW0 826 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms