RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 TANKQ92844 425 aa11.13□□□□□ -0.63
CDC42BPA-202ENST00000366764 SLC25A46Q96AG3 418 aa11.13□□□□□ -0.63
CDC42BPA-202ENST00000366764 TBC1D20Q96BZ9 403 aa11.13□□□□□ -0.63
CDC42BPA-202ENST00000366764 ANTXRLA6NF34 631 aa11.13□□□□□ -0.63
CDC42BPA-202ENST00000366764 RNF144AP50876 292 aaPredicted RBP11.13□□□□□ -0.63
CDC42BPA-202ENST00000366764 SMN1Q16637 294 aaKnown RBP11.13□□□□□ -0.63
CDC42BPA-202ENST00000366764 BCL7AQ4VC05 210 aa11.13□□□□□ -0.63
CDC42BPA-202ENST00000366764 FAM217AQ8IXS0 508 aa11.13□□□□□ -0.63
CDC42BPA-202ENST00000366764 KCNK6Q9Y257 313 aa11.13□□□□□ -0.63
CDC42BPA-202ENST00000366764 CXorf51AA0A1B0GTR3 108 aa11.13□□□□□ -0.63
CDC42BPA-202ENST00000366764 SMAD6O43541 496 aaKnown RBP11.13□□□□□ -0.63
CDC42BPA-202ENST00000366764 PCDHGA12O60330 932 aa11.13□□□□□ -0.63
CDC42BPA-202ENST00000366764 PRSS3P35030 304 aa11.13□□□□□ -0.63
CDC42BPA-202ENST00000366764 LRIT3Q3SXY7 679 aa11.13□□□□□ -0.63
CDC42BPA-202ENST00000366764 BTN2A1Q7KYR7 527 aa11.13□□□□□ -0.63
CDC42BPA-202ENST00000366764 FTMTQ8N4E7 242 aa11.13□□□□□ -0.63
CDC42BPA-202ENST00000366764 ZNF480Q8WV37 535 aa11.13□□□□□ -0.63
CDC42BPA-202ENST00000366764 CENPOQ9BU64 300 aa11.13□□□□□ -0.63
CDC42BPA-202ENST00000366764 KCNK12Q9HB15 430 aa11.13□□□□□ -0.63
CDC42BPA-202ENST00000366764 CTDSP2O14595 271 aa11.13□□□□□ -0.63
CDC42BPA-202ENST00000366764 RNF13O43567 381 aa11.13□□□□□ -0.63
CDC42BPA-202ENST00000366764 C5AR1P21730 350 aa11.13□□□□□ -0.63
CDC42BPA-202ENST00000366764 WASP42768 502 aa11.13□□□□□ -0.63
CDC42BPA-202ENST00000366764 MLLT10P55197 1068 aa11.13□□□□□ -0.63
CDC42BPA-202ENST00000366764 MFSD6LQ8IWD5 586 aa11.13□□□□□ -0.63
CDC42BPA-202ENST00000366764 SLC25A36Q96CQ1 311 aa11.13□□□□□ -0.63
CDC42BPA-202ENST00000366764 KLHL15Q96M94 604 aa11.13□□□□□ -0.63
CDC42BPA-202ENST00000366764 TNFRSF10BO14763 440 aa11.13□□□□□ -0.63
CDC42BPA-202ENST00000366764 RHOP08100 348 aa11.13□□□□□ -0.63
CDC42BPA-202ENST00000366764 TAS2R31P59538 309 aa11.13□□□□□ -0.63
CDC42BPA-202ENST00000366764 DHCR24Q15392 516 aa11.13□□□□□ -0.63
CDC42BPA-202ENST00000366764 USP51Q70EK9 711 aa11.13□□□□□ -0.63
CDC42BPA-202ENST00000366764 MED30Q96HR3 178 aa11.13□□□□□ -0.63
CDC42BPA-202ENST00000366764 ZNF587Q96SQ5 575 aaPredicted RBP11.13□□□□□ -0.63
CDC42BPA-202ENST00000366764 GPR52Q9Y2T5 361 aa11.13□□□□□ -0.63
CDC42BPA-202ENST00000366764 PEX14O75381 377 aa11.12□□□□□ -0.63
CDC42BPA-202ENST00000366764 PRKCAP17252 672 aa11.12□□□□□ -0.63
CDC42BPA-202ENST00000366764 GDI2P50395 445 aaKnown RBP11.12□□□□□ -0.63
CDC42BPA-202ENST00000366764 GPR50Q13585 617 aa11.12□□□□□ -0.63
CDC42BPA-202ENST00000366764 PODNL1Q6PEZ8 512 aa11.12□□□□□ -0.63
CDC42BPA-202ENST00000366764 CADM3Q8N126 398 aa11.12□□□□□ -0.63
CDC42BPA-202ENST00000366764 GAL3ST3Q96A11 431 aa11.12□□□□□ -0.63
CDC42BPA-202ENST00000366764 URM1Q9BTM9 101 aaKnown RBP11.12□□□□□ -0.63
CDC42BPA-202ENST00000366764 MMP28Q9H239 520 aa11.12□□□□□ -0.63
CDC42BPA-202ENST00000366764 TESQ9UGI8 421 aaKnown RBP11.12□□□□□ -0.63
CDC42BPA-202ENST00000366764 SLC35A3Q9Y2D2 325 aa11.12□□□□□ -0.63
CDC42BPA-202ENST00000366764 ARRB2P32121 409 aa11.12□□□□□ -0.63
CDC42BPA-202ENST00000366764 CDK10Q15131 360 aa11.12□□□□□ -0.63
CDC42BPA-202ENST00000366764 RPS26P11Q5JNZ5 115 aaPredicted RBP11.12□□□□□ -0.63
CDC42BPA-202ENST00000366764 SLC38A5Q8WUX1 472 aa11.12□□□□□ -0.63
CDC42BPA-202ENST00000366764 ASB6Q9NWX5 421 aa11.12□□□□□ -0.63
CDC42BPA-202ENST00000366764 PCDH10Q9P2E7 1040 aa11.12□□□□□ -0.63
CDC42BPA-202ENST00000366764 RBMXP38159 391 aaKnown RBP11.12□□□□□ -0.63
CDC42BPA-202ENST00000366764 PDE7AQ13946 482 aa11.12□□□□□ -0.63
CDC42BPA-202ENST00000366764 RIMKLAQ8IXN7 391 aa11.12□□□□□ -0.63
CDC42BPA-202ENST00000366764 PATJQ8NI35 1801 aa11.12□□□□□ -0.63
CDC42BPA-202ENST00000366764 M0R3H8 397 aa11.12□□□□□ -0.63
CDC42BPA-202ENST00000366764 PTHP01270 115 aa11.12□□□□□ -0.63
CDC42BPA-202ENST00000366764 HLA-EP13747 358 aa11.12□□□□□ -0.63
CDC42BPA-202ENST00000366764 HIST1H1TP22492 207 aaPredicted RBP11.12□□□□□ -0.63
CDC42BPA-202ENST00000366764 CSNK1A1LQ8N752 337 aa11.12□□□□□ -0.63
CDC42BPA-202ENST00000366764 ZNF366Q8N895 744 aa11.12□□□□□ -0.63
CDC42BPA-202ENST00000366764 PLA2G15Q8NCC3 412 aa11.12□□□□□ -0.63
CDC42BPA-202ENST00000366764 BRIX1Q8TDN6 353 aaKnown RBP11.12□□□□□ -0.63
CDC42BPA-202ENST00000366764 PITX2Q99697 317 aa11.12□□□□□ -0.63
CDC42BPA-202ENST00000366764 TXNL4BQ9NX01 149 aaKnown RBP11.12□□□□□ -0.63
CDC42BPA-202ENST00000366764 TEX10Q9NXF1 929 aaPredicted RBP11.12□□□□□ -0.63
CDC42BPA-202ENST00000366764 NDUFAF4Q9P032 175 aa11.12□□□□□ -0.63
CDC42BPA-202ENST00000366764 A0A1B0GVT2 93 aa11.12□□□□□ -0.63
CDC42BPA-202ENST00000366764 FURINP09958 794 aa11.12□□□□□ -0.63
CDC42BPA-202ENST00000366764 RAB5BP61020 215 aa11.12□□□□□ -0.63
CDC42BPA-202ENST00000366764 GK2Q14410 553 aaPredicted RBP11.12□□□□□ -0.63
CDC42BPA-202ENST00000366764 RHEBQ15382 184 aa11.12□□□□□ -0.63
CDC42BPA-202ENST00000366764 OCLNQ16625 522 aa11.12□□□□□ -0.63
CDC42BPA-202ENST00000366764 OR2L2Q8NH16 312 aa11.12□□□□□ -0.63
CDC42BPA-202ENST00000366764 RPL3LQ92901 407 aaKnown RBP11.12□□□□□ -0.63
CDC42BPA-202ENST00000366764 CNIH4Q9P003 139 aa11.12□□□□□ -0.63
CDC42BPA-202ENST00000366764 ADAMTS4O75173 837 aa11.12□□□□□ -0.63
CDC42BPA-202ENST00000366764 NADSYN1Q6IA69 706 aa11.12□□□□□ -0.63
CDC42BPA-202ENST00000366764 SLC2A12Q8TD20 617 aa11.12□□□□□ -0.63
CDC42BPA-202ENST00000366764 SAMD8Q96LT4 415 aa11.12□□□□□ -0.63
CDC42BPA-202ENST00000366764 SAP130Q9H0E3 1048 aa11.12□□□□□ -0.63
CDC42BPA-202ENST00000366764 PRKAB1Q9Y478 270 aa11.12□□□□□ -0.63
CDC42BPA-202ENST00000366764 ENTPD2Q9Y5L3 495 aa11.12□□□□□ -0.63
CDC42BPA-202ENST00000366764 TCRBV5S2A0A599 114 aa11.12□□□□□ -0.63
CDC42BPA-202ENST00000366764 PRPH2P23942 346 aa11.12□□□□□ -0.63
CDC42BPA-202ENST00000366764 NAA10P41227 235 aaPredicted RBP11.12□□□□□ -0.63
CDC42BPA-202ENST00000366764 ZNF41P51814 821 aaPredicted RBP11.12□□□□□ -0.63
CDC42BPA-202ENST00000366764 KIR2DS3Q14952 304 aa11.12□□□□□ -0.63
CDC42BPA-202ENST00000366764 TMEM207Q6UWW9 146 aa11.12□□□□□ -0.63
CDC42BPA-202ENST00000366764 OR52N1Q8NH53 320 aa11.12□□□□□ -0.63
CDC42BPA-202ENST00000366764 TMEM185BQ9H7F4 350 aa11.12□□□□□ -0.63
CDC42BPA-202ENST00000366764 ISYNA1Q9NPH2 558 aa11.12□□□□□ -0.63
CDC42BPA-202ENST00000366764 M0R036 132 aa11.12□□□□□ -0.63
CDC42BPA-202ENST00000366764 ZNF619Q8N2I2 560 aa11.12□□□□□ -0.63
CDC42BPA-202ENST00000366764 PRRT1Q99946 306 aa11.12□□□□□ -0.63
CDC42BPA-202ENST00000366764 ATG5Q9H1Y0 275 aa11.12□□□□□ -0.63
CDC42BPA-202ENST00000366764 AKIP1Q9NQ31 210 aa11.12□□□□□ -0.63
CDC42BPA-202ENST00000366764 PNO1Q9NRX1 252 aaKnown RBP11.12□□□□□ -0.63
CDC42BPA-202ENST00000366764 HCKP08631 526 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms