RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 B4DXG7 233 aa13.08□□□□□ -0.32
COL6A1-201ENST00000361866 SOCS6O14544 535 aa13.08□□□□□ -0.32
COL6A1-201ENST00000361866 RBBP9O75884 186 aa13.08□□□□□ -0.32
COL6A1-201ENST00000361866 UBXN7O94888 489 aa13.08□□□□□ -0.32
COL6A1-201ENST00000361866 DBIP07108 87 aaKnown RBP13.08□□□□□ -0.32
COL6A1-201ENST00000361866 ZNF806P0C7X5 589 aa13.08□□□□□ -0.32
COL6A1-201ENST00000361866 TYRP1P17643 537 aa13.08□□□□□ -0.32
COL6A1-201ENST00000361866 GRK5P34947 590 aa13.08□□□□□ -0.32
COL6A1-201ENST00000361866 DDOSTP39656 456 aa13.08□□□□□ -0.32
COL6A1-201ENST00000361866 XCR1P46094 333 aa13.08□□□□□ -0.32
COL6A1-201ENST00000361866 CLDN12P56749 244 aa13.08□□□□□ -0.32
COL6A1-201ENST00000361866 PARS2Q7L3T8 475 aaKnown RBP13.08□□□□□ -0.32
COL6A1-201ENST00000361866 TAF8Q7Z7C8 310 aa13.08□□□□□ -0.32
COL6A1-201ENST00000361866 CALHM3Q86XJ0 350 aa13.08□□□□□ -0.32
COL6A1-201ENST00000361866 OR4M2Q8NGB6 313 aa13.08□□□□□ -0.32
COL6A1-201ENST00000361866 ISG20Q96AZ6 181 aaKnown RBP13.08□□□□□ -0.32
COL6A1-201ENST00000361866 C4orf36Q96KX1 117 aa13.08□□□□□ -0.32
COL6A1-201ENST00000361866 CCL26Q9Y258 94 aa13.08□□□□□ -0.32
COL6A1-201ENST00000361866 SPTBP11277 2137 aa13.08□□□□□ -0.32
COL6A1-201ENST00000361866 MEIS3P1A6NDR6 274 aa13.08□□□□□ -0.32
COL6A1-201ENST00000361866 CREBL2O60519 120 aaPredicted RBP13.08□□□□□ -0.32
COL6A1-201ENST00000361866 RP2O75695 350 aa13.08□□□□□ -0.32
COL6A1-201ENST00000361866 ALX3O95076 343 aa13.08□□□□□ -0.32
COL6A1-201ENST00000361866 HRGP04196 525 aa13.08□□□□□ -0.32
COL6A1-201ENST00000361866 APODP05090 189 aa13.08□□□□□ -0.32
COL6A1-201ENST00000361866 SRP9P49458 86 aaKnown RBP13.08□□□□□ -0.32
COL6A1-201ENST00000361866 CLDN2P57739 230 aa13.08□□□□□ -0.32
COL6A1-201ENST00000361866 RAB33AQ14088 237 aa13.08□□□□□ -0.32
COL6A1-201ENST00000361866 GBX1Q14549 363 aa13.08□□□□□ -0.32
COL6A1-201ENST00000361866 SYT14P1Q58G82 188 aa13.08□□□□□ -0.32
COL6A1-201ENST00000361866 POGLUT1Q8NBL1 392 aa13.08□□□□□ -0.32
COL6A1-201ENST00000361866 CHTF18Q8WVB6 975 aa13.08□□□□□ -0.32
COL6A1-201ENST00000361866 METTL17Q9H7H0 456 aaPredicted RBP13.08□□□□□ -0.32
COL6A1-201ENST00000361866 HPF1Q9NWY4 346 aa13.08□□□□□ -0.32
COL6A1-201ENST00000361866 BABAM2Q9NXR7 383 aa13.08□□□□□ -0.32
COL6A1-201ENST00000361866 ATAD5Q96QE3 1844 aa13.08□□□□□ -0.32
COL6A1-201ENST00000361866 TRAV27A0A087WT01 109 aa13.07□□□□□ -0.32
COL6A1-201ENST00000361866 A0A0G2JPF8 293 aa13.07□□□□□ -0.32
COL6A1-201ENST00000361866 KANTRA0A1W2PQU2 76 aa13.07□□□□□ -0.32
COL6A1-201ENST00000361866 HNRNPCL3B7ZW38 293 aa13.07□□□□□ -0.32
COL6A1-201ENST00000361866 HOXC11O43248 304 aaPredicted RBP13.07□□□□□ -0.32
COL6A1-201ENST00000361866 TACSTD2P09758 323 aa13.07□□□□□ -0.32
COL6A1-201ENST00000361866 HNRNPCL4P0DMR1 293 aa13.07□□□□□ -0.32
COL6A1-201ENST00000361866 SCRN3Q0VDG4 424 aa13.07□□□□□ -0.32
COL6A1-201ENST00000361866 SEC23BQ15437 767 aa13.07□□□□□ -0.32
COL6A1-201ENST00000361866 KCTD9Q7L273 389 aa13.07□□□□□ -0.32
COL6A1-201ENST00000361866 NRROSQ86YC3 692 aa13.07□□□□□ -0.32
COL6A1-201ENST00000361866 IL17RDQ8NFM7 739 aa13.07□□□□□ -0.32
COL6A1-201ENST00000361866 NXPE2Q96DL1 559 aa13.07□□□□□ -0.32
COL6A1-201ENST00000361866 OR52D1Q9H346 318 aa13.07□□□□□ -0.32
COL6A1-201ENST00000361866 PLCXD1Q9NUJ7 323 aa13.07□□□□□ -0.32
COL6A1-201ENST00000361866 MYEF2Q9P2K5 600 aaKnown RBP13.07□□□□□ -0.32
COL6A1-201ENST00000361866 CKAP5Q14008 2032 aa13.07□□□□□ -0.32
COL6A1-201ENST00000361866 EDDM13A0A1B0GTR0 161 aa13.07□□□□□ -0.32
COL6A1-201ENST00000361866 TNFRSF10AO00220 468 aa13.07□□□□□ -0.32
COL6A1-201ENST00000361866 CLDN4O14493 209 aa13.07□□□□□ -0.32
COL6A1-201ENST00000361866 DSCR3O14972 297 aa13.07□□□□□ -0.32
COL6A1-201ENST00000361866 KHNYNO15037 678 aaKnown RBP13.07□□□□□ -0.32
COL6A1-201ENST00000361866 SPDEFO95238 335 aa13.07□□□□□ -0.32
COL6A1-201ENST00000361866 HMGA1P17096 107 aaKnown RBP13.07□□□□□ -0.32
COL6A1-201ENST00000361866 BTN1A1Q13410 526 aa13.07□□□□□ -0.32
COL6A1-201ENST00000361866 SLX4IPQ5VYV7 408 aa13.07□□□□□ -0.32
COL6A1-201ENST00000361866 CST9Q5W186 159 aa13.07□□□□□ -0.32
COL6A1-201ENST00000361866 LYPD4Q6UWN0 246 aa13.07□□□□□ -0.32
COL6A1-201ENST00000361866 ACOT4Q8N9L9 421 aa13.07□□□□□ -0.32
COL6A1-201ENST00000361866 WFIKKN2Q8TEU8 576 aa13.07□□□□□ -0.32
COL6A1-201ENST00000361866 GABARAPL3Q9BY60 117 aa13.07□□□□□ -0.32
COL6A1-201ENST00000361866 MVB12BQ9H7P6 319 aa13.07□□□□□ -0.32
COL6A1-201ENST00000361866 KLHL42Q9P2K6 505 aa13.07□□□□□ -0.32
COL6A1-201ENST00000361866 AGR2O95994 175 aa13.07□□□□□ -0.32
COL6A1-201ENST00000361866 CSF3P09919 207 aa13.07□□□□□ -0.32
COL6A1-201ENST00000361866 DRD2P14416 443 aa13.07□□□□□ -0.32
COL6A1-201ENST00000361866 PTH2RP49190 550 aa13.07□□□□□ -0.32
COL6A1-201ENST00000361866 CCR6P51684 374 aa13.07□□□□□ -0.32
COL6A1-201ENST00000361866 SAXO2Q658L1 398 aa13.07□□□□□ -0.32
COL6A1-201ENST00000361866 RAB12Q6IQ22 244 aa13.07□□□□□ -0.32
COL6A1-201ENST00000361866 TCTN3Q6NUS6 607 aa13.07□□□□□ -0.32
COL6A1-201ENST00000361866 CLDN22Q8N7P3 220 aa13.07□□□□□ -0.32
COL6A1-201ENST00000361866 SDR9C7Q8NEX9 313 aa13.07□□□□□ -0.32
COL6A1-201ENST00000361866 PHOSPHO1Q8TCT1 267 aa13.07□□□□□ -0.32
COL6A1-201ENST00000361866 MSLNLQ96KJ4 702 aa13.07□□□□□ -0.32
COL6A1-201ENST00000361866 RAB11FIP5Q9BXF6 653 aa13.07□□□□□ -0.32
COL6A1-201ENST00000361866 GABARAPL1Q9H0R8 117 aa13.07□□□□□ -0.32
COL6A1-201ENST00000361866 TMEM185BQ9H7F4 350 aa13.07□□□□□ -0.32
COL6A1-201ENST00000361866 TMPRSS11EQ9UL52 423 aa13.07□□□□□ -0.32
COL6A1-201ENST00000361866 TRIM3O75382 744 aaPredicted RBP13.06□□□□□ -0.32
COL6A1-201ENST00000361866 ZNF432O94892 652 aa13.06□□□□□ -0.32
COL6A1-201ENST00000361866 LATS1O95835 1130 aa13.06□□□□□ -0.32
COL6A1-201ENST00000361866 BMP1P13497 986 aa13.06□□□□□ -0.32
COL6A1-201ENST00000361866 GABRA5P31644 462 aa13.06□□□□□ -0.32
COL6A1-201ENST00000361866 CEBPGP53567 150 aa13.06□□□□□ -0.32
COL6A1-201ENST00000361866 PDGFRLQ15198 375 aa13.06□□□□□ -0.32
COL6A1-201ENST00000361866 P2RY14Q15391 338 aa13.06□□□□□ -0.32
COL6A1-201ENST00000361866 DHCR24Q15392 516 aa13.06□□□□□ -0.32
COL6A1-201ENST00000361866 KLHL26Q53HC5 615 aa13.06□□□□□ -0.32
COL6A1-201ENST00000361866 ENTPD8Q5MY95 495 aa13.06□□□□□ -0.32
COL6A1-201ENST00000361866 GAREM2Q75VX8 874 aa13.06□□□□□ -0.32
COL6A1-201ENST00000361866 PEG10Q86TG7 708 aaKnown RBP13.06□□□□□ -0.32
COL6A1-201ENST00000361866 LNX2Q8N448 690 aa13.06□□□□□ -0.32
COL6A1-201ENST00000361866 MS4A15Q8N5U1 240 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms