RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 RAB8BQ92930 207 aa12.54□□□□□ -0.4
SRGAP3-201ENST00000360413 NECTIN4Q96NY8 510 aa12.54□□□□□ -0.4
SRGAP3-201ENST00000360413 F6UZH7 168 aa12.54□□□□□ -0.4
SRGAP3-201ENST00000360413 SERPINE2P07093 398 aa12.54□□□□□ -0.4
SRGAP3-201ENST00000360413 HOXA10P31260 410 aaPredicted RBP12.54□□□□□ -0.4
SRGAP3-201ENST00000360413 DAP3P51398 398 aaKnown RBP12.54□□□□□ -0.4
SRGAP3-201ENST00000360413 YIF1BQ5BJH7 314 aa12.54□□□□□ -0.4
SRGAP3-201ENST00000360413 FAM182AQ5T1J6 154 aa12.54□□□□□ -0.4
SRGAP3-201ENST00000360413 CNKSR3Q6P9H4 555 aa12.54□□□□□ -0.4
SRGAP3-201ENST00000360413 ZNF454Q8N9F8 522 aa12.54□□□□□ -0.4
SRGAP3-201ENST00000360413 GIMAP1Q8WWP7 306 aa12.54□□□□□ -0.4
SRGAP3-201ENST00000360413 ZNF681Q96N22 645 aa12.54□□□□□ -0.4
SRGAP3-201ENST00000360413 GOLGA2P5Q9HBQ8 144 aa12.54□□□□□ -0.4
SRGAP3-201ENST00000360413 ANKRD66B4E2M5 251 aa12.54□□□□□ -0.4
SRGAP3-201ENST00000360413 B4GALT2O60909 372 aa12.54□□□□□ -0.4
SRGAP3-201ENST00000360413 MGST1P10620 155 aaKnown RBP12.54□□□□□ -0.4
SRGAP3-201ENST00000360413 TCTE1Q5JU00 501 aa12.54□□□□□ -0.4
SRGAP3-201ENST00000360413 MAMDC2Q7Z304 686 aaPredicted RBP12.54□□□□□ -0.4
SRGAP3-201ENST00000360413 OR4K1Q8NGD4 311 aa12.54□□□□□ -0.4
SRGAP3-201ENST00000360413 SLC35B2Q8TB61 432 aa12.54□□□□□ -0.4
SRGAP3-201ENST00000360413 FOXRED1Q96CU9 486 aaPredicted RBP12.54□□□□□ -0.4
SRGAP3-201ENST00000360413 SMIM3Q9BZL3 60 aa12.54□□□□□ -0.4
SRGAP3-201ENST00000360413 FN3KRPQ9HA64 309 aa12.54□□□□□ -0.4
SRGAP3-201ENST00000360413 SMCO4Q9NRQ5 59 aa12.54□□□□□ -0.4
SRGAP3-201ENST00000360413 DEPDC5O75140 1603 aa12.54□□□□□ -0.4
SRGAP3-201ENST00000360413 DIP2CQ9Y2E4 1556 aa12.54□□□□□ -0.4
SRGAP3-201ENST00000360413 A0A087WZY1 265 aa12.54□□□□□ -0.4
SRGAP3-201ENST00000360413 A8MUA0 341 aa12.54□□□□□ -0.4
SRGAP3-201ENST00000360413 ZNF736B4DX44 427 aaPredicted RBP12.54□□□□□ -0.4
SRGAP3-201ENST00000360413 H0Y8G0 127 aa12.54□□□□□ -0.4
SRGAP3-201ENST00000360413 STK17BO94768 372 aa12.54□□□□□ -0.4
SRGAP3-201ENST00000360413 PIGRP01833 764 aa12.54□□□□□ -0.4
SRGAP3-201ENST00000360413 FABP1P07148 127 aa12.54□□□□□ -0.4
SRGAP3-201ENST00000360413 C8orf89P0DMQ9 161 aa12.54□□□□□ -0.4
SRGAP3-201ENST00000360413 APOFQ13790 326 aa12.54□□□□□ -0.4
SRGAP3-201ENST00000360413 GTF2H5Q6ZYL4 71 aa12.54□□□□□ -0.4
SRGAP3-201ENST00000360413 KANSL1Q7Z3B3 1105 aa12.54□□□□□ -0.4
SRGAP3-201ENST00000360413 LRRC25Q8N386 305 aaPredicted RBP12.54□□□□□ -0.4
SRGAP3-201ENST00000360413 AKT1S1Q96B36 256 aa12.54□□□□□ -0.4
SRGAP3-201ENST00000360413 CUTCQ9NTM9 273 aa12.54□□□□□ -0.4
SRGAP3-201ENST00000360413 PCDHB10Q9UN67 800 aa12.54□□□□□ -0.4
SRGAP3-201ENST00000360413 CEPT1Q9Y6K0 416 aa12.54□□□□□ -0.4
SRGAP3-201ENST00000360413 C2orf78A6NCI8 922 aa12.54□□□□□ -0.4
SRGAP3-201ENST00000360413 PPP1R2P9O14990 202 aa12.54□□□□□ -0.4
SRGAP3-201ENST00000360413 KCNK5O95279 499 aa12.54□□□□□ -0.4
SRGAP3-201ENST00000360413 CASP3P42574 277 aa12.54□□□□□ -0.4
SRGAP3-201ENST00000360413 SLC6A8P48029 635 aa12.54□□□□□ -0.4
SRGAP3-201ENST00000360413 MPPED2Q15777 294 aa12.54□□□□□ -0.4
SRGAP3-201ENST00000360413 ARL14EPQ8N8R7 260 aaPredicted RBP12.54□□□□□ -0.4
SRGAP3-201ENST00000360413 SFXN5Q8TD22 340 aa12.54□□□□□ -0.4
SRGAP3-201ENST00000360413 MMABQ96EY8 250 aaPredicted RBP12.54□□□□□ -0.4
SRGAP3-201ENST00000360413 A6NIZ1 184 aa12.54□□□□□ -0.4
SRGAP3-201ENST00000360413 NDUFV2P19404 249 aa12.54□□□□□ -0.4
SRGAP3-201ENST00000360413 FXYD4P59646 89 aa12.54□□□□□ -0.4
SRGAP3-201ENST00000360413 RAP1BP61224 184 aa12.54□□□□□ -0.4
SRGAP3-201ENST00000360413 RAP1AP62834 184 aa12.54□□□□□ -0.4
SRGAP3-201ENST00000360413 CSNK2A1P68400 391 aaPredicted RBP12.54□□□□□ -0.4
SRGAP3-201ENST00000360413 PLCXD2Q0VAA5 305 aa12.54□□□□□ -0.4
SRGAP3-201ENST00000360413 TMEM201Q5SNT2 666 aa12.54□□□□□ -0.4
SRGAP3-201ENST00000360413 CSNK2A3Q8NEV1 391 aa12.54□□□□□ -0.4
SRGAP3-201ENST00000360413 LMX1AQ8TE12 382 aa12.54□□□□□ -0.4
SRGAP3-201ENST00000360413 CD244Q9BZW8 370 aa12.54□□□□□ -0.4
SRGAP3-201ENST00000360413 K7EQM0 130 aa12.53□□□□□ -0.4
SRGAP3-201ENST00000360413 IMPA2O14732 288 aa12.53□□□□□ -0.4
SRGAP3-201ENST00000360413 RDH16O75452 317 aa12.53□□□□□ -0.4
SRGAP3-201ENST00000360413 USP2O75604 605 aaPredicted RBP12.53□□□□□ -0.4
SRGAP3-201ENST00000360413 CRTAPO75718 401 aaPredicted RBP12.53□□□□□ -0.4
SRGAP3-201ENST00000360413 GSRP00390 522 aa12.53□□□□□ -0.4
SRGAP3-201ENST00000360413 CX3CR1P49238 355 aa12.53□□□□□ -0.4
SRGAP3-201ENST00000360413 PPT1P50897 306 aa12.53□□□□□ -0.4
SRGAP3-201ENST00000360413 ABHD17BQ5VST6 288 aa12.53□□□□□ -0.4
SRGAP3-201ENST00000360413 TMEM200AQ86VY9 491 aa12.53□□□□□ -0.4
SRGAP3-201ENST00000360413 SLC2A12Q8TD20 617 aa12.53□□□□□ -0.4
SRGAP3-201ENST00000360413 TFAP2BQ92481 460 aa12.53□□□□□ -0.4
SRGAP3-201ENST00000360413 UBL7Q96S82 380 aaPredicted RBP12.53□□□□□ -0.4
SRGAP3-201ENST00000360413 TESQ9UGI8 421 aaKnown RBP12.53□□□□□ -0.4
SRGAP3-201ENST00000360413 FAM208AQ9UK61 1670 aaKnown RBP12.53□□□□□ -0.4
SRGAP3-201ENST00000360413 AGAP14A8MT82 685 aa12.53□□□□□ -0.4
SRGAP3-201ENST00000360413 RAB3DO95716 219 aa12.53□□□□□ -0.4
SRGAP3-201ENST00000360413 STATHP02808 62 aa12.53□□□□□ -0.4
SRGAP3-201ENST00000360413 OR12D1P0DN82 309 aa12.53□□□□□ -0.4
SRGAP3-201ENST00000360413 F2RL1P55085 397 aa12.53□□□□□ -0.4
SRGAP3-201ENST00000360413 OR52E8Q6IFG1 317 aa12.53□□□□□ -0.4
SRGAP3-201ENST00000360413 SLC30A7Q8NEW0 376 aa12.53□□□□□ -0.4
SRGAP3-201ENST00000360413 FNDC9Q8TBE3 224 aa12.53□□□□□ -0.4
SRGAP3-201ENST00000360413 SH3RF2Q8TEC5 729 aa12.53□□□□□ -0.4
SRGAP3-201ENST00000360413 HCAR1Q9BXC0 346 aa12.53□□□□□ -0.4
SRGAP3-201ENST00000360413 MYEF2Q9P2K5 600 aaKnown RBP12.53□□□□□ -0.4
SRGAP3-201ENST00000360413 TAC3Q9UHF0 121 aa12.53□□□□□ -0.4
SRGAP3-201ENST00000360413 FAM186AA6NE01 2351 aa12.53□□□□□ -0.4
SRGAP3-201ENST00000360413 INHAP05111 366 aa12.53□□□□□ -0.4
SRGAP3-201ENST00000360413 SYN1P17600 705 aa12.53□□□□□ -0.4
SRGAP3-201ENST00000360413 GRM2Q14416 872 aa12.53□□□□□ -0.4
SRGAP3-201ENST00000360413 TAC4Q86UU9 113 aa12.53□□□□□ -0.4
SRGAP3-201ENST00000360413 MINDY1Q8N5J2 469 aa12.53□□□□□ -0.4
SRGAP3-201ENST00000360413 ZNF75AQ96N20 296 aa12.53□□□□□ -0.4
SRGAP3-201ENST00000360413 OR11A1Q9GZK7 315 aa12.53□□□□□ -0.4
SRGAP3-201ENST00000360413 TAS2R16Q9NYV7 291 aa12.53□□□□□ -0.4
SRGAP3-201ENST00000360413 UNCXA6NJT0 531 aa12.53□□□□□ -0.4
SRGAP3-201ENST00000360413 RAB3AP20336 220 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms