RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 FAM69BQ5VUD6 431 aa9.17□□□□□ -0.94
CUX1-203ENST00000360264 TLDC1Q6P9B6 456 aa9.17□□□□□ -0.94
CUX1-203ENST00000360264 ELMOD2Q8IZ81 293 aa9.17□□□□□ -0.94
CUX1-203ENST00000360264 OR11L1Q8NGX0 322 aa9.17□□□□□ -0.94
CUX1-203ENST00000360264 ARSBP15848 533 aa9.17□□□□□ -0.94
CUX1-203ENST00000360264 GPR139Q6DWJ6 353 aa9.17□□□□□ -0.94
CUX1-203ENST00000360264 NAPRTQ6XQN6 538 aa9.17□□□□□ -0.94
CUX1-203ENST00000360264 TEPSINQ96N21 525 aa9.17□□□□□ -0.94
CUX1-203ENST00000360264 BIRC8Q96P09 236 aa9.17□□□□□ -0.94
CUX1-203ENST00000360264 UBL7Q96S82 380 aaPredicted RBP9.17□□□□□ -0.94
CUX1-203ENST00000360264 MTHFD2LQ9H903 347 aaPredicted RBP9.17□□□□□ -0.94
CUX1-203ENST00000360264 A6NHS1 94 aa9.17□□□□□ -0.94
CUX1-203ENST00000360264 UGT2B7P16662 529 aa9.17□□□□□ -0.94
CUX1-203ENST00000360264 TCEAL1Q15170 157 aa9.17□□□□□ -0.94
CUX1-203ENST00000360264 KCTD20Q7Z5Y7 419 aa9.17□□□□□ -0.94
CUX1-203ENST00000360264 REV1Q9UBZ9 1251 aa9.17□□□□□ -0.94
CUX1-203ENST00000360264 PCDHA9Q9Y5H5 950 aa9.17□□□□□ -0.94
CUX1-203ENST00000360264 HEXAP06865 529 aa9.17□□□□□ -0.94
CUX1-203ENST00000360264 CHATP28329 748 aa9.17□□□□□ -0.94
CUX1-203ENST00000360264 ZNF767PQ75MW2 155 aa9.17□□□□□ -0.94
CUX1-203ENST00000360264 FNDC9Q8TBE3 224 aa9.17□□□□□ -0.94
CUX1-203ENST00000360264 CNOT9Q92600 299 aaKnown RBP9.17□□□□□ -0.94
CUX1-203ENST00000360264 METTL2AQ96IZ6 378 aaKnown RBP9.17□□□□□ -0.94
CUX1-203ENST00000360264 OR5B2Q96R09 309 aa9.17□□□□□ -0.94
CUX1-203ENST00000360264 SLC35F4A4IF30 521 aa9.17□□□□□ -0.94
CUX1-203ENST00000360264 ZNF736B4DX44 427 aaPredicted RBP9.17□□□□□ -0.94
CUX1-203ENST00000360264 ZFAND5O76080 213 aa9.17□□□□□ -0.94
CUX1-203ENST00000360264 ZNF136P52737 540 aa9.17□□□□□ -0.94
CUX1-203ENST00000360264 PINK1Q9BXM7 581 aa9.17□□□□□ -0.94
CUX1-203ENST00000360264 MAP2K3P46734 347 aa9.17□□□□□ -0.94
CUX1-203ENST00000360264 PQLC3Q8N755 202 aa9.17□□□□□ -0.94
CUX1-203ENST00000360264 ZFAND1Q8TCF1 268 aa9.17□□□□□ -0.94
CUX1-203ENST00000360264 SCRN2Q96FV2 425 aa9.17□□□□□ -0.94
CUX1-203ENST00000360264 RADILQ96JH8 1075 aa9.17□□□□□ -0.94
CUX1-203ENST00000360264 RNF38Q9H0F5 515 aa9.17□□□□□ -0.94
CUX1-203ENST00000360264 OR6C2Q9NZP2 312 aa9.17□□□□□ -0.94
CUX1-203ENST00000360264 MED13LQ71F56 2210 aa9.17□□□□□ -0.94
CUX1-203ENST00000360264 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.17□□□□□ -0.94
CUX1-203ENST00000360264 WNT7AO00755 349 aa9.17□□□□□ -0.94
CUX1-203ENST00000360264 RUNX3Q13761 415 aa9.17□□□□□ -0.94
CUX1-203ENST00000360264 FAM69AQ5T7M9 428 aa9.17□□□□□ -0.94
CUX1-203ENST00000360264 ACVR1CQ8NER5 493 aa9.17□□□□□ -0.94
CUX1-203ENST00000360264 FIBINQ8TAL6 211 aa9.17□□□□□ -0.94
CUX1-203ENST00000360264 CHRDQ9H2X0 955 aa9.17□□□□□ -0.94
CUX1-203ENST00000360264 OR2S2Q9NQN1 319 aa9.17□□□□□ -0.94
CUX1-203ENST00000360264 FREM3P0C091 2139 aa9.17□□□□□ -0.94
CUX1-203ENST00000360264 SERPINA5P05154 406 aa9.16□□□□□ -0.94
CUX1-203ENST00000360264 CTSAP10619 480 aa9.16□□□□□ -0.94
CUX1-203ENST00000360264 FNTBP49356 437 aa9.16□□□□□ -0.94
CUX1-203ENST00000360264 RBM39Q14498 530 aaKnown RBP9.16□□□□□ -0.94
CUX1-203ENST00000360264 STK35Q8TDR2 534 aa9.16□□□□□ -0.94
CUX1-203ENST00000360264 MAL2Q969L2 176 aa9.16□□□□□ -0.94
CUX1-203ENST00000360264 SLC25A31Q9H0C2 315 aa9.16□□□□□ -0.94
CUX1-203ENST00000360264 CREBZFQ9NS37 354 aa9.16□□□□□ -0.94
CUX1-203ENST00000360264 J3QRK9 145 aa9.16□□□□□ -0.94
CUX1-203ENST00000360264 STC2O76061 302 aa9.16□□□□□ -0.94
CUX1-203ENST00000360264 PROS1P07225 676 aa9.16□□□□□ -0.94
CUX1-203ENST00000360264 CDH15P55291 814 aa9.16□□□□□ -0.94
CUX1-203ENST00000360264 TECPR1Q7Z6L1 1165 aa9.16□□□□□ -0.94
CUX1-203ENST00000360264 TMEM74Q96NL1 305 aa9.16□□□□□ -0.94
CUX1-203ENST00000360264 HINT2Q9BX68 163 aa9.16□□□□□ -0.94
CUX1-203ENST00000360264 GNG13Q9P2W3 67 aa9.16□□□□□ -0.94
CUX1-203ENST00000360264 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.16□□□□□ -0.94
CUX1-203ENST00000360264 FCER2P06734 321 aa9.16□□□□□ -0.94
CUX1-203ENST00000360264 PCLAFQ15004 111 aa9.16□□□□□ -0.94
CUX1-203ENST00000360264 ADAMTS19Q8TE59 1207 aa9.16□□□□□ -0.94
CUX1-203ENST00000360264 RAB3BP20337 219 aa9.16□□□□□ -0.94
CUX1-203ENST00000360264 FDXRP22570 491 aa9.16□□□□□ -0.94
CUX1-203ENST00000360264 ZNFX1Q9P2E3 1918 aaKnown RBP9.16□□□□□ -0.94
CUX1-203ENST00000360264 OR8U9P0C7N5 309 aa9.16□□□□□ -0.94
CUX1-203ENST00000360264 WBP2NLQ6ICG8 309 aa9.16□□□□□ -0.94
CUX1-203ENST00000360264 KCNIP2Q9NS61 270 aa9.16□□□□□ -0.94
CUX1-203ENST00000360264 A0A1W2PPV4 95 aa9.16□□□□□ -0.94
CUX1-203ENST00000360264 GALR3O60755 368 aaPredicted RBP9.16□□□□□ -0.94
CUX1-203ENST00000360264 MED6O75586 246 aa9.16□□□□□ -0.94
CUX1-203ENST00000360264 MAGEA6P43360 314 aa9.16□□□□□ -0.94
CUX1-203ENST00000360264 CD97P48960 835 aa9.16□□□□□ -0.94
CUX1-203ENST00000360264 MEP1AQ16819 746 aa9.16□□□□□ -0.94
CUX1-203ENST00000360264 CLVS2Q5SYC1 327 aa9.16□□□□□ -0.94
CUX1-203ENST00000360264 METTL27Q8N6F8 245 aaPredicted RBP9.16□□□□□ -0.94
CUX1-203ENST00000360264 RAB8BQ92930 207 aa9.16□□□□□ -0.94
CUX1-203ENST00000360264 CDHR4A6H8M9 788 aa9.16□□□□□ -0.94
CUX1-203ENST00000360264 CXorf49A8MYA2 514 aaPredicted RBP9.16□□□□□ -0.94
CUX1-203ENST00000360264 NCS1P62166 190 aa9.16□□□□□ -0.94
CUX1-203ENST00000360264 PPP1R3AQ16821 1122 aa9.16□□□□□ -0.94
CUX1-203ENST00000360264 GPR157Q5UAW9 335 aa9.16□□□□□ -0.94
CUX1-203ENST00000360264 PRAMEF8Q5VWM4 474 aa9.16□□□□□ -0.94
CUX1-203ENST00000360264 PRAMEF7Q5VXH5 474 aa9.16□□□□□ -0.94
CUX1-203ENST00000360264 ZNF808Q8N4W9 903 aaPredicted RBP9.16□□□□□ -0.94
CUX1-203ENST00000360264 PHOSPHO2Q8TCD6 241 aa9.16□□□□□ -0.94
CUX1-203ENST00000360264 BTF3L4Q96K17 158 aa9.16□□□□□ -0.94
CUX1-203ENST00000360264 HTRA2O43464 458 aaPredicted RBP9.16□□□□□ -0.94
CUX1-203ENST00000360264 PTTG1O95997 202 aa9.16□□□□□ -0.94
CUX1-203ENST00000360264 ELK4P28324 431 aa9.16□□□□□ -0.94
CUX1-203ENST00000360264 OR7G2Q8NG99 324 aa9.16□□□□□ -0.94
CUX1-203ENST00000360264 ISOC1Q96CN7 298 aa9.16□□□□□ -0.94
CUX1-203ENST00000360264 ALG8Q9BVK2 526 aa9.16□□□□□ -0.94
CUX1-203ENST00000360264 KLHL9Q9P2J3 617 aa9.16□□□□□ -0.94
CUX1-203ENST00000360264 ZNF337Q9Y3M9 751 aa9.16□□□□□ -0.94
CUX1-203ENST00000360264 KIR2DL3P43628 341 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 131.5 ms