RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 TTC29Q8NA56 475 aaPredicted RBP11.8□□□□□ -0.52
GGPS1-202ENST00000358966 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.8□□□□□ -0.52
GGPS1-202ENST00000358966 GEMIN6Q8WXD5 167 aaKnown RBP11.8□□□□□ -0.52
GGPS1-202ENST00000358966 SNAPC3Q92966 411 aa11.8□□□□□ -0.52
GGPS1-202ENST00000358966 SLC35A4Q96G79 324 aa11.8□□□□□ -0.52
GGPS1-202ENST00000358966 GON7Q9BXV9 100 aa11.8□□□□□ -0.52
GGPS1-202ENST00000358966 RASSF1Q9NS23 344 aa11.8□□□□□ -0.52
GGPS1-202ENST00000358966 KRT84Q9NSB2 600 aa11.8□□□□□ -0.52
GGPS1-202ENST00000358966 SLC6A14Q9UN76 642 aa11.8□□□□□ -0.52
GGPS1-202ENST00000358966 NTNG1Q9Y2I2 539 aa11.8□□□□□ -0.52
GGPS1-202ENST00000358966 GPR55Q9Y2T6 319 aaPredicted RBP11.8□□□□□ -0.52
GGPS1-202ENST00000358966 BET1O15155 118 aa11.79□□□□□ -0.52
GGPS1-202ENST00000358966 XPNPEP2O43895 674 aa11.79□□□□□ -0.52
GGPS1-202ENST00000358966 BCAS1O75363 584 aaPredicted RBP11.79□□□□□ -0.52
GGPS1-202ENST00000358966 MAOAP21397 527 aa11.79□□□□□ -0.52
GGPS1-202ENST00000358966 CD40LGP29965 261 aa11.79□□□□□ -0.52
GGPS1-202ENST00000358966 TLX1P31314 330 aaPredicted RBP11.79□□□□□ -0.52
GGPS1-202ENST00000358966 XCR1P46094 333 aa11.79□□□□□ -0.52
GGPS1-202ENST00000358966 KHKP50053 298 aa11.79□□□□□ -0.52
GGPS1-202ENST00000358966 CEBPEQ15744 281 aa11.79□□□□□ -0.52
GGPS1-202ENST00000358966 NNATQ16517 81 aa11.79□□□□□ -0.52
GGPS1-202ENST00000358966 SMN1Q16637 294 aaKnown RBP11.79□□□□□ -0.52
GGPS1-202ENST00000358966 DUSP5Q16690 384 aa11.79□□□□□ -0.52
GGPS1-202ENST00000358966 YIF1BQ5BJH7 314 aa11.79□□□□□ -0.52
GGPS1-202ENST00000358966 CCDC71Q8IV32 467 aaPredicted RBP11.79□□□□□ -0.52
GGPS1-202ENST00000358966 LGI4Q8N135 537 aa11.79□□□□□ -0.52
GGPS1-202ENST00000358966 DNAJC22Q8N4W6 341 aa11.79□□□□□ -0.52
GGPS1-202ENST00000358966 PIK3C3Q8NEB9 887 aa11.79□□□□□ -0.52
GGPS1-202ENST00000358966 AHCYL2Q96HN2 611 aaKnown RBP11.79□□□□□ -0.52
GGPS1-202ENST00000358966 CEP19Q96LK0 163 aa11.79□□□□□ -0.52
GGPS1-202ENST00000358966 DUSP15Q9H1R2 295 aaPredicted RBP11.79□□□□□ -0.52
GGPS1-202ENST00000358966 GHITMQ9H3K2 345 aa11.79□□□□□ -0.52
GGPS1-202ENST00000358966 ANKHQ9HCJ1 492 aa11.79□□□□□ -0.52
GGPS1-202ENST00000358966 ACER3Q9NUN7 267 aa11.79□□□□□ -0.52
GGPS1-202ENST00000358966 USE1Q9NZ43 259 aa11.79□□□□□ -0.52
GGPS1-202ENST00000358966 IFT80Q9P2H3 777 aaPredicted RBP11.79□□□□□ -0.52
GGPS1-202ENST00000358966 DHCR7Q9UBM7 475 aaKnown RBP11.79□□□□□ -0.52
GGPS1-202ENST00000358966 C3orf18Q9UK00 162 aa11.79□□□□□ -0.52
GGPS1-202ENST00000358966 ATXN7L1Q9ULK2 861 aaPredicted RBP11.79□□□□□ -0.52
GGPS1-202ENST00000358966 BCKDKO14874 412 aa11.79□□□□□ -0.52
GGPS1-202ENST00000358966 SEC14L2O76054 403 aa11.79□□□□□ -0.52
GGPS1-202ENST00000358966 HPRP00739 348 aa11.79□□□□□ -0.52
GGPS1-202ENST00000358966 IFNW1P05000 195 aa11.79□□□□□ -0.52
GGPS1-202ENST00000358966 MAN2A2P49641 1150 aa11.79□□□□□ -0.52
GGPS1-202ENST00000358966 ST13P50502 369 aaKnown RBP11.79□□□□□ -0.52
GGPS1-202ENST00000358966 SEC23BQ15437 767 aa11.79□□□□□ -0.52
GGPS1-202ENST00000358966 AGAP6Q5VW22 663 aa11.79□□□□□ -0.52
GGPS1-202ENST00000358966 TCTN3Q6NUS6 607 aa11.79□□□□□ -0.52
GGPS1-202ENST00000358966 SLC36A4Q6YBV0 504 aa11.79□□□□□ -0.52
GGPS1-202ENST00000358966 TMPRSS9Q7Z410 1059 aa11.79□□□□□ -0.52
GGPS1-202ENST00000358966 C17orf82Q86X59 251 aaPredicted RBP11.79□□□□□ -0.52
GGPS1-202ENST00000358966 OR10G2Q8NGC3 310 aa11.79□□□□□ -0.52
GGPS1-202ENST00000358966 PIGKQ92643 395 aa11.79□□□□□ -0.52
GGPS1-202ENST00000358966 MMABQ96EY8 250 aaPredicted RBP11.79□□□□□ -0.52
GGPS1-202ENST00000358966 AGAP4Q96P64 663 aa11.79□□□□□ -0.52
GGPS1-202ENST00000358966 NUDT22Q9BRQ3 303 aa11.79□□□□□ -0.52
GGPS1-202ENST00000358966 SLC38A1Q9H2H9 487 aa11.79□□□□□ -0.52
GGPS1-202ENST00000358966 ZC4H2Q9NQZ6 224 aa11.79□□□□□ -0.52
GGPS1-202ENST00000358966 TNFRSF10DQ9UBN6 386 aa11.79□□□□□ -0.52
GGPS1-202ENST00000358966 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.78□□□□□ -0.52
GGPS1-202ENST00000358966 NOS1APO75052 506 aaPredicted RBP11.78□□□□□ -0.52
GGPS1-202ENST00000358966 SLITRK5O94991 958 aa11.78□□□□□ -0.52
GGPS1-202ENST00000358966 IGFBP1P08833 259 aaPredicted RBP11.78□□□□□ -0.52
GGPS1-202ENST00000358966 FMO3P31513 532 aa11.78□□□□□ -0.52
GGPS1-202ENST00000358966 OR1D4P47884 311 aa11.78□□□□□ -0.52
GGPS1-202ENST00000358966 CRISP3P54108 245 aa11.78□□□□□ -0.52
GGPS1-202ENST00000358966 IL5RAQ01344 420 aa11.78□□□□□ -0.52
GGPS1-202ENST00000358966 DBPQ10586 325 aaPredicted RBP11.78□□□□□ -0.52
GGPS1-202ENST00000358966 LYSMD4Q5XG99 296 aa11.78□□□□□ -0.52
GGPS1-202ENST00000358966 MFSD12Q6NUT3 480 aa11.78□□□□□ -0.52
GGPS1-202ENST00000358966 TMEM64Q6YI46 380 aa11.78□□□□□ -0.52
GGPS1-202ENST00000358966 SPATC1Q76KD6 591 aa11.78□□□□□ -0.52
GGPS1-202ENST00000358966 LYSMD2Q8IV50 215 aa11.78□□□□□ -0.52
GGPS1-202ENST00000358966 ZNF555Q8NEP9 628 aa11.78□□□□□ -0.52
GGPS1-202ENST00000358966 OR56A1Q8NGH5 318 aa11.78□□□□□ -0.52
GGPS1-202ENST00000358966 OR6T1Q8NGN1 323 aa11.78□□□□□ -0.52
GGPS1-202ENST00000358966 PROX1Q92786 737 aa11.78□□□□□ -0.52
GGPS1-202ENST00000358966 ANKRD9Q96BM1 317 aaPredicted RBP11.78□□□□□ -0.52
GGPS1-202ENST00000358966 TMEM80Q96HE8 168 aa11.78□□□□□ -0.52
GGPS1-202ENST00000358966 SMOC1Q9H4F8 434 aa11.78□□□□□ -0.52
GGPS1-202ENST00000358966 DIMT1Q9UNQ2 313 aaKnown RBP11.78□□□□□ -0.52
GGPS1-202ENST00000358966 CHST2Q9Y4C5 530 aa11.78□□□□□ -0.52
GGPS1-202ENST00000358966 PMF1-BGLAPU3KQ54 211 aa11.78□□□□□ -0.52
GGPS1-202ENST00000358966 DMXL1Q9Y485 3027 aa11.78□□□□□ -0.52
GGPS1-202ENST00000358966 CACNA1HO95180 2353 aa11.78□□□□□ -0.52
GGPS1-202ENST00000358966 IGHV1OR21-1A0A087WYE8 117 aa11.78□□□□□ -0.52
GGPS1-202ENST00000358966 LILRA5A6NI73 299 aa11.78□□□□□ -0.52
GGPS1-202ENST00000358966 CTDSP2O14595 271 aa11.78□□□□□ -0.52
GGPS1-202ENST00000358966 TOR1AO14656 332 aa11.78□□□□□ -0.52
GGPS1-202ENST00000358966 CPNE6O95741 557 aa11.78□□□□□ -0.52
GGPS1-202ENST00000358966 HOXB1P14653 301 aaPredicted RBP11.78□□□□□ -0.52
GGPS1-202ENST00000358966 ZNF10P21506 573 aaPredicted RBP11.78□□□□□ -0.52
GGPS1-202ENST00000358966 KCNJ5P48544 419 aa11.78□□□□□ -0.52
GGPS1-202ENST00000358966 ARFIP1P53367 373 aa11.78□□□□□ -0.52
GGPS1-202ENST00000358966 CSTF1Q05048 431 aaKnown RBP11.78□□□□□ -0.52
GGPS1-202ENST00000358966 PRTGQ2VWP7 1150 aa11.78□□□□□ -0.52
GGPS1-202ENST00000358966 PRPF38BQ5VTL8 546 aaKnown RBP11.78□□□□□ -0.52
GGPS1-202ENST00000358966 KLHL17Q6TDP4 642 aa11.78□□□□□ -0.52
GGPS1-202ENST00000358966 C16orf62Q7Z3J2 963 aa11.78□□□□□ -0.52
GGPS1-202ENST00000358966 PRSS58Q8IYP2 241 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms