RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 COX6A1P12074 109 aa14.4□□□□□ -0.1
CTSA-202ENST00000354880 RBMS1P29558 406 aaKnown RBP14.4□□□□□ -0.1
CTSA-202ENST00000354880 DCTP40126 519 aa14.4□□□□□ -0.1
CTSA-202ENST00000354880 ATP12AP54707 1039 aa14.4□□□□□ -0.1
CTSA-202ENST00000354880 AQP4P55087 323 aa14.4□□□□□ -0.1
CTSA-202ENST00000354880 PSPHP78330 225 aa14.4□□□□□ -0.1
CTSA-202ENST00000354880 NRF1Q16656 503 aa14.4□□□□□ -0.1
CTSA-202ENST00000354880 PDZK1Q5T2W1 519 aa14.4□□□□□ -0.1
CTSA-202ENST00000354880 PPP4R4Q6NUP7 873 aa14.4□□□□□ -0.1
CTSA-202ENST00000354880 TCTN3Q6NUS6 607 aa14.4□□□□□ -0.1
CTSA-202ENST00000354880 KIRREL2Q6UWL6 708 aa14.4□□□□□ -0.1
CTSA-202ENST00000354880 DEF8Q6ZN54 512 aa14.4□□□□□ -0.1
CTSA-202ENST00000354880 TMPRSS7Q7RTY8 843 aa14.4□□□□□ -0.1
CTSA-202ENST00000354880 OR6T1Q8NGN1 323 aa14.4□□□□□ -0.1
CTSA-202ENST00000354880 OR5K1Q8NHB7 308 aa14.4□□□□□ -0.1
CTSA-202ENST00000354880 NUBPLQ8TB37 319 aa14.4□□□□□ -0.1
CTSA-202ENST00000354880 DNAJC9Q8WXX5 260 aa14.4□□□□□ -0.1
CTSA-202ENST00000354880 TP53INP1Q96A56 240 aa14.4□□□□□ -0.1
CTSA-202ENST00000354880 ARHGDIGQ99819 225 aa14.4□□□□□ -0.1
CTSA-202ENST00000354880 GPR87Q9BY21 358 aa14.4□□□□□ -0.1
CTSA-202ENST00000354880 ARMC7Q9H6L4 198 aa14.4□□□□□ -0.1
CTSA-202ENST00000354880 VNN3Q9NY84 501 aa14.4□□□□□ -0.1
CTSA-202ENST00000354880 SAMHD1Q9Y3Z3 626 aaKnown RBP14.4□□□□□ -0.1
CTSA-202ENST00000354880 TESMINQ9Y4I5 508 aa14.4□□□□□ -0.1
CTSA-202ENST00000354880 NPIPB9F8W1W9 429 aa14.39□□□□□ -0.11
CTSA-202ENST00000354880 DNAJA1P31689 397 aaKnown RBP14.39□□□□□ -0.11
CTSA-202ENST00000354880 DLSTP36957 453 aa14.39□□□□□ -0.11
CTSA-202ENST00000354880 ARHGDIAP52565 204 aa14.39□□□□□ -0.11
CTSA-202ENST00000354880 DNASE1L3Q13609 305 aa14.39□□□□□ -0.11
CTSA-202ENST00000354880 SSPNQ14714 243 aa14.39□□□□□ -0.11
CTSA-202ENST00000354880 ZNF141Q15928 474 aa14.39□□□□□ -0.11
CTSA-202ENST00000354880 BTBD16Q32M84 506 aa14.39□□□□□ -0.11
CTSA-202ENST00000354880 RNF220Q5VTB9 566 aa14.39□□□□□ -0.11
CTSA-202ENST00000354880 TMEM179BQ7Z7N9 219 aa14.39□□□□□ -0.11
CTSA-202ENST00000354880 ZNF605Q86T29 641 aa14.39□□□□□ -0.11
CTSA-202ENST00000354880 STK32CQ86UX6 486 aa14.39□□□□□ -0.11
CTSA-202ENST00000354880 CYP4Z1Q86W10 505 aa14.39□□□□□ -0.11
CTSA-202ENST00000354880 HIPK1Q86Z02 1210 aa14.39□□□□□ -0.11
CTSA-202ENST00000354880 SLC34A3Q8N130 599 aa14.39□□□□□ -0.11
CTSA-202ENST00000354880 PACRGLQ8N7B6 248 aa14.39□□□□□ -0.11
CTSA-202ENST00000354880 ZNF614Q8N883 585 aa14.39□□□□□ -0.11
CTSA-202ENST00000354880 OR11G2Q8NGC1 345 aa14.39□□□□□ -0.11
CTSA-202ENST00000354880 DIO2Q92813 273 aa14.39□□□□□ -0.11
CTSA-202ENST00000354880 SDCCAG3Q96C92 435 aa14.39□□□□□ -0.11
CTSA-202ENST00000354880 PIP5K1AQ99755 562 aa14.39□□□□□ -0.11
CTSA-202ENST00000354880 FAM117AQ9C073 453 aa14.39□□□□□ -0.11
CTSA-202ENST00000354880 LIN28AQ9H9Z2 209 aaKnown RBP14.39□□□□□ -0.11
CTSA-202ENST00000354880 C8orf4Q9NR00 106 aa14.39□□□□□ -0.11
CTSA-202ENST00000354880 DLL3Q9NYJ7 618 aa14.39□□□□□ -0.11
CTSA-202ENST00000354880 A0A1W2PQ72 361 aa14.38□□□□□ -0.11
CTSA-202ENST00000354880 CDRT15L2A8MXV6 281 aa14.38□□□□□ -0.11
CTSA-202ENST00000354880 SOCS6O14544 535 aa14.38□□□□□ -0.11
CTSA-202ENST00000354880 EI24O14681 340 aa14.38□□□□□ -0.11
CTSA-202ENST00000354880 SEMA7AO75326 666 aa14.38□□□□□ -0.11
CTSA-202ENST00000354880 RASAL1O95294 804 aa14.38□□□□□ -0.11
CTSA-202ENST00000354880 FPR1P21462 350 aa14.38□□□□□ -0.11
CTSA-202ENST00000354880 CD82P27701 267 aa14.38□□□□□ -0.11
CTSA-202ENST00000354880 ABCD3P28288 659 aa14.38□□□□□ -0.11
CTSA-202ENST00000354880 KRT20P35900 424 aa14.38□□□□□ -0.11
CTSA-202ENST00000354880 SPIBQ01892 262 aa14.38□□□□□ -0.11
CTSA-202ENST00000354880 PLCXD2Q0VAA5 305 aa14.38□□□□□ -0.11
CTSA-202ENST00000354880 GANABQ14697 944 aaKnown RBP14.38□□□□□ -0.11
CTSA-202ENST00000354880 EXT1Q16394 746 aa14.38□□□□□ -0.11
CTSA-202ENST00000354880 OTUD3Q5T2D3 398 aaPredicted RBP14.38□□□□□ -0.11
CTSA-202ENST00000354880 MRPL2Q5T653 305 aaKnown RBP14.38□□□□□ -0.11
CTSA-202ENST00000354880 SHQ1Q6PI26 577 aaKnown RBP14.38□□□□□ -0.11
CTSA-202ENST00000354880 PRR22Q8IZ63 422 aa14.38□□□□□ -0.11
CTSA-202ENST00000354880 OR5L2Q8NGL0 311 aa14.38□□□□□ -0.11
CTSA-202ENST00000354880 NACC2Q96BF6 587 aa14.38□□□□□ -0.11
CTSA-202ENST00000354880 EPYCQ99645 322 aa14.38□□□□□ -0.11
CTSA-202ENST00000354880 LRRC42Q9Y546 428 aa14.38□□□□□ -0.11
CTSA-202ENST00000354880 MAGED1Q9Y5V3 778 aaPredicted RBP14.38□□□□□ -0.11
CTSA-202ENST00000354880 LYVE1Q9Y5Y7 322 aa14.38□□□□□ -0.11
CTSA-202ENST00000354880 CDHR4A6H8M9 788 aa14.38□□□□□ -0.11
CTSA-202ENST00000354880 TERTO14746 1132 aaKnown RBP14.38□□□□□ -0.11
CTSA-202ENST00000354880 FRS3O43559 492 aa14.38□□□□□ -0.11
CTSA-202ENST00000354880 REM1O75628 298 aa14.38□□□□□ -0.11
CTSA-202ENST00000354880 ZFAND5O76080 213 aa14.38□□□□□ -0.11
CTSA-202ENST00000354880 SLC34A2O95436 690 aa14.38□□□□□ -0.11
CTSA-202ENST00000354880 IL12BP29460 328 aa14.38□□□□□ -0.11
CTSA-202ENST00000354880 OTX2P32243 289 aa14.38□□□□□ -0.11
CTSA-202ENST00000354880 CDH12P55289 794 aa14.38□□□□□ -0.11
CTSA-202ENST00000354880 NRG3P56975 720 aa14.38□□□□□ -0.11
CTSA-202ENST00000354880 RGS8P57771 180 aaPredicted RBP14.38□□□□□ -0.11
CTSA-202ENST00000354880 PLAG1Q6DJT9 500 aa14.38□□□□□ -0.11
CTSA-202ENST00000354880 TBPL2Q6SJ96 375 aa14.38□□□□□ -0.11
CTSA-202ENST00000354880 NDUFAF7Q7L592 441 aa14.38□□□□□ -0.11
CTSA-202ENST00000354880 HS3ST5Q8IZT8 346 aa14.38□□□□□ -0.11
CTSA-202ENST00000354880 OR4C3Q8NH37 302 aa14.38□□□□□ -0.11
CTSA-202ENST00000354880 ELP5Q8TE02 316 aa14.38□□□□□ -0.11
CTSA-202ENST00000354880 THAP3Q8WTV1 239 aaPredicted RBP14.38□□□□□ -0.11
CTSA-202ENST00000354880 NRBF2Q96F24 287 aa14.38□□□□□ -0.11
CTSA-202ENST00000354880 IMMP1LQ96LU5 166 aa14.38□□□□□ -0.11
CTSA-202ENST00000354880 ADOQ96SZ5 270 aa14.38□□□□□ -0.11
CTSA-202ENST00000354880 HOXD1Q9GZZ0 328 aa14.38□□□□□ -0.11
CTSA-202ENST00000354880 UBQLN4Q9NRR5 601 aa14.38□□□□□ -0.11
CTSA-202ENST00000354880 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.38□□□□□ -0.11
CTSA-202ENST00000354880 KCND3Q9UK17 655 aa14.38□□□□□ -0.11
CTSA-202ENST00000354880 ACAD8Q9UKU7 415 aa14.38□□□□□ -0.11
CTSA-202ENST00000354880 C15orf41Q9Y2V0 281 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms