RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 B3GLCTQ6Y288 498 aa9.46□□□□□ -0.89
SYNE1-203ENST00000354674 SLC46A3Q7Z3Q1 461 aa9.46□□□□□ -0.89
SYNE1-203ENST00000354674 PAQR7Q86WK9 346 aa9.46□□□□□ -0.89
SYNE1-203ENST00000354674 SFTPA2Q8IWL1 248 aa9.46□□□□□ -0.89
SYNE1-203ENST00000354674 OR8D4Q8NGM9 314 aa9.46□□□□□ -0.89
SYNE1-203ENST00000354674 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.46□□□□□ -0.89
SYNE1-203ENST00000354674 MTFMTQ96DP5 389 aaKnown RBP9.46□□□□□ -0.89
SYNE1-203ENST00000354674 CMTM7Q96FZ5 175 aa9.46□□□□□ -0.89
SYNE1-203ENST00000354674 HYLS1Q96M11 299 aa9.46□□□□□ -0.89
SYNE1-203ENST00000354674 SPHK1Q9NYA1 384 aa9.46□□□□□ -0.89
SYNE1-203ENST00000354674 ING4Q9UNL4 249 aa9.46□□□□□ -0.89
SYNE1-203ENST00000354674 NAALAD2Q9Y3Q0 740 aa9.46□□□□□ -0.89
SYNE1-203ENST00000354674 KLK4Q9Y5K2 254 aa9.46□□□□□ -0.89
SYNE1-203ENST00000354674 CSNK1G3Q9Y6M4 447 aa9.46□□□□□ -0.89
SYNE1-203ENST00000354674 DNAH14Q0VDD8 3507 aa9.46□□□□□ -0.9
SYNE1-203ENST00000354674 A0A1B0GVT2 93 aa9.46□□□□□ -0.9
SYNE1-203ENST00000354674 PIP5K1CO60331 668 aa9.46□□□□□ -0.9
SYNE1-203ENST00000354674 ADAM11O75078 769 aa9.46□□□□□ -0.9
SYNE1-203ENST00000354674 CDRT1O95170 752 aa9.46□□□□□ -0.9
SYNE1-203ENST00000354674 PEPDP12955 493 aa9.46□□□□□ -0.9
SYNE1-203ENST00000354674 DHPSP49366 369 aaPredicted RBP9.46□□□□□ -0.9
SYNE1-203ENST00000354674 CCR8P51685 355 aa9.46□□□□□ -0.9
SYNE1-203ENST00000354674 HMGCS1Q01581 520 aa9.46□□□□□ -0.9
SYNE1-203ENST00000354674 ST3GAL4Q11206 333 aa9.46□□□□□ -0.9
SYNE1-203ENST00000354674 SERTAD2Q14140 314 aa9.46□□□□□ -0.9
SYNE1-203ENST00000354674 KIR2DS3Q14952 304 aa9.46□□□□□ -0.9
SYNE1-203ENST00000354674 MAD2L1BPQ15013 274 aaPredicted RBP9.46□□□□□ -0.9
SYNE1-203ENST00000354674 NR6A1Q15406 480 aa9.46□□□□□ -0.9
SYNE1-203ENST00000354674 SHBQ15464 509 aa9.46□□□□□ -0.9
SYNE1-203ENST00000354674 HKDC1Q2TB90 917 aa9.46□□□□□ -0.9
SYNE1-203ENST00000354674 AVL9Q8NBF6 648 aa9.46□□□□□ -0.9
SYNE1-203ENST00000354674 FAM46DQ8NEK8 389 aa9.46□□□□□ -0.9
SYNE1-203ENST00000354674 OR2T12Q8NG77 320 aa9.46□□□□□ -0.9
SYNE1-203ENST00000354674 OR2L3Q8NG85 312 aa9.46□□□□□ -0.9
SYNE1-203ENST00000354674 OR4E2Q8NGC2 313 aa9.46□□□□□ -0.9
SYNE1-203ENST00000354674 OR4D10Q8NGI6 311 aa9.46□□□□□ -0.9
SYNE1-203ENST00000354674 OR52J3Q8NH60 311 aa9.46□□□□□ -0.9
SYNE1-203ENST00000354674 HUS1BQ8NHY5 278 aa9.46□□□□□ -0.9
SYNE1-203ENST00000354674 LMX1AQ8TE12 382 aa9.46□□□□□ -0.9
SYNE1-203ENST00000354674 UBE2E3Q969T4 207 aa9.46□□□□□ -0.9
SYNE1-203ENST00000354674 ZBED6CLQ96FA7 236 aaPredicted RBP9.46□□□□□ -0.9
SYNE1-203ENST00000354674 ZNF578Q96N58 590 aaPredicted RBP9.46□□□□□ -0.9
SYNE1-203ENST00000354674 CCDC32Q9BV29 185 aa9.46□□□□□ -0.9
SYNE1-203ENST00000354674 UGT2B28Q9BY64 529 aa9.46□□□□□ -0.9
SYNE1-203ENST00000354674 MED28Q9H204 178 aa9.46□□□□□ -0.9
SYNE1-203ENST00000354674 C1orf109Q9NX04 203 aa9.46□□□□□ -0.9
SYNE1-203ENST00000354674 ZSCAN32Q9NX65 697 aa9.46□□□□□ -0.9
SYNE1-203ENST00000354674 SIRT5Q9NXA8 310 aa9.46□□□□□ -0.9
SYNE1-203ENST00000354674 SUSD2Q9UGT4 822 aa9.46□□□□□ -0.9
SYNE1-203ENST00000354674 CLCA2Q9UQC9 943 aa9.46□□□□□ -0.9
SYNE1-203ENST00000354674 PCDHGB1Q9Y5G3 927 aa9.46□□□□□ -0.9
SYNE1-203ENST00000354674 KMT2EQ8IZD2 1858 aa9.45□□□□□ -0.9
SYNE1-203ENST00000354674 TRBV23OR9-2A0A075B6M9 112 aa9.45□□□□□ -0.9
SYNE1-203ENST00000354674 INMT-MINDY4F8WBC2 141 aa9.45□□□□□ -0.9
SYNE1-203ENST00000354674 ECDO95905 644 aaPredicted RBP9.45□□□□□ -0.9
SYNE1-203ENST00000354674 B3GALT4O96024 378 aa9.45□□□□□ -0.9
SYNE1-203ENST00000354674 APOC1P02654 83 aa9.45□□□□□ -0.9
SYNE1-203ENST00000354674 C1QCP02747 245 aa9.45□□□□□ -0.9
SYNE1-203ENST00000354674 GNSP15586 552 aa9.45□□□□□ -0.9
SYNE1-203ENST00000354674 MAP2K3P46734 347 aa9.45□□□□□ -0.9
SYNE1-203ENST00000354674 ZFP36L2P47974 494 aaKnown RBP9.45□□□□□ -0.9
SYNE1-203ENST00000354674 HNRNPA0Q13151 305 aaKnown RBP9.45□□□□□ -0.9
SYNE1-203ENST00000354674 MAD2L1Q13257 205 aaPredicted RBP9.45□□□□□ -0.9
SYNE1-203ENST00000354674 TSTA3Q13630 321 aaPredicted RBP9.45□□□□□ -0.9
SYNE1-203ENST00000354674 METTL11BQ5VVY1 283 aa9.45□□□□□ -0.9
SYNE1-203ENST00000354674 HIST2H2AA3Q6FI13 130 aa9.45□□□□□ -0.9
SYNE1-203ENST00000354674 ZNF605Q86T29 641 aa9.45□□□□□ -0.9
SYNE1-203ENST00000354674 KRT78Q8N1N4 520 aa9.45□□□□□ -0.9
SYNE1-203ENST00000354674 ZNF285Q96NJ3 590 aa9.45□□□□□ -0.9
SYNE1-203ENST00000354674 SRMSQ9H3Y6 488 aa9.45□□□□□ -0.9
SYNE1-203ENST00000354674 NIPAL2Q9H841 368 aa9.45□□□□□ -0.9
SYNE1-203ENST00000354674 LRTM1Q9HBL6 345 aa9.45□□□□□ -0.9
SYNE1-203ENST00000354674 SLC6A20Q9NP91 592 aa9.45□□□□□ -0.9
SYNE1-203ENST00000354674 SLC52A3Q9NQ40 469 aa9.45□□□□□ -0.9
SYNE1-203ENST00000354674 GSN-AS1Q9NRJ2 163 aa9.45□□□□□ -0.9
SYNE1-203ENST00000354674 KCMF1Q9P0J7 381 aa9.45□□□□□ -0.9
SYNE1-203ENST00000354674 SH3BP4Q9P0V3 963 aa9.45□□□□□ -0.9
SYNE1-203ENST00000354674 A0A0G2JPF8 293 aa9.45□□□□□ -0.9
SYNE1-203ENST00000354674 HNRNPCL3B7ZW38 293 aa9.45□□□□□ -0.9
SYNE1-203ENST00000354674 CCNDBP1O95273 360 aa9.45□□□□□ -0.9
SYNE1-203ENST00000354674 ALPPP05187 535 aa9.45□□□□□ -0.9
SYNE1-203ENST00000354674 SP9P0CG40 484 aa9.45□□□□□ -0.9
SYNE1-203ENST00000354674 HNRNPCL4P0DMR1 293 aa9.45□□□□□ -0.9
SYNE1-203ENST00000354674 UMPSP11172 480 aa9.45□□□□□ -0.9
SYNE1-203ENST00000354674 AMD1P17707 334 aa9.45□□□□□ -0.9
SYNE1-203ENST00000354674 AVPR2P30518 371 aa9.45□□□□□ -0.9
SYNE1-203ENST00000354674 POLR2JP52435 117 aaKnown RBP9.45□□□□□ -0.9
SYNE1-203ENST00000354674 CSNK1G2P78368 415 aa9.45□□□□□ -0.9
SYNE1-203ENST00000354674 CLINT1Q14677 625 aa9.45□□□□□ -0.9
SYNE1-203ENST00000354674 HFEQ30201 348 aa9.45□□□□□ -0.9
SYNE1-203ENST00000354674 SGO1Q5FBB7 561 aa9.45□□□□□ -0.9
SYNE1-203ENST00000354674 ADNP2Q6IQ32 1131 aa9.45□□□□□ -0.9
SYNE1-203ENST00000354674 ZNF425Q6IV72 752 aa9.45□□□□□ -0.9
SYNE1-203ENST00000354674 ENTHD1Q8IYW4 607 aa9.45□□□□□ -0.9
SYNE1-203ENST00000354674 RDH10Q8IZV5 341 aa9.45□□□□□ -0.9
SYNE1-203ENST00000354674 ZNF655Q8N720 491 aaPredicted RBP9.45□□□□□ -0.9
SYNE1-203ENST00000354674 KLHL6Q8WZ60 621 aa9.45□□□□□ -0.9
SYNE1-203ENST00000354674 SLC22A18Q96BI1 424 aa9.45□□□□□ -0.9
SYNE1-203ENST00000354674 MS4A3Q96HJ5 214 aa9.45□□□□□ -0.9
SYNE1-203ENST00000354674 RBM14Q96PK6 669 aaKnown RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms