RNA–Protein interactions for RNA: ENST00000353479.9

COL17A1-201, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL17A1, Length 5,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-201ENST00000353479 ZNF443Q9Y2A4 671 aaPredicted RBP13.99□□□□□ -0.17
COL17A1-201ENST00000353479 CMAHPQ9Y471 501 aa13.99□□□□□ -0.17
COL17A1-201ENST00000353479 CPNE6O95741 557 aa13.99□□□□□ -0.17
COL17A1-201ENST00000353479 GGT2P36268 569 aa13.99□□□□□ -0.17
COL17A1-201ENST00000353479 ACTA2P62736 377 aa13.99□□□□□ -0.17
COL17A1-201ENST00000353479 ACTG2P63267 376 aa13.99□□□□□ -0.17
COL17A1-201ENST00000353479 MFSD13AQ14CX5 517 aa13.99□□□□□ -0.17
COL17A1-201ENST00000353479 SPHARQ15513 63 aa13.99□□□□□ -0.17
COL17A1-201ENST00000353479 C4orf46Q504U0 113 aa13.99□□□□□ -0.17
COL17A1-201ENST00000353479 PIP5KL1Q5T9C9 394 aa13.99□□□□□ -0.17
COL17A1-201ENST00000353479 IL20RBQ6UXL0 311 aa13.99□□□□□ -0.17
COL17A1-201ENST00000353479 OR4K3Q96R72 315 aa13.99□□□□□ -0.17
COL17A1-201ENST00000353479 SMCHD1A6NHR9 2005 aa13.99□□□□□ -0.17
COL17A1-201ENST00000353479 SLC1A7O00341 560 aa13.99□□□□□ -0.17
COL17A1-201ENST00000353479 ACPPP15309 386 aa13.99□□□□□ -0.17
COL17A1-201ENST00000353479 GDF1P27539 372 aa13.99□□□□□ -0.17
COL17A1-201ENST00000353479 PRPS1P60891 318 aa13.99□□□□□ -0.17
COL17A1-201ENST00000353479 OR7A5Q15622 319 aa13.99□□□□□ -0.17
COL17A1-201ENST00000353479 ASTLQ6HA08 431 aaPredicted RBP13.99□□□□□ -0.17
COL17A1-201ENST00000353479 FAM111BQ6SJ93 734 aa13.99□□□□□ -0.17
COL17A1-201ENST00000353479 TSPYL5Q86VY4 417 aaPredicted RBP13.99□□□□□ -0.17
COL17A1-201ENST00000353479 ADGRG5Q8IZF4 528 aa13.99□□□□□ -0.17
COL17A1-201ENST00000353479 LRRC46Q96FV0 321 aa13.99□□□□□ -0.17
COL17A1-201ENST00000353479 POU2F3Q9UKI9 436 aa13.99□□□□□ -0.17
COL17A1-201ENST00000353479 SLITRK4Q8IW52 837 aa13.99□□□□□ -0.17
COL17A1-201ENST00000353479 C15orf40Q8WUR7 153 aa13.99□□□□□ -0.17
COL17A1-201ENST00000353479 HAVCR1Q96D42 359 aa13.99□□□□□ -0.17
COL17A1-201ENST00000353479 PRRC1Q96M27 445 aa13.99□□□□□ -0.17
COL17A1-201ENST00000353479 CCDC115Q96NT0 180 aa13.99□□□□□ -0.17
COL17A1-201ENST00000353479 ANKRD31Q8N7Z5 1873 aa13.98□□□□□ -0.17
COL17A1-201ENST00000353479 LOC100509620A0A075B734 347 aa13.98□□□□□ -0.17
COL17A1-201ENST00000353479 CD8B2A6NJW9 211 aa13.98□□□□□ -0.17
COL17A1-201ENST00000353479 CD8BP10966 210 aa13.98□□□□□ -0.17
COL17A1-201ENST00000353479 ENTPD1P49961 510 aa13.98□□□□□ -0.17
COL17A1-201ENST00000353479 ACVR1Q04771 509 aa13.98□□□□□ -0.17
COL17A1-201ENST00000353479 LTB4RQ15722 352 aa13.98□□□□□ -0.17
COL17A1-201ENST00000353479 IL17RCQ8NAC3 791 aa13.98□□□□□ -0.17
COL17A1-201ENST00000353479 PATE1Q8WXA2 126 aa13.98□□□□□ -0.17
COL17A1-201ENST00000353479 RBM24Q9BX46 236 aaKnown RBP13.98□□□□□ -0.17
COL17A1-201ENST00000353479 CHIAQ9BZP6 476 aa13.98□□□□□ -0.17
COL17A1-201ENST00000353479 SLC22A4Q9H015 551 aa13.98□□□□□ -0.17
COL17A1-201ENST00000353479 GORASP2Q9H8Y8 452 aa13.98□□□□□ -0.17
COL17A1-201ENST00000353479 H0YJX3 145 aa13.98□□□□□ -0.17
COL17A1-201ENST00000353479 ARPC4P59998 168 aa13.98□□□□□ -0.17
COL17A1-201ENST00000353479 FAM109BQ6ICB4 259 aaPredicted RBP13.98□□□□□ -0.17
COL17A1-201ENST00000353479 HMBOX1Q6NT76 420 aa13.98□□□□□ -0.17
COL17A1-201ENST00000353479 ARL14Q8N4G2 192 aa13.98□□□□□ -0.17
COL17A1-201ENST00000353479 C16orf58Q96GQ5 468 aa13.98□□□□□ -0.17
COL17A1-201ENST00000353479 UBQLN4Q9NRR5 601 aa13.98□□□□□ -0.17
COL17A1-201ENST00000353479 C2orf42Q9NWW7 574 aa13.98□□□□□ -0.17
COL17A1-201ENST00000353479 ZNF639Q9UID6 485 aa13.98□□□□□ -0.17
COL17A1-201ENST00000353479 CNOT11Q9UKZ1 510 aaKnown RBP13.98□□□□□ -0.17
COL17A1-201ENST00000353479 SULT2B1O00204 365 aa13.98□□□□□ -0.17
COL17A1-201ENST00000353479 FBP2O00757 339 aa13.98□□□□□ -0.17
COL17A1-201ENST00000353479 B3GALT4O96024 378 aa13.98□□□□□ -0.17
COL17A1-201ENST00000353479 C1orf53Q5VUE5 145 aa13.98□□□□□ -0.17
COL17A1-201ENST00000353479 OR14A16Q8NHC5 309 aa13.98□□□□□ -0.17
COL17A1-201ENST00000353479 ZDHHC5Q9C0B5 715 aa13.98□□□□□ -0.17
COL17A1-201ENST00000353479 HSPE1-MOB4S4R3N1 261 aa13.98□□□□□ -0.17
COL17A1-201ENST00000353479 ADH7P40394 386 aa13.98□□□□□ -0.17
COL17A1-201ENST00000353479 GNG2P59768 71 aa13.98□□□□□ -0.17
COL17A1-201ENST00000353479 LILRA6Q6PI73 481 aa13.98□□□□□ -0.17
COL17A1-201ENST00000353479 TRIM46Q7Z4K8 759 aa13.98□□□□□ -0.17
COL17A1-201ENST00000353479 IGFN1Q86VF2 1251 aa13.98□□□□□ -0.17
COL17A1-201ENST00000353479 SYNPOQ8N3V7 929 aa13.98□□□□□ -0.17
COL17A1-201ENST00000353479 COQ10AQ96MF6 247 aa13.98□□□□□ -0.17
COL17A1-201ENST00000353479 PCDHB16Q9NRJ7 776 aa13.98□□□□□ -0.17
COL17A1-201ENST00000353479 TBC1D24Q9ULP9 559 aa13.98□□□□□ -0.17
COL17A1-201ENST00000353479 UBE2NP61088 152 aaKnown RBP13.97□□□□□ -0.17
COL17A1-201ENST00000353479 GPR19Q15760 415 aa13.97□□□□□ -0.17
COL17A1-201ENST00000353479 SLC18B1Q6NT16 456 aa13.97□□□□□ -0.17
COL17A1-201ENST00000353479 CDH24Q86UP0 819 aa13.97□□□□□ -0.17
COL17A1-201ENST00000353479 OR8J2Q8NGG1 315 aa13.97□□□□□ -0.17
COL17A1-201ENST00000353479 ISL2Q96A47 359 aa13.97□□□□□ -0.17
COL17A1-201ENST00000353479 TMEM9Q9P0T7 183 aa13.97□□□□□ -0.17
COL17A1-201ENST00000353479 IER3IP1Q9Y5U9 82 aa13.97□□□□□ -0.17
COL17A1-201ENST00000353479 POLR2AP24928 1970 aaKnown RBP13.97□□□□□ -0.17
COL17A1-201ENST00000353479 HMX2A2RU54 273 aa13.97□□□□□ -0.17
COL17A1-201ENST00000353479 AREL1O15033 823 aa13.97□□□□□ -0.17
COL17A1-201ENST00000353479 FURINP09958 794 aa13.97□□□□□ -0.17
COL17A1-201ENST00000353479 OPRD1P41143 372 aa13.97□□□□□ -0.17
COL17A1-201ENST00000353479 ZNF791Q3KP31 576 aaPredicted RBP13.97□□□□□ -0.17
COL17A1-201ENST00000353479 ENTPD8Q5MY95 495 aa13.97□□□□□ -0.17
COL17A1-201ENST00000353479 C22orf42Q6IC83 251 aa13.97□□□□□ -0.17
COL17A1-201ENST00000353479 CPOQ8IVL8 374 aa13.97□□□□□ -0.17
COL17A1-201ENST00000353479 OR13C3Q8NGS6 347 aa13.97□□□□□ -0.17
COL17A1-201ENST00000353479 ISOC1Q96CN7 298 aa13.97□□□□□ -0.17
COL17A1-201ENST00000353479 SLC7A11Q9UPY5 501 aa13.97□□□□□ -0.17
COL17A1-201ENST00000353479 OR5K3A6NET4 321 aa13.97□□□□□ -0.17
COL17A1-201ENST00000353479 PLATP00750 562 aa13.97□□□□□ -0.17
COL17A1-201ENST00000353479 SLC5A2P31639 672 aa13.97□□□□□ -0.17
COL17A1-201ENST00000353479 TRAM1Q15629 374 aa13.97□□□□□ -0.17
COL17A1-201ENST00000353479 FRMD1Q8N878 549 aa13.97□□□□□ -0.17
COL17A1-201ENST00000353479 TM4SF18Q96CE8 201 aa13.97□□□□□ -0.17
COL17A1-201ENST00000353479 CSNK1G3Q9Y6M4 447 aa13.97□□□□□ -0.17
COL17A1-201ENST00000353479 J3QRK9 145 aa13.97□□□□□ -0.17
COL17A1-201ENST00000353479 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.97□□□□□ -0.17
COL17A1-201ENST00000353479 SPIN3Q5JUX0 258 aa13.97□□□□□ -0.17
COL17A1-201ENST00000353479 NKAPLQ5M9Q1 402 aa13.97□□□□□ -0.17
COL17A1-201ENST00000353479 ULK3Q6PHR2 472 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms