RNA–Protein interactions for RNA: ENST00000349225.2

RLIM-202, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RLIM, Length 3,478 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-202ENST00000349225 EXOGQ9Y2C4 368 aaKnown RBP13.34□□□□□ -0.27
RLIM-202ENST00000349225 HMGN4O00479 90 aa13.34□□□□□ -0.27
RLIM-202ENST00000349225 TGFB1P01137 390 aa13.34□□□□□ -0.27
RLIM-202ENST00000349225 S100A11P31949 105 aa13.34□□□□□ -0.27
RLIM-202ENST00000349225 TRIM23P36406 574 aa13.34□□□□□ -0.27
RLIM-202ENST00000349225 HACD4Q5VWC8 232 aa13.34□□□□□ -0.27
RLIM-202ENST00000349225 FAAP20Q6NZ36 180 aa13.34□□□□□ -0.27
RLIM-202ENST00000349225 SLC27A4Q6P1M0 643 aa13.34□□□□□ -0.27
RLIM-202ENST00000349225 ZNF280BQ86YH2 543 aa13.34□□□□□ -0.27
RLIM-202ENST00000349225 OR52N1Q8NH53 320 aa13.34□□□□□ -0.27
RLIM-202ENST00000349225 NEIL2Q969S2 332 aa13.34□□□□□ -0.27
RLIM-202ENST00000349225 NXPE3Q969Y0 559 aa13.34□□□□□ -0.27
RLIM-202ENST00000349225 CXorf40BQ96DE9 158 aa13.34□□□□□ -0.27
RLIM-202ENST00000349225 TEX10Q9NXF1 929 aaPredicted RBP13.34□□□□□ -0.27
RLIM-202ENST00000349225 CLDN11O75508 207 aa13.34□□□□□ -0.27
RLIM-202ENST00000349225 RLN2P04090 185 aa13.34□□□□□ -0.27
RLIM-202ENST00000349225 RECQLP46063 649 aaPredicted RBP13.34□□□□□ -0.27
RLIM-202ENST00000349225 SHC2P98077 582 aa13.34□□□□□ -0.27
RLIM-202ENST00000349225 OC90Q02509 493 aaPredicted RBP13.34□□□□□ -0.27
RLIM-202ENST00000349225 FGL1Q08830 312 aa13.34□□□□□ -0.27
RLIM-202ENST00000349225 B3GNTL1Q67FW5 361 aaPredicted RBP13.34□□□□□ -0.27
RLIM-202ENST00000349225 LILRA3Q8N6C8 439 aaPredicted RBP13.34□□□□□ -0.27
RLIM-202ENST00000349225 OR13C5Q8NGS8 318 aa13.34□□□□□ -0.27
RLIM-202ENST00000349225 SLC25A28Q96A46 364 aa13.34□□□□□ -0.27
RLIM-202ENST00000349225 RGMAQ96B86 450 aa13.34□□□□□ -0.27
RLIM-202ENST00000349225 A4GALTQ9NPC4 353 aa13.34□□□□□ -0.27
RLIM-202ENST00000349225 GKN1Q9NS71 199 aa13.34□□□□□ -0.27
RLIM-202ENST00000349225 ZDHHC3Q9NYG2 299 aa13.34□□□□□ -0.27
RLIM-202ENST00000349225 A0A087WUU8 490 aa13.33□□□□□ -0.27
RLIM-202ENST00000349225 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.33□□□□□ -0.27
RLIM-202ENST00000349225 C17orf102A2RUQ5 167 aa13.33□□□□□ -0.27
RLIM-202ENST00000349225 FAM183AA6NL82 134 aa13.33□□□□□ -0.27
RLIM-202ENST00000349225 SGTAO43765 313 aa13.33□□□□□ -0.27
RLIM-202ENST00000349225 UBL3O95164 117 aa13.33□□□□□ -0.27
RLIM-202ENST00000349225 HSD3B2P26439 372 aa13.33□□□□□ -0.27
RLIM-202ENST00000349225 GDNFP39905 211 aa13.33□□□□□ -0.27
RLIM-202ENST00000349225 MEOX2P50222 304 aa13.33□□□□□ -0.27
RLIM-202ENST00000349225 CCR8P51685 355 aa13.33□□□□□ -0.27
RLIM-202ENST00000349225 S100A12P80511 92 aa13.33□□□□□ -0.27
RLIM-202ENST00000349225 ZNF177Q13360 481 aaPredicted RBP13.33□□□□□ -0.27
RLIM-202ENST00000349225 CSRP2Q16527 193 aa13.33□□□□□ -0.27
RLIM-202ENST00000349225 SYPL1Q16563 259 aa13.33□□□□□ -0.27
RLIM-202ENST00000349225 HECTD3Q5T447 861 aa13.33□□□□□ -0.27
RLIM-202ENST00000349225 TMEM88Q6PEY1 159 aa13.33□□□□□ -0.27
RLIM-202ENST00000349225 C17orf47Q8NEP4 570 aa13.33□□□□□ -0.27
RLIM-202ENST00000349225 OR5M9Q8NGP3 310 aa13.33□□□□□ -0.27
RLIM-202ENST00000349225 GNPDA2Q8TDQ7 276 aa13.33□□□□□ -0.27
RLIM-202ENST00000349225 KCTD12Q96CX2 325 aaKnown RBP13.33□□□□□ -0.27
RLIM-202ENST00000349225 TBX5Q99593 518 aa13.33□□□□□ -0.27
RLIM-202ENST00000349225 PRM3Q9NNZ6 103 aa13.33□□□□□ -0.27
RLIM-202ENST00000349225 SLC6A20Q9NP91 592 aa13.33□□□□□ -0.27
RLIM-202ENST00000349225 CTSFQ9UBX1 484 aa13.33□□□□□ -0.27
RLIM-202ENST00000349225 KCNK7Q9Y2U2 307 aa13.33□□□□□ -0.27
RLIM-202ENST00000349225 ARPC1BO15143 372 aaKnown RBP13.33□□□□□ -0.28
RLIM-202ENST00000349225 OR2A4O95047 310 aa13.33□□□□□ -0.28
RLIM-202ENST00000349225 IL3P08700 152 aa13.33□□□□□ -0.28
RLIM-202ENST00000349225 ATF1P18846 271 aa13.33□□□□□ -0.28
RLIM-202ENST00000349225 ERVK-25P63136 954 aa13.33□□□□□ -0.28
RLIM-202ENST00000349225 MRPS6P82932 125 aaKnown RBP13.33□□□□□ -0.28
RLIM-202ENST00000349225 CAMK1Q14012 370 aa13.33□□□□□ -0.28
RLIM-202ENST00000349225 ZNF528Q3MIS6 628 aa13.33□□□□□ -0.28
RLIM-202ENST00000349225 TMPRSS11BQ86T26 416 aa13.33□□□□□ -0.28
RLIM-202ENST00000349225 WFDC5Q8TCV5 224 aa13.33□□□□□ -0.28
RLIM-202ENST00000349225 SP7Q8TDD2 431 aaPredicted RBP13.33□□□□□ -0.28
RLIM-202ENST00000349225 NSMAFQ92636 917 aa13.33□□□□□ -0.28
RLIM-202ENST00000349225 OR2A7Q96R45 310 aa13.33□□□□□ -0.28
RLIM-202ENST00000349225 NKX6-2Q9C056 277 aaPredicted RBP13.33□□□□□ -0.28
RLIM-202ENST00000349225 PCDHB8Q9UN66 801 aa13.33□□□□□ -0.28
RLIM-202ENST00000349225 RCE1Q9Y256 329 aa13.33□□□□□ -0.28
RLIM-202ENST00000349225 SLC6A5Q9Y345 797 aa13.33□□□□□ -0.28
RLIM-202ENST00000349225 PCDHGA5Q9Y5G8 931 aa13.33□□□□□ -0.28
RLIM-202ENST00000349225 MID1O15344 667 aa13.33□□□□□ -0.28
RLIM-202ENST00000349225 FGF18O76093 207 aa13.33□□□□□ -0.28
RLIM-202ENST00000349225 HMGN1P05114 100 aa13.33□□□□□ -0.28
RLIM-202ENST00000349225 ANXA7P20073 488 aaKnown RBP13.33□□□□□ -0.28
RLIM-202ENST00000349225 GALP22466 123 aa13.33□□□□□ -0.28
RLIM-202ENST00000349225 SEC61A1P61619 476 aaKnown RBP13.33□□□□□ -0.28
RLIM-202ENST00000349225 LYPLAL1Q5VWZ2 237 aa13.33□□□□□ -0.28
RLIM-202ENST00000349225 AGTRAPQ6RW13 159 aa13.33□□□□□ -0.28
RLIM-202ENST00000349225 OR52B4Q8NGK2 314 aa13.33□□□□□ -0.28
RLIM-202ENST00000349225 TINF2Q9BSI4 451 aa13.33□□□□□ -0.28
RLIM-202ENST00000349225 BARX1Q9HBU1 254 aaPredicted RBP13.33□□□□□ -0.28
RLIM-202ENST00000349225 HRASLSQ9HDD0 168 aa13.33□□□□□ -0.28
RLIM-202ENST00000349225 NANSQ9NR45 359 aa13.33□□□□□ -0.28
RLIM-202ENST00000349225 C5AR2Q9P296 337 aa13.33□□□□□ -0.28
RLIM-202ENST00000349225 STOX2Q9P2F5 926 aaPredicted RBP13.33□□□□□ -0.28
RLIM-202ENST00000349225 ENTPD4Q9Y227 616 aa13.33□□□□□ -0.28
RLIM-202ENST00000349225 IRGMA1A4Y4 181 aa13.32□□□□□ -0.28
RLIM-202ENST00000349225 OR6C75A6NL08 312 aa13.32□□□□□ -0.28
RLIM-202ENST00000349225 C5orf58C9J3I9 102 aa13.32□□□□□ -0.28
RLIM-202ENST00000349225 SURF4O15260 269 aa13.32□□□□□ -0.28
RLIM-202ENST00000349225 KLK1P06870 262 aa13.32□□□□□ -0.28
RLIM-202ENST00000349225 H2BFSP57053 126 aa13.32□□□□□ -0.28
RLIM-202ENST00000349225 MEF2AQ02078 507 aaPredicted RBP13.32□□□□□ -0.28
RLIM-202ENST00000349225 SLC25A25Q6KCM7 469 aa13.32□□□□□ -0.28
RLIM-202ENST00000349225 ZNF600Q6ZNG1 722 aa13.32□□□□□ -0.28
RLIM-202ENST00000349225 FAM98AQ8NCA5 519 aaKnown RBP13.32□□□□□ -0.28
RLIM-202ENST00000349225 TREX2Q9BQ50 279 aaPredicted RBP13.32□□□□□ -0.28
RLIM-202ENST00000349225 TMPRSS13Q9BYE2 586 aa13.32□□□□□ -0.28
RLIM-202ENST00000349225 IRAK3Q9Y616 596 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms